BLASTX nr result

ID: Cnidium21_contig00019172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019172
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containin...   380   e-103
ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containin...   362   1e-97
ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin...   360   4e-97
ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycin...   356   5e-96
ref|XP_002533458.1| conserved hypothetical protein [Ricinus comm...   356   5e-96

>ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
            vinifera] gi|147768909|emb|CAN75883.1| hypothetical
            protein VITISV_024456 [Vitis vinifera]
          Length = 296

 Score =  380 bits (976), Expect = e-103
 Identities = 190/294 (64%), Positives = 223/294 (75%), Gaps = 9/294 (3%)
 Frame = -1

Query: 1004 GRKRGRQD--AVWNGAPKRSRDEMDSFGTGVGSKSKPCMKFFSTSGCQFGEGCHFLHYVP 831
            G++RGR D  A  NG  K+S+ E +SF TG+GSKSKPC KFFSTSGC FGEGCHFLHYVP
Sbjct: 5    GKRRGRPDGAAFGNGGFKKSKQETESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVP 64

Query: 830  GGFSALGQMGNMG------PGARKP-APPAYADGPASAIKTKLCNQINTPEGCKFGDKCR 672
            GG+SA+ QM N+G      P AR P APP   DGP + +KT++CN+ NTPEGCKFGDKC 
Sbjct: 65   GGYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDGPPT-VKTRICNKFNTPEGCKFGDKCH 123

Query: 671  FAHSEMELGRPGFPGYEDPRAMRPPMGSYGGRVEPSPPGLXXXXXXXXXXXAKISIDASL 492
            FAH E+ELGRP  P +EDPRAM P  G   GR+E  PPGL           AKIS+DASL
Sbjct: 124  FAHGELELGRPIVPTHEDPRAMGPMGGRLAGRLEAPPPGLAAAASFGASATAKISVDASL 183

Query: 491  AGAVIGKGGVNSKQICRMTGVKFAIRDHDTDPNQKNVELEGNFEQIKDASGMVRELIMRI 312
            AGA+IGKGGVNSKQICR+TGVK +I++H++DPNQ+N+ELEG F+QIK AS MVRELI  I
Sbjct: 184  AGAIIGKGGVNSKQICRLTGVKLSIKEHESDPNQRNIELEGTFDQIKQASAMVRELIFNI 243

Query: 311  GATARGPARNPMAMPGQAPPASNFKTKVCENFTKGSCTFGDRCHFAHGAEELRK 150
            G+ A G A+NP    G A  A+NFKTK+C+NF KGSCTFGDRCHFAHGA ELRK
Sbjct: 244  GSAA-GHAKNP---TGSAASANNFKTKMCDNFAKGSCTFGDRCHFAHGANELRK 293


>ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
            [Glycine max]
          Length = 297

 Score =  362 bits (928), Expect = 1e-97
 Identities = 183/294 (62%), Positives = 212/294 (72%), Gaps = 10/294 (3%)
 Frame = -1

Query: 1001 RKRGRQDAVWN--GAPKRSRDEMDSFGTGVGSKSKPCMKFFSTSGCQFGEGCHFLHYVPG 828
            RKRGR +A +N  G  K+SR EMDSF TG+GSKSKPC KFFSTSGC FGEGCHFLHYVPG
Sbjct: 3    RKRGRHEAAFNFNGGAKKSRPEMDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 62

Query: 827  GFSALGQMGNMGPG------ARKPAPPAYADGPAS-AIKTKLCNQINTPEGCKFGDKCRF 669
            GF A+ Q+ N+G         R P PP++ DG +   +KT+LCN+ NT EGCKFGDKC F
Sbjct: 63   GFKAVSQLINVGSNPVIPQVGRNPVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDKCHF 122

Query: 668  AHSEMELGRPGFPGYEDPRAM-RPPMGSYGGRVEPSPPGLXXXXXXXXXXXAKISIDASL 492
            AH E ELGRP  P YEDPR M + P    GGRVEP  P             AKISI+ASL
Sbjct: 123  AHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISINASL 182

