BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019166
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   267   4e-69
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   266   6e-69
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   247   5e-63
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   246   1e-62
ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2...   234   3e-59

>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  267 bits (683), Expect = 4e-69
 Identities = 172/412 (41%), Positives = 231/412 (56%), Gaps = 39/412 (9%)
 Frame = -1

Query: 1220 ITVFGMDTFSCLEPISLCISGGCKLDGFLSKSGHGSGRYMSDRQFFFVNGRPVDMPKVGK 1041
            ITVFGM+TF+CLEP+++C+S   K+DGF+SKSG+GSGR + DRQFFFVNGRPVDMPKVGK
Sbjct: 225  ITVFGMNTFNCLEPLNICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGK 284

Query: 1040 LVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENTIFDSLKEALQNIYS 861
            LVNELYKGANSRQ+PIAI++FT+P+RA DVNVTPDKRKIFFS+E +I  SL+E L+ IYS
Sbjct: 285  LVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYS 344

Query: 860  PGHVSFSVNRCENLSKRDDFIKRDECSQM---SPEKFSMKCSDSKEEADDKAQCENGGIH 690
            P   S+SVNR E  ++  D  + +        S ++     SD +EEA  + Q     I 
Sbjct: 345  PSLTSYSVNRFEEPTEETDNSELNPPQTQILSSSKQLFPDGSDLQEEAHSEEQITEDQIP 404

Query: 689  YTTTKEGKNRASVAEGID---------------IDGTSKAGSFSRIRNRQPMNHVGSTTT 555
                K         + +D               + G  KA SF +  + +    + S T 
Sbjct: 405  SKMVKSSTENMHAVKEMDHSYDKDSIEKDFSLRVHGIKKADSFPKWDSEKTTMTINSDTI 464

Query: 554  AQHARLHSGSPKKPIVDNIDSPGRASTV---------------QSSLSNFVTVNKRKHES 420
                   S    K  V N  S   +S +               QSSLS FVTVNKRKHE+
Sbjct: 465  DHQVLSLSEMVVKGAVGNKGSSSHSSYIQSFGNKGSSSHSSYFQSSLSKFVTVNKRKHEN 524

Query: 419  ISTVLTETPLLRGGSVFCQSEKISPRISTFF---FKSHE--NEGADVVKNTDLGSSKKCQ 255
            ISTVL+E PLLR  +  CQ +K +  +       F +H+  N+ A ++++     SK   
Sbjct: 525  ISTVLSEAPLLRNQTPNCQLKKNNSEMHALVSRSFVNHQKTNDSAGIIESE---PSKFLG 581

Query: 254  PDKACNETDDVS-SGGTVNSRVYGQELMIQEEQLSSADSVLPVTTTNNITYE 102
             D A + T++   SGG +N    G++L   E  L  AD    V TT +++ E
Sbjct: 582  VDSAFDATENPHYSGGNINDEKAGEDLENHETPLPPAD----VATTASLSEE 629


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  266 bits (681), Expect = 6e-69
 Identities = 171/412 (41%), Positives = 231/412 (56%), Gaps = 39/412 (9%)
 Frame = -1

Query: 1220 ITVFGMDTFSCLEPISLCISGGCKLDGFLSKSGHGSGRYMSDRQFFFVNGRPVDMPKVGK 1041
            ITVFGM+TF+CLEP+++C+S   K+DGF+SKSG+GSGR + DRQFFFVNGRPVDMPKVGK
Sbjct: 2924 ITVFGMNTFNCLEPLNICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGK 2983

Query: 1040 LVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENTIFDSLKEALQNIYS 861
            LVNELYKGANSRQ+PIAI++FT+P+RA DVNVTPDKRKIFFS+E +I  SL+E L+ IYS
Sbjct: 2984 LVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYS 3043

Query: 860  PGHVSFSVNRCENLSKRDDFIKRDECSQM---SPEKFSMKCSDSKEEADDKAQCENGGIH 690
            P   S+SVNR E  ++  +  + +        S ++     SD +EEA  + Q     I 
Sbjct: 3044 PSLTSYSVNRFEEPTEETBNSELNPPQTQILXSSKQLFPDGSDLQEEAHSEEQITEDQIP 3103

Query: 689  YTTTKEGKNRASVAEGID---------------IDGTSKAGSFSRIRNRQPMNHVGSTTT 555
                K         + +D               + G  KA SF +  + +    + S T 
Sbjct: 3104 SKMVKSSTENMHAVKEMDHSYDKDSIEKDFSLRVHGIKKADSFPKWDSEKTTMTINSDTI 3163

