BLASTX nr result
ID: Cnidium21_contig00019130
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00019130 (546 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 106 2e-21 ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 101 7e-20 ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-18 emb|CBI40324.3| unnamed protein product [Vitis vinifera] 96 4e-18 ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicag... 94 1e-17 >ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis sativus] gi|449480172|ref|XP_004155819.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis sativus] Length = 492 Score = 106 bits (265), Expect = 2e-21 Identities = 61/121 (50%), Positives = 68/121 (56%), Gaps = 7/121 (5%) Frame = +3 Query: 204 MNSRGRYPPGMGGNRGG--NVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 377 MN+RGRYPPG+G RGG N PS Sbjct: 1 MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQYQQQHQHQQLQQQQQW 60 Query: 378 XT-----GGGVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEF 542 GG DS+V+EVEKTVQSEAVDSSS DWKA+LK+PP DTRY+TEDVTATKGNEF Sbjct: 61 LKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNEF 120 Query: 543 E 545 E Sbjct: 121 E 121 >ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera] gi|147785187|emb|CAN75439.1| hypothetical protein VITISV_000835 [Vitis vinifera] Length = 491 Score = 101 bits (252), Expect = 7e-20 Identities = 59/120 (49%), Positives = 67/120 (55%), Gaps = 6/120 (5%) Frame = +3 Query: 204 MNSRGRYPPGM-GGNRGG-----NVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365 M++RGRYPPG+ GG RGG N + Sbjct: 1 MHARGRYPPGIHGGGRGGGMGTGNPSGPNPNFQYRNPNQQQYVQRNVGQSYQQFQQQNQQ 60 Query: 366 XXXXXTGGGVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEFE 545 G DS+V+EVEKTVQSEAVDSSS DWKA+LK+PP DTRYRTEDVTATKGNEFE Sbjct: 61 QWLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFE 120 >ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|222843075|gb|EEE80622.1| predicted protein [Populus trichocarpa] Length = 499 Score = 97.1 bits (240), Expect = 2e-18 Identities = 57/125 (45%), Positives = 65/125 (52%), Gaps = 12/125 (9%) Frame = +3 Query: 207 NSRGRYPPGMGGNRGG--NVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 380 N+RGRYPPG+G RGG N P+ Sbjct: 4 NNRGRYPPGIGAGRGGGMNANPNFQSRVPQQQYVQRNFGQNHHQQQYYQHQQHHNQQQQQ 63 Query: 381 TGG----------GVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATK 530 DSS++EVEKTVQSEAVDSSS DWKA+LK+PP DTRYRTEDVTATK Sbjct: 64 QQQQQWLRRNQLTAADSSIDEVEKTVQSEAVDSSSQDWKAKLKIPPADTRYRTEDVTATK 123 Query: 531 GNEFE 545 GN+FE Sbjct: 124 GNDFE 128 >emb|CBI40324.3| unnamed protein product [Vitis vinifera] Length = 472 Score = 95.9 bits (237), Expect = 4e-18 Identities = 45/52 (86%), Positives = 49/52 (94%) Frame = +3 Query: 390 GVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEFE 545 G DS+V+EVEKTVQSEAVDSSS DWKA+LK+PP DTRYRTEDVTATKGNEFE Sbjct: 50 GADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFE 101 >ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|355498915|gb|AES80118.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] Length = 514 Score = 94.0 bits (232), Expect = 1e-17 Identities = 47/55 (85%), Positives = 50/55 (90%), Gaps = 1/55 (1%) Frame = +3 Query: 384 GGGVDSSV-EEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEFE 545 GGG D++V EEVEKTVQSEA DSSS DWKA+LKLPP DTRYRTEDVTATKGNEFE Sbjct: 89 GGGTDTNVVEEVEKTVQSEANDSSSQDWKARLKLPPADTRYRTEDVTATKGNEFE 143