Query: 491  AGAVIGKGGVNSKQICRMTGVKFAIRDHDTDPNQKNVELEGNFEQIKDASGMVRELIMRI 312
            AGAVIGK GVNSKQICR+TG K +IRDHDTDPN +N+ELEG+F+QIK AS MV E+I+ +
Sbjct: 183  AGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMVHEVILNV 242

Query: 311  GATARGPARNPMAMPGQAPPASNFKTKVCENFTKGSCTFGDRCHFAHGAEELRK 150
             ++A GP          A PASNFKTK+CENF KGSCTFG+RCHFAHG +ELRK
Sbjct: 243  -SSASGPPMKSFTSQNSA-PASNFKTKLCENFAKGSCTFGERCHFAHGNDELRK 294


>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like [Vitis
            vinifera]
          Length = 301

 Score =  360 bits (924), Expect = 4e-97
 Identities = 187/301 (62%), Positives = 221/301 (73%), Gaps = 13/301 (4%)
 Frame = -1

Query: 1013 MEFG--RKRGRQDAVWNGAP--KRSRDEMDSFGTGVGSKSKPCMKFFSTSGCQFGEGCHF 846
            ME G  RKRGRQ+   NG    K+S+ EM+SF +G+GSKSKPC KFFSTSGC FGEGCHF
Sbjct: 1    MELGGARKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHF 60

Query: 845  LHYVPGGFSALGQMGNMG------PGARKPA-PPAYADGPAS-AIKTKLCNQINTPEGCK 690
            LHYVPGG  A+ QM N+G      P AR PA PP++ DG +  A+KT+LCN+ N+ EGCK
Sbjct: 61   LHYVPGGIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGCK 120

Query: 689  FGDKCRFAHSEMELGRPGFPGY-EDPRAMRPPMGSYGGRVEPSPPGLXXXXXXXXXXXAK 513
            FGDKC FAH E ELG+P  P + ED R M    G   GR+EP PPGL           AK
Sbjct: 121  FGDKCHFAHGEWELGKPTLPSHHEDHRGMGS--GRLAGRLEPPPPGLAAAASFGASATAK 178

Query: 512  ISIDASLAGAVIGKGGVNSKQICRMTGVKFAIRDHDTDPNQKNVELEGNFEQIKDASGMV 333
            IS+DASLAGA+IGK GVNSKQICR+TG K +I+DHD+DPN +N+ELEG F+QIK AS MV
Sbjct: 179  ISVDASLAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELEGTFDQIKQASAMV 238

Query: 332  RELIMRIGATARGPARNPMAMPGQAPPASNFKTKVCENFTKGSCTFGDRCHFAHGAEELR 153
            RELI+ I + +  P RNP AM   A  A+NFKTK+CENFTKGSCTFG+RCHFAHGA+ELR
Sbjct: 239  RELIVNISSASGPPMRNP-AMQASA-AANNFKTKLCENFTKGSCTFGERCHFAHGADELR 296

Query: 152  K 150
            K
Sbjct: 297  K 297


>ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycine max]
            gi|255636715|gb|ACU18693.1| unknown [Glycine max]
          Length = 297

 Score =  356 bits (914), Expect = 5e-96
 Identities = 180/294 (61%), Positives = 210/294 (71%), Gaps = 10/294 (3%)
 Frame = -1

Query: 1001 RKRGRQDAVWN--GAPKRSRDEMDSFGTGVGSKSKPCMKFFSTSGCQFGEGCHFLHYVPG 828
            RKRGR +A +N  G  K+SR E DSF TG+GSKSKPC KFFSTSGC FGEGCHFLHYVPG
Sbjct: 3    RKRGRPEAAFNFNGGAKKSRPETDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 62

