BLASTX nr result
ID: Cnidium21_contig00019280
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00019280 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632113.1| PREDICTED: uncharacterized protein LOC100853... 69 4e-10 emb|CBI16337.3| unnamed protein product [Vitis vinifera] 69 4e-10 ref|XP_002330022.1| chromatin remodeling complex subunit [Populu... 62 4e-08 ref|XP_002318937.1| chromatin remodeling complex subunit [Populu... 61 8e-08 ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2... 57 1e-06 >ref|XP_003632113.1| PREDICTED: uncharacterized protein LOC100853935 [Vitis vinifera] Length = 255 Score = 68.9 bits (167), Expect = 4e-10 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 2/62 (3%) Frame = -1 Query: 187 PAASQHST--PPLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPAPHLQA 14 PAA +T PP+Q+V S+ALFSS PTRP I+PI P GN +VGS+ RAPAPHLQ Sbjct: 61 PAAVPQTTVPPPVQVVHHSSALFSSVPTRPLHISPITPPTGNHQVGSD--IRAPAPHLQP 118 Query: 13 FR 8 FR Sbjct: 119 FR 120 >emb|CBI16337.3| unnamed protein product [Vitis vinifera] Length = 805 Score = 68.9 bits (167), Expect = 4e-10 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 2/62 (3%) Frame = -1 Query: 187 PAASQHST--PPLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPAPHLQA 14 PAA +T PP+Q+V S+ALFSS PTRP I+PI P GN +VGS+ RAPAPHLQ Sbjct: 611 PAAVPQTTVPPPVQVVHHSSALFSSVPTRPLHISPITPPTGNHQVGSD--IRAPAPHLQP 668 Query: 13 FR 8 FR Sbjct: 669 FR 670 >ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222871447|gb|EEF08578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1441 Score = 62.4 bits (150), Expect = 4e-08 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 7/67 (10%) Frame = -1 Query: 187 PAASQHSTP-------PLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPA 29 PA S +TP P+Q V SA LFS+TPTRPP I+ I+P+ NL+VG+E RAPA Sbjct: 1217 PAVSLQTTPTSSLPAPPVQAVHCSA-LFSATPTRPPHISSISPTTSNLQVGTE--IRAPA 1273 Query: 28 PHLQAFR 8 PHLQ FR Sbjct: 1274 PHLQHFR 1280 >ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857313|gb|EEE94860.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2283 Score = 61.2 bits (147), Expect = 8e-08 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 7/67 (10%) Frame = -1 Query: 187 PAASQHSTP-------PLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPA 29 PAAS +TP P Q+V S FSST TRPP I+ I+P+ NLR+G N RAPA Sbjct: 2105 PAASLQTTPTSSPPAPPRQVVHSSGR-FSSTSTRPPHISSISPATSNLRIG--NEIRAPA 2161 Query: 28 PHLQAFR 8 PHLQ FR Sbjct: 2162 PHLQHFR 2168 >ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1| mom(plant), putative [Ricinus communis] Length = 1982 Score = 57.4 bits (137), Expect = 1e-06 Identities = 30/57 (52%), Positives = 34/57 (59%) Frame = -1 Query: 178 SQHSTPPLQIVQQSAALFSSTPTRPPQINPINPSMGNLRVGSENRARAPAPHLQAFR 8 S HST L S S TRPP IN I+P+ GNL++GSE R PAPHLQ FR Sbjct: 1796 SAHSTSSLHAAHHSPGHLSGNLTRPPHINNISPATGNLQIGSE--IRCPAPHLQPFR 1850