BLASTX nr result

ID: Cnidium21_contig00019028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019028
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439156.1| hypothetical protein SORBIDRAFT_09g001480 [S...    98   6e-19
ref|NP_189621.1| General transcription factor 2-related zinc fin...    96   4e-18
ref|NP_174954.1| General transcription factor 2-related zinc fin...    94   1e-17
ref|NP_189620.1| General transcription factor 2-related zinc fin...    93   2e-17
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    92   4e-17

>ref|XP_002439156.1| hypothetical protein SORBIDRAFT_09g001480 [Sorghum bicolor]
           gi|241944441|gb|EES17586.1| hypothetical protein
           SORBIDRAFT_09g001480 [Sorghum bicolor]
          Length = 524

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/91 (52%), Positives = 63/91 (69%)
 Frame = +2

Query: 2   GASNMTGKFNYFRSCISKENSSAYYVHYFGHELQLVVVPVAKCSPFGSDFFYHLSRIMNL 181
           GASNM G+FN  R+ I +EN SAYYVH F H+LQLV+V VAK +   SDFF  +S ++N+
Sbjct: 89  GASNMRGEFNGLRALIMRENRSAYYVHCFAHQLQLVIVAVAKKNDDISDFFDMISLLLNV 148

Query: 182 VGTSCKSKDIFRHGQHENILKCFESGEISSG 274
            G SCK +D+ R  Q E + K   SG+IS+G
Sbjct: 149 AGASCKREDMIRQSQQERVKKAIGSGQISTG 179


>ref|NP_189621.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644086|gb|AEE77607.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 536

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/91 (53%), Positives = 61/91 (67%)
 Frame = +2

Query: 2   GASNMTGKFNYFRSCISKENSSAYYVHYFGHELQLVVVPVAKCSPFGSDFFYHLSRIMNL 181
           GASNM GKFN  RS I KENSSAYYVH F H+LQLVV+ VAK      +FFY +S ++N+
Sbjct: 103 GASNMKGKFNGLRSLILKENSSAYYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNV 162

Query: 182 VGTSCKSKDIFRHGQHENILKCFESGEISSG 274
           VG SCK KD  R    + + +   +GEI +G
Sbjct: 163 VGASCKRKDKIREIDRQKVEEKISNGEIKTG 193


>ref|NP_174954.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332193792|gb|AEE31913.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 496

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/92 (52%), Positives = 61/92 (66%)
 Frame = +2

Query: 2   GASNMTGKFNYFRSCISKENSSAYYVHYFGHELQLVVVPVAKCSPFGSDFFYHLSRIMNL 181
           GA+NM G+FN+ RS I +ENSSAYY+H F H+LQLVVV VAK      DFF  +S ++N+
Sbjct: 161 GANNMKGEFNWLRSLILRENSSAYYIHCFAHQLQLVVVAVAKKQFEVGDFFDMISALLNV 220

Query: 182 VGTSCKSKDIFRHGQHENILKCFESGEISSGK 277
           VG SCK KD  R    + I +    GEI +GK
Sbjct: 221 VGASCKGKDRIREEYLKEIEEGINQGEIKTGK 252


>ref|NP_189620.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644085|gb|AEE77606.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 505

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/91 (52%), Positives = 60/91 (65%)
 Frame = +2

Query: 2   GASNMTGKFNYFRSCISKENSSAYYVHYFGHELQLVVVPVAKCSPFGSDFFYHLSRIMNL 181
           GASNM GKFN  RS I KENSSAYYVH F H+LQLVV+ VAK      +FFY +S ++N+
Sbjct: 204 GASNMKGKFNGLRSLILKENSSAYYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNV 263

Query: 182 VGTSCKSKDIFRHGQHENILKCFESGEISSG 274
           VG  CK KD  R    + + +   +GEI +G
Sbjct: 264 VGAFCKRKDKIREIDRQKVEEKISNGEIKTG 294


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/91 (51%), Positives = 61/91 (67%)
 Frame = +2

Query: 2   GASNMTGKFNYFRSCISKENSSAYYVHYFGHELQLVVVPVAKCSPFGSDFFYHLSRIMNL 181
           GASNM G+FN  RS I KE+SSAYYVH F H+LQLVV+ VAK      +FFY +S ++N+
Sbjct: 378 GASNMKGEFNGLRSLILKESSSAYYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNV 437

Query: 182 VGTSCKSKDIFRHGQHENILKCFESGEISSG 274
           VG SCK KD  R    + + +   +GEI +G
Sbjct: 438 VGASCKRKDKIREIHRQKVEEKISNGEIKTG 468


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