Query: 827  GFSALGQMGNMGPG------ARKPAPPAYADGPAS-AIKTKLCNQINTPEGCKFGDKCRF 669
            GF A+ Q+ N+G         R P PP++ DG +   +KT+LCN+ NT EGCKFGDKC F
Sbjct: 63   GFKAVSQLINVGSNPVTPQVGRNPVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDKCHF 122

Query: 668  AHSEMELGRPGFPGYEDPRAM-RPPMGSYGGRVEPSPPGLXXXXXXXXXXXAKISIDASL 492
            AH E ELGRP  P YEDPR + + P    GGRVEP  P             AKISI+ASL
Sbjct: 123  AHGEWELGRPTAPSYEDPRVLGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISINASL 182

Query: 491  AGAVIGKGGVNSKQICRMTGVKFAIRDHDTDPNQKNVELEGNFEQIKDASGMVRELIMRI 312
            AGAVIGK GVNSKQICR+TG K +IRDHDTDPN +N+ELEG+F+QIK AS MV E+I+ +
Sbjct: 183  AGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMVHEVILNV 242

Query: 311  GATARGPARNPMAMPGQAPPASNFKTKVCENFTKGSCTFGDRCHFAHGAEELRK 150
             ++A GP          A P SNFKTK+CENF KGSCTFG+RCHFAHG +ELRK
Sbjct: 243  -SSASGPPMKSFTSQTSA-PTSNFKTKLCENFAKGSCTFGERCHFAHGTDELRK 294


>ref|XP_002533458.1| conserved hypothetical protein [Ricinus communis]
            gi|223526691|gb|EEF28927.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 295

 Score =  356 bits (914), Expect = 5e-96
 Identities = 181/291 (62%), Positives = 211/291 (72%), Gaps = 7/291 (2%)
 Frame = -1

Query: 1001 RKRGRQDAVWNGAPKRSRDEMDSFGTGVGSKSKPCMKFFSTSGCQFGEGCHFLHYVPGGF 822
            RKRGR D   NG  K+SR EMDSF TGVGSKSKPC KFFST+GC FGE CHFLHYVPGG+
Sbjct: 5    RKRGRNDFNVNGGFKKSRKEMDSFSTGVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGY 64

Query: 821  SALGQMGNMGPGA-----RKPAP-PAYADGPA-SAIKTKLCNQINTPEGCKFGDKCRFAH 663
            +A+ QM N+GP         PAP PA  +G A SA+K++LCN+ NT EGCKFGDKC FAH
Sbjct: 65   NAVAQMMNLGPAVTSIPRNMPAPSPAIPNGSAPSAVKSRLCNKYNTAEGCKFGDKCNFAH 124

Query: 662  SEMELGRPGFPGYEDPRAMRPPMGSYGGRVEPSPPGLXXXXXXXXXXXAKISIDASLAGA 483
             E ELG+P  P ++DPRA     G  GGR+EP PPG            AKIS++ASLAGA
Sbjct: 125  GEWELGKPVVPSHDDPRAFGTIPGRMGGRMEPPPPG--SAASFGASATAKISVEASLAGA 182

Query: 482  VIGKGGVNSKQICRMTGVKFAIRDHDTDPNQKNVELEGNFEQIKDASGMVRELIMRIGAT 303
            +IGKGGVNSKQICR TG K +IR+H+TDPN +N+E EG+FEQIK AS MV ELI  I ++
Sbjct: 183  IIGKGGVNSKQICRQTGAKLSIREHETDPNVRNIEFEGSFEQIKQASAMVSELIASI-SS 241

Query: 302  ARGPARNPMAMPGQAPPASNFKTKVCENFTKGSCTFGDRCHFAHGAEELRK 150
            A   A+    + G   P SNFKTK+CENF+KGSCTFG RCHFAHGA ELRK
Sbjct: 242  ANASAKATGLIGGHGHPGSNFKTKLCENFSKGSCTFGQRCHFAHGAAELRK 292


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