Query: 554  AQHARLHSGSPKKPIVDNIDSPGRASTV---------------QSSLSNFVTVNKRKHES 420
                   S    K  V N  S   +S +               QSSLS FVTVNKRKHE+
Sbjct: 3164 DHQVLSLSEMVVKGAVGNKGSSSHSSYIQSFGNKGSSSHSSYFQSSLSKFVTVNKRKHEN 3223

Query: 419  ISTVLTETPLLRGGSVFCQSEKISPRISTFF---FKSHE--NEGADVVKNTDLGSSKKCQ 255
            ISTVL+E PLLR  +  CQ +K +  +       F +H+  N+ A ++++     SK   
Sbjct: 3224 ISTVLSEAPLLRNQTPNCQLKKNNSEMHALVSRSFVNHQKTNDSAGIIESE---PSKFLG 3280

Query: 254  PDKACNETDDVS-SGGTVNSRVYGQELMIQEEQLSSADSVLPVTTTNNITYE 102
             D A + T++   SGG +N    G++L   E  L  AD    V TT +++ E
Sbjct: 3281 VDSAFDATENPHYSGGNINDEKAGEDLENHETPLPPAD----VATTASLSEE 3328


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  247 bits (630), Expect = 5e-63
 Identities = 159/386 (41%), Positives = 225/386 (58%), Gaps = 20/386 (5%)
 Frame = -1

Query: 1220 ITVFGMDTFSCLEPISLCISGGCKLDGFLSKSGHGSGRYMSDRQFFFVNGRPVDMPKVGK 1041
            ITVFG++TFSCLEP+ + ISG CK++GFLSKSG GSGR + DRQ++FVNGRPVDMPKV K
Sbjct: 221  ITVFGVNTFSCLEPVDIDISGSCKVEGFLSKSGQGSGRNLGDRQYYFVNGRPVDMPKVSK 280

Query: 1040 LVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENTIFDSLKEALQNIYS 861
            LVNELYKGANSRQ+PIAI++FT+P+ ACDVNVTPDKRKIFFS+E++I  +L+E L+  YS
Sbjct: 281  LVNELYKGANSRQYPIAIMNFTIPTTACDVNVTPDKRKIFFSDESSILLALREGLEKNYS 340

Query: 860  PGHVSFSVNRCENLSKRDD---FIKRDECSQMSPEKFSMKCSDSKE---EADDKAQCENG 699
              +  +SVN+ EN +K  D        E S M  ++ S   +DS+E   +A+D +     
Sbjct: 341  SSNSCYSVNKFENHAKAADSSQLCSPREKSNMLSKQSSANGNDSEETQTDAEDSSPLMTV 400

Query: 698  GIHYTTTKEGKNRASVAE--------GIDIDGTSKAGSFSRIRNRQPMNHVGSTTTAQHA 543
             +     + G+      E         + + G  K  S +   + +   H+ +  T Q+A
Sbjct: 401  EVKSKPFQVGERSIHDIEEKFMMKDFALRLHGIKKTDSLTNSNSCKATTHL-NIVTDQNA 459

Query: 542  RLHSGSPKKPIVDNI--DSPGRASTVQSSLSNFVTVNKRKHESISTVLTETPLLRGGSVF 369
            +  S      +V+ +  DS G + + QS LSNF+TVNKRK E I+T L+E P+LR  +  
Sbjct: 460  QCPS-----RVVERVKGDSNGPSGSFQSKLSNFLTVNKRKREDITTQLSEVPVLRNQTSE 514

Query: 368  CQSEK----ISPRISTFFFKSHENEGADVVKNTDLGSSKKCQPDKACNETDDVSSGGTVN 201
            CQ +K    I   +++  F  H  +  D  + TD    K    D   N+T + S    + 
Sbjct: 515  CQLKKSDIDIHDAVTSLLFNHHHID--DSTEFTDAEPPKHHSTDVIINKTRNNSG---LQ 569

Query: 200  SRVYGQELMIQEEQLSSADSVLPVTT 123
             ++   E    E+  SS D V  +TT
Sbjct: 570  PKL--AEDPSGEQNSSSPDDVPSITT 593


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score =  246 bits (627), Expect = 1e-62
 Identities = 143/294 (48%), Positives = 186/294 (63%), Gaps = 15/294 (5%)
 Frame = -1

Query: 1220 ITVFGMDTFSCLEPISLCISGGCKLDGFLSKSGHGSGRYMSDRQFFFVNGRPVDMPKVGK 1041
            ITVFGM TFSCLEP+S+CIS  CK+DGFLSK G GSGR + DRQ++FVNGRPVDMPKV K
Sbjct: 222  ITVFGMSTFSCLEPVSICISDCCKVDGFLSKPGQGSGRNLGDRQYYFVNGRPVDMPKVTK 281

