BLASTX nr result

ID: Cnidium21_contig00019211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019211
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||H85073 probable transposon protein [imported] - Arabidopsis...    72   7e-11
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    70   3e-10
dbj|BAB02100.1| unnamed protein product [Arabidopsis thaliana]         68   1e-09
ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [S...    66   4e-09
ref|XP_003328374.1| hAT family dimerization domain-containing pr...    66   5e-09

>pir||H85073 probable transposon protein [imported] - Arabidopsis thaliana
           gi|5032279|gb|AAD38227.1|AF147264_10 may be a pseudogene
           [Arabidopsis thaliana] gi|7267351|emb|CAB81124.1|
           putative transposon protein [Arabidopsis thaliana]
          Length = 483

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 11/112 (9%)
 Frame = +2

Query: 236 MNQLIQKKSPIKNAIVLKGK--HLKLGSRSKNFLLELTV---------C*ESVKYIKGSQ 382
           M ++++ +  +++ ++ KG+  H++  +   N ++++ +           ES+KY+KGS+
Sbjct: 136 MQEIVKSQLVLRDDLLCKGEFFHVRCATHILNIIVQIGLKGIGDTLEKIRESIKYVKGSE 195

Query: 383 GRKEKFKECIEQVALDKSRGLRQDVPTRWNSTFLMLDSALHYRRAFMKLEVM 538
            R+  F +C+E V ++   GL  DV  RWNSTF MLD AL YR AF  L+V+
Sbjct: 196 HREILFAKCMENVGINLKAGLLLDVANRWNSTFKMLDRALKYRAAFGNLKVI 247


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 13/113 (11%)
 Frame = +2

Query: 272  NAIVLKGKHLKL-------------GSRSKNFLLELTVC*ESVKYIKGSQGRKEKFKECI 412
            N+  LKG+HL +             G +SK+    ++    +V+Y++GS  R ++FK CI
Sbjct: 1200 NSHPLKGEHLHVRCCAHILNLVVGDGLKSKDMHSSISKIRNAVRYVRGSASRLDRFKICI 1259

Query: 413  EQVALDKSRGLRQDVPTRWNSTFLMLDSALHYRRAFMKLEVMGILWKHLSGAL 571
            ++  +     ++ D PTRWNST+LML+SAL +++AF +L    + +  L G +
Sbjct: 1260 KEARIQDKSTVQYDCPTRWNSTYLMLESALKFQKAFKRLGEKCVEYAMLEGGV 1312


>dbj|BAB02100.1| unnamed protein product [Arabidopsis thaliana]
          Length = 463

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/70 (45%), Positives = 45/70 (64%)
 Frame = +2

Query: 353 ESVKYIKGSQGRKEKFKECIEQVALDKSRGLRQDVPTRWNSTFLMLDSALHYRRAFMKLE 532
           ESV+++K S+ RK+ F  C+E V +    GL  DVPTRWNST+ ML  AL +R+AF  L+
Sbjct: 325 ESVRFVKASESRKDAFAACVESVGIRSGAGLSLDVPTRWNSTYDMLARALKFRKAFASLK 384

Query: 533 VMGILWKHLS 562
                +K L+
Sbjct: 385 ECDRNYKSLT 394


>ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [Sorghum bicolor]
           gi|241927612|gb|EES00757.1| hypothetical protein
           SORBIDRAFT_03g015311 [Sorghum bicolor]
          Length = 558

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/60 (51%), Positives = 42/60 (70%)
 Frame = +2

Query: 353 ESVKYIKGSQGRKEKFKECIEQVALDKSRGLRQDVPTRWNSTFLMLDSALHYRRAFMKLE 532
           +SVKYI+ SQ RK++F+E I Q+ +   +    DVPTRWNST+LML SA+ YR  F  +E
Sbjct: 231 DSVKYIRSSQARKQRFEEIIVQLGISCDKRPSLDVPTRWNSTYLMLKSAIEYRAVFDVME 290


>ref|XP_003328374.1| hAT family dimerization domain-containing protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
           gi|331245610|ref|XP_003335441.1| hAT family dimerization
           domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 701

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
 Frame = +2

Query: 269 KNAIVLKGK--HLKLGSRSKNFLLE---------LTVC*ESVKYIKGSQGRKEKFKECIE 415
           +NA+ L GK  H++  +   N +++         +T   ESV+YIK +  RK+ F E I+
Sbjct: 322 QNALELDGKFFHVRCAAHIVNLIVKDGLKIISEGITKIRESVRYIKSTPSRKQAFNEAIK 381

Query: 416 QVALDKSRGLRQDVPTRWNSTFLMLDSALHYRRAFMKL 529
              L K      DVPTRWNST+LML SAL Y+ AF  L
Sbjct: 382 LTKLKKQALPSIDVPTRWNSTYLMLKSALPYKEAFENL 419


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