BLASTX nr result

ID: Cnidium21_contig00019159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019159
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527396.1| nucleic acid binding protein, putative [Rici...    84   4e-14
ref|XP_003627109.1| Zinc finger protein [Medicago truncatula] gi...    82   1e-13
ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER is...    79   1e-12
emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]    79   1e-12

>ref|XP_002527396.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533206|gb|EEF34962.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 552

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 104/317 (32%), Positives = 134/317 (42%), Gaps = 46/317 (14%)
 Frame = +3

Query: 81   PQLFNNLTHHFNAFSMKKEQQN----------IPQWLA----PLGLGP-HSQTPMIFNHH 215
            PQL N+   + +AFS+KKEQQ           +P WLA     LG G  H   P     H
Sbjct: 255  PQLMNS-HQNLHAFSLKKEQQTFSTTTALRPELPPWLACPPGVLGSGSGHGPGPP----H 309

Query: 216  QQQFTTDHLDLS---LPYHQDL--TQPITSLDXXXXXXXXXAVGPGPTCPPANYIMKTAT 380
             QQ   +H  LS   L + QDL  + P  SL              GPT P          
Sbjct: 310  HQQTPIEHHHLSSSILNFQQDLGSSNPNPSL--------------GPTLPHYQ------A 349

Query: 381  ADITSPHMSATALLQKAALMGATIXXXXXXXXXXXXXMTLMRPHQTQPQ-EASRVLLSSF 557
            A   SPHMSATALLQKAA MGAT+               +MRPHQ Q Q E + V   S 
Sbjct: 350  APPPSPHMSATALLQKAAQMGATMSSKTTTAG------LMMRPHQHQHQHEQAHVTADST 403

Query: 558  NNKD-----AYSCLTGEQEXXXXXXXXXXXXXXXXFNQNHMVFDHG----SSRLNTFEDF 710
            NN         +  + +QE                   N ++        SS  + FE  
Sbjct: 404  NNNANTTGFVLNLSSRDQELAASGGGGSFVHSLQAAGANGVLLQEMMNSLSSAASGFEGT 463

Query: 711  AFSTA---------GLLNSKEDADHHLHGG-----GTGNDAG--MTRDFLGLRPLSNSDI 842
            A +TA         G+LN+ +   + L G        GN+ G  +TRDFLGLR  S+SDI
Sbjct: 464  ATATATSFEDAFVSGVLNNSKKDGNFLDGSLSKATTNGNNGGEDLTRDFLGLRAFSHSDI 523

Query: 843  LDIANLHPNFMNPKNER 893
            L++A    N +N  +E+
Sbjct: 524  LNMAAGLGNCVNTSHEQ 540


>ref|XP_003627109.1| Zinc finger protein [Medicago truncatula] gi|355521131|gb|AET01585.1|
            Zinc finger protein [Medicago truncatula]
          Length = 517

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 88/296 (29%), Positives = 116/296 (39%), Gaps = 28/296 (9%)
 Frame = +3

Query: 90   FNNLTHHFNAFSM-KKEQQN-------IPQWLAPLGLGPHSQTPMIFNHHQQQFTTDHLD 245
            FNN     + F + KKEQ N       IP WL P  +   S +  IF+ H          
Sbjct: 257  FNNPQQDLHNFPLLKKEQHNQSFNLSEIPPWLGPHNVDNLSSSSSIFSQHH--------- 307

Query: 246  LSLPYHQDLTQPITSLDXXXXXXXXXAVGPGPTCPPANYIMKTATADITSPHMSATALLQ 425
                +HQ+   P                  GPT P        +   + S HMSATALLQ
Sbjct: 308  ----HHQENPNP------------SLVHVSGPTLP--------SYQTVPSAHMSATALLQ 343

Query: 426  KAALMGATIXXXXXXXXXXXXXMTLMRPHQTQPQEASRVLLSSFNNKDAYSCLTGEQEXX 605
            KAA MGAT+              T    HQ          L++ +     + L+  QE  
Sbjct: 344  KAAQMGATMNRSGSASSPAMNIKT----HQVDS-------LNNVSGNFGLNLLSSSQEQQ 392

Query: 606  XXXXXXXXXXXXXXFNQN-HMVFDHGSSRLNTFEDFAFST--AGLLNSKEDADHHLH--- 767
                          +  N H V    SS  + FE   F     G++NSK+D + H     
Sbjct: 393  QHQQNTQETNTTSTYLNNIHDVMFSSSSSPSGFEATHFDEMFGGIMNSKKDQNLHHETSL 452