Query: 1040 LVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENTIFDSLKEALQNIYS 861
            LVNELY+GANSRQ+PIAI++F +P+RACDVNVTPDKRKIFFS+E +I  +L+E LQNIYS
Sbjct: 282  LVNELYRGANSRQYPIAIMNFIVPTRACDVNVTPDKRKIFFSDETSILHALREGLQNIYS 341

Query: 860  PGHVSFSVNRCENLSK---RDDFIKRDECSQMSPEKFSMKCSDSKEEADDKAQCENGGIH 690
            P + S+SVN+ E   K           E S +  ++ S   +D+ EE   +    +G   
Sbjct: 342  PSNASYSVNKFEERIKAASNSQSCSPHEKSLVLSKQLSAVSNDA-EEILVEEHTSDGSNL 400

Query: 689  YTTTKEGKNRASVAEGID-----------IDGTSKAGSFSRIRNRQPMNHVGSTTTAQHA 543
              T K   + ++V E  D           +    K  SF    NRQ +  +  T T Q+ 
Sbjct: 401  LQTVKMKSHPSNVGENRDEKRISKDFTLRVHDIPKVYSFPNSNNRQ-LTTLHDTLTDQNT 459

Query: 542  RLHSGSPKKPIVDNIDSPGRASTVQSSLSNFVTVNKRKHESIS-TVLTETPLLR 384
               S    K I ++  S   + +VQS++S FVTV+KRKH+ IS T L+E P+LR
Sbjct: 460  PSPSRVVAKNIAESRGSNSSSRSVQSTISKFVTVSKRKHDDISTTTLSEIPILR 513


>ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 1036

 Score =  234 bits (597), Expect = 3e-59
 Identities = 153/426 (35%), Positives = 230/426 (53%), Gaps = 43/426 (10%)
 Frame = -1

Query: 1220 ITVFGMDTFSCLEPISLCISGGCKLDGFLSKSGHGSGRYMSDRQFFFVNGRPVDMPKVGK 1041
            ITV GM+TFSCLEP++L IS  CK++GFLSKSG G+GR + DRQ+FFVNGRPVDMPKV K
Sbjct: 221  ITVLGMNTFSCLEPVTLSISDSCKVEGFLSKSGQGNGRNLGDRQYFFVNGRPVDMPKVSK 280

Query: 1040 LVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENTIFDSLKEALQNIYS 861
            LVNELYKGANS+Q+PIAIL+FT+P+R  DVNVTPDKRKIFFSEEN I  +L+E LQ IYS
Sbjct: 281  LVNELYKGANSKQYPIAILNFTVPTRVYDVNVTPDKRKIFFSEENAILQALREGLQQIYS 340

Query: 860  PGHVSFSVNRCENLSKRDDFI-----------------------KRDECSQMSPEKFSMK 750
              +V +SVN     +++++ +                       ++++CS+ +    S+ 
Sbjct: 341  ASNVCYSVNEVMLPAEKEECVELCSSHGKSPIVRKLYSPNASCPQKEQCSESNNGSVSLD 400

Query: 749  CSDSKEEADDKAQCENGGIHYTTTKEGKNRAS------VAEGI--DIDG-------TSKA 615
              D++   D  +Q E+   H T +K      +      + EG+  + DG       T +A
Sbjct: 401  EIDTECNNDTISQDEHEEKHITDSKNASESINEYRYTHIDEGLICENDGSLMNQEFTLRA 460

Query: 614  GSFSRIRNRQPMNHVGSTTTAQHARLHSGSPKKPIVDNIDSPGRASTVQSSLSNFVTVNK 435
             S S+  +    +   S+     A L S + +     +  S   +  VQS+L+NFV+VNK
Sbjct: 461  HSASKDDDSGSRSACPSSIIPDQATLVSRTVESGSTSSKYSFNHSRHVQSTLNNFVSVNK 520

Query: 434  RKHESISTVLTETPLLRGGSVFCQSEKISPRISTFFFKSH--ENEGADVVKNTDLGSSKK 261
            R  +S+   L+E P+LR  +  CQ +  +        +S    ++  +  + +++ S K+
Sbjct: 521  RNRDSVIRALSEVPVLRNQAPHCQLKTANTETQDLITRSSLCFDQSDEPARASEIESLKQ 580

Query: 260  CQPDKACNETDDVSS---GGTVNSRVYGQELMIQEEQLSSADSVLPVTTTNNITYESRDT 90
              PD    + ++  S     +V       EL ++           P+  T +IT  S D 
Sbjct: 581  LNPDNVFYKNENAVSFKGDSSVREPKSNMELDLKNN--------TPLGDTASITPSSIDM 632

Query: 89   LATPML 72
            + T +L
Sbjct: 633  ITTDVL 638