BLASTX nr result

ID: Cnidium21_contig00019130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019130
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   106   2e-21
ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   101   7e-20
ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
emb|CBI40324.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicag...    94   1e-17

>ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
           sativus] gi|449480172|ref|XP_004155819.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
           sativus]
          Length = 492

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/121 (50%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
 Frame = +3

Query: 204 MNSRGRYPPGMGGNRGG--NVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 377
           MN+RGRYPPG+G  RGG  N  PS                                    
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQYQQQHQHQQLQQQQQW 60

Query: 378 XT-----GGGVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEF 542
                  GG  DS+V+EVEKTVQSEAVDSSS DWKA+LK+PP DTRY+TEDVTATKGNEF
Sbjct: 61  LKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNEF 120

Query: 543 E 545
           E
Sbjct: 121 E 121


>ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
           gi|147785187|emb|CAN75439.1| hypothetical protein
           VITISV_000835 [Vitis vinifera]
          Length = 491

 Score =  101 bits (252), Expect = 7e-20
 Identities = 59/120 (49%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
 Frame = +3

Query: 204 MNSRGRYPPGM-GGNRGG-----NVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365
           M++RGRYPPG+ GG RGG     N +                                  
Sbjct: 1   MHARGRYPPGIHGGGRGGGMGTGNPSGPNPNFQYRNPNQQQYVQRNVGQSYQQFQQQNQQ 60

Query: 366 XXXXXTGGGVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEFE 545
                   G DS+V+EVEKTVQSEAVDSSS DWKA+LK+PP DTRYRTEDVTATKGNEFE
Sbjct: 61  QWLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFE 120


>ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|222843075|gb|EEE80622.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 57/125 (45%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
 Frame = +3

Query: 207 NSRGRYPPGMGGNRGG--NVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 380
           N+RGRYPPG+G  RGG  N  P+                                     
Sbjct: 4   NNRGRYPPGIGAGRGGGMNANPNFQSRVPQQQYVQRNFGQNHHQQQYYQHQQHHNQQQQQ 63

Query: 381 TGG----------GVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATK 530
                          DSS++EVEKTVQSEAVDSSS DWKA+LK+PP DTRYRTEDVTATK
Sbjct: 64  QQQQQWLRRNQLTAADSSIDEVEKTVQSEAVDSSSQDWKAKLKIPPADTRYRTEDVTATK 123

Query: 531 GNEFE 545
           GN+FE
Sbjct: 124 GNDFE 128


>emb|CBI40324.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = +3

Query: 390 GVDSSVEEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEFE 545
           G DS+V+EVEKTVQSEAVDSSS DWKA+LK+PP DTRYRTEDVTATKGNEFE
Sbjct: 50  GADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFE 101


>ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355498915|gb|AES80118.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 514

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/55 (85%), Positives = 50/55 (90%), Gaps = 1/55 (1%)
 Frame = +3

Query: 384 GGGVDSSV-EEVEKTVQSEAVDSSSNDWKAQLKLPPQDTRYRTEDVTATKGNEFE 545
           GGG D++V EEVEKTVQSEA DSSS DWKA+LKLPP DTRYRTEDVTATKGNEFE
Sbjct: 89  GGGTDTNVVEEVEKTVQSEANDSSSQDWKARLKLPPADTRYRTEDVTATKGNEFE 143


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