BLASTX nr result

ID: Cnidium21_contig00018987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018987
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    67   3e-09
dbj|BAJ24868.1| S-locus linked F-box protein type-4 [Petunia axi...    66   8e-09
ref|XP_004159645.1| PREDICTED: F-box protein CPR30-like [Cucumis...    65   1e-08
ref|XP_004147498.1| PREDICTED: F-box protein CPR30-like [Cucumis...    65   1e-08

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 7/221 (3%)
 Frame = -2

Query: 723 LYLWNPNVKRHRLLVSTCFKKRLADRDESYYLVAMGFDKHTDDYKVIRIVYVKDGKGKLF 544
           + LWNP++      +S     +      S  ++  GFD  T+DYKVIRIVY       L 
Sbjct: 122 IVLWNPSIG-----LSVTLPLQRISYKVSNVVLGFGFDSRTNDYKVIRIVYYSTNDDSLM 176

Query: 543 GDVAPKVEIYSFKKHTWRKMKNPRVPRL-VNEHG--VYFDGCYYWLELKQPETEEARTCY 373
             V P+VEI+   + TWR   +  VP   V+++   +  +G  +W+    P         
Sbjct: 177 --VPPEVEIFELSRGTWRINNSASVPAYDVSKYSSQIVLEGAIHWVGYYSP--------- 225

Query: 372 GNKLKIMSFDFHTELFGEFKVPRDVPRDLGKNSPYKLMQFEDSLALCVVDTVLPDRAGIR 193
             +L I  +  H E F EF++P ++       S   L      L   ++  +   + G R
Sbjct: 226 -RELTIAVYVVHDEEFKEFRMPDEI-------SGTALQHLSVMLCCQLLSIIQYKKRGSR 277

Query: 192 FPH---CIWLMRQENGVVTWTLRFRALLK-ECGYPLGITKN 82
             +   CIW+M +     +WT  F  ++    G  LG+  N
Sbjct: 278 LCYESCCIWVMNEYGVHDSWTKLFNVVVTGGIGKVLGLRNN 318


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
 Frame = -2

Query: 726 ELYLWNPNVKRHRLL--VSTCFKKRLADRDESYYLVAMGFDKHTDDYKVIRIVYVKDGKG 553
           ++ +WNP+ ++HR++  +    K+    +  S Y+   G+D   DDYK++RI     G  
Sbjct: 114 DIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGK 173

Query: 552 KLFGDVAPKVEIYSFKKHTWRKMKN-PRVPRLVNEHGVYFDGCYYWLELKQPETEEARTC 376
           + F     +V++YS +K +WR++ + P        +GV+ +G  +W+  + PE+  A   
Sbjct: 174 RSF---ESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANI- 229

Query: 375 YGNKLKIMSFDFHTELFGEFKVPRDVPRDLGKNSPYKLMQFEDSL-----ALCVVDTVLP 211
                 +++ D   E + E   P            YK   F   L      LC +   L 
Sbjct: 230 ------VVALDLGVEDYREVLQPE-----------YKDKNFYIDLGVLRGCLCFLANFLG 272

Query: 210 DRAGIRFPHCIWLMRQENGVVTWTLRFR-ALLKECGY-----PLGITKNGTLVI 67
           +R        +W+M++     +WT  F  A  +  G+     PL  +K+G  V+
Sbjct: 273 ERVD------VWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVL 320


>dbj|BAJ24868.1| S-locus linked F-box protein type-4 [Petunia axillaris subsp.
           axillaris]
          Length = 403

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
 Frame = -2

Query: 717 LWNPNVKRHRLLVSTCFKKRLADRDESYYLV----AMGFDKHTDDYKVIRI--VYVKDGK 556
           L+NP+ +++RLL S+ F        + YY        GFD   +DYKV RI  VY +D  
Sbjct: 140 LFNPSTRKYRLLPSSPF-----GIPKGYYRSIDSGGFGFDYVVNDYKVFRISDVYTEDRY 194

