BLASTX nr result

ID: Cnidium21_contig00019280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019280
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632113.1| PREDICTED: uncharacterized protein LOC100853...    69   4e-10
emb|CBI16337.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002330022.1| chromatin remodeling complex subunit [Populu...    62   4e-08
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    61   8e-08
ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2...    57   1e-06

>ref|XP_003632113.1| PREDICTED: uncharacterized protein LOC100853935 [Vitis vinifera]
          Length = 255

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = -1

Query: 187 PAASQHST--PPLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPAPHLQA 14
           PAA   +T  PP+Q+V  S+ALFSS PTRP  I+PI P  GN +VGS+   RAPAPHLQ 
Sbjct: 61  PAAVPQTTVPPPVQVVHHSSALFSSVPTRPLHISPITPPTGNHQVGSD--IRAPAPHLQP 118

Query: 13  FR 8
           FR
Sbjct: 119 FR 120


>emb|CBI16337.3| unnamed protein product [Vitis vinifera]
          Length = 805

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = -1

Query: 187 PAASQHST--PPLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPAPHLQA 14
           PAA   +T  PP+Q+V  S+ALFSS PTRP  I+PI P  GN +VGS+   RAPAPHLQ 
Sbjct: 611 PAAVPQTTVPPPVQVVHHSSALFSSVPTRPLHISPITPPTGNHQVGSD--IRAPAPHLQP 668

Query: 13  FR 8
           FR
Sbjct: 669 FR 670


>ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871447|gb|EEF08578.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1441

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 7/67 (10%)
 Frame = -1

Query: 187  PAASQHSTP-------PLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPA 29
            PA S  +TP       P+Q V  SA LFS+TPTRPP I+ I+P+  NL+VG+E   RAPA
Sbjct: 1217 PAVSLQTTPTSSLPAPPVQAVHCSA-LFSATPTRPPHISSISPTTSNLQVGTE--IRAPA 1273

Query: 28   PHLQAFR 8
            PHLQ FR
Sbjct: 1274 PHLQHFR 1280


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
 Frame = -1

Query: 187  PAASQHSTP-------PLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPA 29
            PAAS  +TP       P Q+V  S   FSST TRPP I+ I+P+  NLR+G  N  RAPA
Sbjct: 2105 PAASLQTTPTSSPPAPPRQVVHSSGR-FSSTSTRPPHISSISPATSNLRIG--NEIRAPA 2161

Query: 28   PHLQAFR 8
            PHLQ FR
Sbjct: 2162 PHLQHFR 2168


>ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1|
            mom(plant), putative [Ricinus communis]
          Length = 1982

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/57 (52%), Positives = 34/57 (59%)
 Frame = -1

Query: 178  SQHSTPPLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPAPHLQAFR 8
            S HST  L     S    S   TRPP IN I+P+ GNL++GSE   R PAPHLQ FR
Sbjct: 1796 SAHSTSSLHAAHHSPGHLSGNLTRPPHINNISPATGNLQIGSE--IRCPAPHLQPFR 1850


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