Query: 768  --------------GGGTGNDAGMTRDFLGLRPLSNSDILDIANLHPNFMNPKNER 893
                          GGG G + G+TRDFLGLRPLS+SDIL IA +  N MN + ++
Sbjct: 453  SKKPTSTAEDGGGGGGGGGGNEGLTRDFLGLRPLSHSDILSIAGI-GNCMNDQQQQ 507


>ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER isoform 2 [Vitis vinifera]
          Length = 509

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 96/309 (31%), Positives = 123/309 (39%), Gaps = 47/309 (15%)
 Frame = +3

Query: 75   LQPQLFNNLTHHFNAFSMKKEQQN-------IPQWLAPLGLGPHSQTPMIFNHHQQQFTT 233
            LQ Q   N  H F+AF MKKEQQ+       +P WL+       S + +        FT 
Sbjct: 217  LQQQQQFNSNHDFHAFQMKKEQQSFSIRSEVVPPWLS-------SSSSLFPTRLDHDFTQ 269

Query: 234  DHLDLSLPYHQDLTQPITSLDXXXXXXXXXAVGPGPTCPPANYIMKTATADITSPHMSAT 413
               DL+L   Q+   P  SL              GPT PP +  +        SPHMSAT
Sbjct: 270  TTQDLALHDIQN-PNPNPSL--------------GPTLPPYHPTL--------SPHMSAT 306

Query: 414  ALLQKAALMGATIXXXXXXXXXXXXXMTLMRPHQTQPQE--------------ASRVL-- 545
            ALLQKAA MGAT+             M  +RPHQ                   +SR    
Sbjct: 307  ALLQKAAQMGATMSKTTGGSGASPPAM--IRPHQAHVSADHSCNNTTGFGLNLSSREEMG 364

Query: 546  ------LSSFNNKDAYSCLTGEQEXXXXXXXXXXXXXXXXFNQNHMVFDHGSSRLNTFED 707
                  L+ F NK A +  +                      Q+ M      S    F+ 
Sbjct: 365  GGFVQGLAPFGNK-AAAVPSAAAAAAAATGPGGGAPSPSLLLQDMMT---SLSSATGFDS 420

Query: 708  FAFSTA--GLLNSKEDADH----------------HLHGGGTGNDAGMTRDFLGLRPLSN 833
             +F  A  G+LNS+++ ++                H   GG GND G+TRDFLGLR LS+
Sbjct: 421  SSFEDAFGGMLNSRKNGNNLHQTLPSKSTTTTATTHHSSGGAGND-GLTRDFLGLRALSH 479

Query: 834  SDILDIANL 860
            SDIL IA L
Sbjct: 480  SDILSIAGL 488


>emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]
          Length = 532

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 96/309 (31%), Positives = 123/309 (39%), Gaps = 47/309 (15%)
 Frame = +3

Query: 75   LQPQLFNNLTHHFNAFSMKKEQQN-------IPQWLAPLGLGPHSQTPMIFNHHQQQFTT 233
            LQ Q   N  H F+AF MKKEQQ+       +P WL+       S + +        FT 
Sbjct: 240  LQQQQQFNSNHDFHAFQMKKEQQSFSIRSEVVPPWLS-------SSSSLFPTRLDHDFTQ 292

Query: 234  DHLDLSLPYHQDLTQPITSLDXXXXXXXXXAVGPGPTCPPANYIMKTATADITSPHMSAT 413
               DL+L   Q+   P  SL              GPT PP +  +        SPHMSAT
Sbjct: 293  TTQDLALHDIQN-PNPNPSL--------------GPTLPPYHPTL--------SPHMSAT 329

Query: 414  ALLQKAALMGATIXXXXXXXXXXXXXMTLMRPHQTQPQE--------------ASRVL-- 545
            ALLQKAA MGAT+             M  +RPHQ                   +SR    
Sbjct: 330  ALLQKAAQMGATMSKTTGGSGASPPAM--IRPHQAHVSADHSCNNTTGFGLNLSSREEMG 387

Query: 546  ------LSSFNNKDAYSCLTGEQEXXXXXXXXXXXXXXXXFNQNHMVFDHGSSRLNTFED 707
                  L+ F NK A +  +                      Q+ M      S    F+ 
Sbjct: 388  GGFVQGLAPFGNK-AAAVPSAAAAAAAATGPGGGAPSPSLLLQDMMT---SLSSATGFDS 443

Query: 708  FAFSTA--GLLNSKEDADH----------------HLHGGGTGNDAGMTRDFLGLRPLSN 833
             +F  A  G+LNS+++ ++                H   GG GND G+TRDFLGLR LS+
Sbjct: 444  SSFEDAFGGMLNSRKNGNNLHQTLPSKSTTTTATTHHSSGGAGND-GLTRDFLGLRALSH 502

Query: 834  SDILDIANL 860
            SDIL IA L
Sbjct: 503  SDILSIAGL 511


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