Query: 555 GKLFGDVAPKVEIYSFKKHTWRKMKN--PRVPRLV-NEHGVYFDGCYYWLELKQPETEEA 385
           G    +   KVE+Y      WR++ +    +PRL      +Y++G Y+W+     E    
Sbjct: 195 GYP-EEGERKVEVYEVGIDIWRELDHVDQDLPRLFWLTSSMYYNGAYHWITTLNHE---- 249

Query: 384 RTCYGNKLKIMSFDFHTELFGEFKVPRDVPRDLGKNSPYKLMQFEDSLALCVVDTVLPDR 205
                +KL I+ FD  TE+F     P    R     + + LM  ++ L+      + P+ 
Sbjct: 250 -----DKLIILCFDMSTEIFRNINTPD--TRQFSSGTCHSLMLLDECLSFMCHPYLGPEI 302

Query: 204 AGIRFPHCIWLMRQENGVVTWTLRFR-ALLKECGYPLGITKNGTLVIE 64
                   IW+M+  N   +WT ++   +L     PL + K+  L  +
Sbjct: 303 DPTTDSIDIWMMKDYNVYESWTKKYTIRVLSIDESPLAVWKDSLLFFQ 350


>ref|XP_004159645.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 383

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
 Frame = -2

Query: 726 ELYLWNPNVKR-HRL----LVSTCFKKRLADRDESYYLVAMGFDKHTDDYKVIRIVYVKD 562
           +++L NP+ +  H+L    L+ T       D D S   V  G+D  + D+KV+R+V   +
Sbjct: 121 DIFLCNPSTREFHKLPPSILLLTEPPVEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFVE 180

Query: 561 GKGKLFGDVAPKVEIYSFKKHTWRKMKNPRVPRL--VNEHGVYFDGCYYWLELKQPETEE 388
           G G  +    P+VE+Y   K  WR++++P    +       ++ +G YYW  +    TE 
Sbjct: 181 GPGYFY---PPRVEVYDLSKDRWREIESPVCGHVFWAPCFEMFHEGTYYWWAM-TGNTE- 235

Query: 387 ARTCYGNKLKIMSFDFHTELFGEFKVPRDVPRDLGKNSPYKLMQFEDSLALCVVDTVLPD 208
                GN   I +FD   E+FG   VP       G    Y+ +   D    C+V    P 
Sbjct: 236 -----GNTEIIQTFDMSEEVFGRIPVPESFE---GTGDRYRSLGVLDG---CIVLFHYPS 284

Query: 207 RAGIRFPHCIWLMRQENGVVTWT 139
           R   R      + + E G V+W+
Sbjct: 285 RGDERSFDMWEMAKDEWGGVSWS 307


>ref|XP_004147498.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 376

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
 Frame = -2

Query: 726 ELYLWNPNVKR-HRL----LVSTCFKKRLADRDESYYLVAMGFDKHTDDYKVIRIVYVKD 562
           +++L NP+ +  H+L    L+ T       D D S   V  G+D  + D+KV+R+V   +
Sbjct: 121 DIFLCNPSTREFHKLPPSILLLTEPPVEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFVE 180

Query: 561 GKGKLFGDVAPKVEIYSFKKHTWRKMKNPRVPRL--VNEHGVYFDGCYYWLELKQPETEE 388
           G G  +    P+VE+Y   K  WR++++P    +       ++ +G YYW  +    TE 
Sbjct: 181 GPGYFY---PPRVEVYDLSKDRWREIESPVCGHVFWAPCFEMFHEGTYYWWAM-TGNTE- 235

Query: 387 ARTCYGNKLKIMSFDFHTELFGEFKVPRDVPRDLGKNSPYKLMQFEDSLALCVVDTVLPD 208
                GN   I +FD   E+FG   VP       G    Y+ +   D    C+V    P 
Sbjct: 236 -----GNTEIIQTFDMSEEVFGRIPVPESFE---GTGDRYRSLGVLDG---CIVLFHYPS 284

Query: 207 RAGIRFPHCIWLMRQENGVVTWT 139
           R   R      + + E G V+W+
Sbjct: 285 RGDERSFDMWEMAKDEWGGVSWS 307


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