BLASTX nr result

ID: Cnidium21_contig00018988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018988
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]              110   2e-22
gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]                 109   2e-22
gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]                 108   5e-22
ref|XP_003521814.1| PREDICTED: uncharacterized protein LOC100785...   103   1e-20
gb|AFK43416.1| unknown [Medicago truncatula]                          103   2e-20

>gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]
          Length = 65

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/65 (86%), Positives = 59/65 (90%)
 Frame = +1

Query: 1   MTVMKTLRIFVAQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPQPALSDVVAGMT 180
           M VM+ L+IFV QEPVVAASCLIAGFGLFLPAVVRPILDS ESSKQVPQPAL DVVAG+T
Sbjct: 1   MAVMQKLKIFVVQEPVVAASCLIAGFGLFLPAVVRPILDSLESSKQVPQPALRDVVAGVT 60

Query: 181 GKK*G 195
           GKK G
Sbjct: 61  GKKQG 65


>gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]
          Length = 65

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/63 (88%), Positives = 57/63 (90%)
 Frame = +1

Query: 1   MTVMKTLRIFVAQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPQPALSDVVAGMT 180
           M VM  LR+FV QEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVP P LSDVVAGMT
Sbjct: 1   MAVMGKLRMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPAPPLSDVVAGMT 60

Query: 181 GKK 189
           GKK
Sbjct: 61  GKK 63


>gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]
          Length = 64

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/63 (85%), Positives = 58/63 (92%)
 Frame = +1

Query: 1   MTVMKTLRIFVAQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPQPALSDVVAGMT 180
           M VM+ L+IFV QEPVV ASCLIAGFGLFLPAVVRPILDSFE+SKQVP PAL+DVVAGMT
Sbjct: 1   MPVMEKLKIFVVQEPVVTASCLIAGFGLFLPAVVRPILDSFETSKQVPPPALNDVVAGMT 60

Query: 181 GKK 189
           GKK
Sbjct: 61  GKK 63


>ref|XP_003521814.1| PREDICTED: uncharacterized protein LOC100785256 [Glycine max]
           gi|356573241|ref|XP_003554771.1| PREDICTED:
           uncharacterized protein LOC100795854 isoform 1 [Glycine
           max] gi|356573243|ref|XP_003554772.1| PREDICTED:
           uncharacterized protein LOC100795854 isoform 2 [Glycine
           max]
          Length = 63

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +1

Query: 1   MTVMKTLRIFVAQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPQPALSDVVAGMT 180
           M VM+ L++FV QEPVVAASCLIAGFGLFLPA VRP+LDS++++KQ PQPALSDVVAGMT
Sbjct: 1   MAVMERLKMFVVQEPVVAASCLIAGFGLFLPAFVRPMLDSYQATKQPPQPALSDVVAGMT 60

Query: 181 GKK 189
           GKK
Sbjct: 61  GKK 63


>gb|AFK43416.1| unknown [Medicago truncatula]
          Length = 63

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +1

Query: 1   MTVMKTLRIFVAQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPQPALSDVVAGMT 180
           M VM+ LR+FVAQEPVVAASCLIAGFGLFLPA VRP+LD++ +++Q PQPALSDVVAGMT
Sbjct: 1   MAVMERLRMFVAQEPVVAASCLIAGFGLFLPAFVRPMLDTYRAAEQPPQPALSDVVAGMT 60

Query: 181 GKK 189
           GKK
Sbjct: 61  GKK 63


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