BLASTX nr result

ID: Cnidium21_contig00018975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018975
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533037.1| conserved hypothetical protein [Ricinus comm...    51   1e-07
ref|XP_002531695.1| hypothetical protein RCOM_0483300 [Ricinus c...    50   4e-07
emb|CAN79989.1| hypothetical protein VITISV_021023 [Vitis vinifera]    58   3e-06

>ref|XP_002533037.1| conserved hypothetical protein [Ricinus communis]
           gi|223527175|gb|EEF29345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 51.2 bits (121), Expect(2) = 1e-07
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = -3

Query: 552 MGRQSNDPTKVSSSIALLQERFRQL*RMKEERAASDVLQIY 430
           MGRQ+ DPT + SSIALLQERFRQL R KE R   ++L+++
Sbjct: 1   MGRQNCDPTSIHSSIALLQERFRQLERAKEMRQQRELLRLF 41



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = -1

Query: 359 PY*DSLSLGLEIYSKSADSRSTDVSPSTKLWSTGAAATITRSYTFEKSEVNTSLQL 192
           P  DSL L   + ++ A+ +  +   S  LWS      IT +  F++S+V+TSL L
Sbjct: 71  PLQDSLYLQPNMQNRHAELQINETPNSVDLWSKNTVMHITNN--FDESDVDTSLHL 124


>ref|XP_002531695.1| hypothetical protein RCOM_0483300 [Ricinus communis]
           gi|223528671|gb|EEF30686.1| hypothetical protein
           RCOM_0483300 [Ricinus communis]
          Length = 144

 Score = 49.7 bits (117), Expect(2) = 4e-07
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -3

Query: 552 MGRQSNDPTKVSSSIALLQERFRQL*RMKEERAASDVLQIYRLSS 418
           MGRQ+ D T  SSSIALLQERFR+L R++E+R   ++L+++   S
Sbjct: 1   MGRQNGDATVASSSIALLQERFRELQRIREKRREKELLKLFSSES 45



 Score = 30.8 bits (68), Expect(2) = 4e-07
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = -1

Query: 404 PARMCFQNSTVF-SRPPY*DSLSLGLEIYSKS---ADSRSTDVSPSTKLWSTGAAATITR 237
           P ++ FQ   +  +R P      L L + S+S   AD R+ D    T LW   +  + + 
Sbjct: 72  PNKLTFQPEMILPNRAPALQDSFLSLRLNSQSNNHADIRALDTP--TSLWPNTSTGSSSP 129

Query: 236 SYTFEKSEVNTSLQL 192
              FE S+V+TSL L
Sbjct: 130 RTNFEHSDVDTSLHL 144


>emb|CAN79989.1| hypothetical protein VITISV_021023 [Vitis vinifera]
          Length = 131

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = -3

Query: 552 MGRQSNDPTKVSSSIALLQERFRQL*RMKEERAASDVLQIY----RLSSHFLLACQDVLS 385
           MGRQ +DPT VSSSIALLQERFRQL R+KE R   ++L+++    R++   LL    +LS
Sbjct: 1   MGRQGSDPTMVSSSIALLQERFRQLQRVKERREEKELLKLFSESERIAPAMLLDSGKLLS 60

Query: 384 KQ 379
            Q
Sbjct: 61  GQ 62


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