BLASTX nr result

ID: Cnidium21_contig00018973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018973
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    89   1e-15
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR...    84   5e-14
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    84   5e-14
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    81   3e-13
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    81   3e-13

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 70/199 (35%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
 Frame = -1

Query: 623 TLTHLKLVNFWFPYAPTFGTFPYLTNLELVQVELIDLADSKQNIFN-CPVLEKLTLILCD 447
           +LTHL+L N W     TF  F  L +L+L  V L    D  +N+ + CP+LE+LTL+  D
Sbjct: 147 SLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQ--DVFENLISSCPLLERLTLMNFD 204

Query: 446 GIFPTNFCAPKLKCLHQLCYKITSEFSLAGLEN---LSEYSFGL-----LEKSRTRAKKF 291
           G    N  AP L     L + I  +F     EN   L+  S GL     + +SR      
Sbjct: 205 GFTNLNIDAPNL-----LFFDIGGKFEDISFENTFQLAVVSIGLYLNFEINQSRLHGGSS 259

Query: 290 NFDKVLGSLPKIEKFCIAMQFMQYLAAGCSSKTLSKSLPYLKILNISDVLFNKSSEVSCL 111
           N  K    LP +++  +   F++YLA G     L +    L  L+I  + FN   E+S  
Sbjct: 260 NLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLSYLSIR-INFNDLKEISAS 318

Query: 110 LCLIRSAPNLCKLNISADP 54
           LCL+RS+PNL +L I A P
Sbjct: 319 LCLLRSSPNLQELEILARP 337


>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
           At1g13570-like [Cucumis sativus]
          Length = 418

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
 Frame = -1

Query: 620 LTHLKLVNFWFPYAPTFGTFPYLTNLELVQVELIDLADSKQNIFNCPVLEKLTLILCDGI 441
           LT L+L        PTF  F  L +L+L QV LI   D +  I NCP+LE L L   D +
Sbjct: 136 LTLLELYRCELDPPPTFKGFLCLKSLKLHQV-LIAPEDIESLISNCPLLESLALSYFDSL 194

Query: 440 FPTNFCAPKLKCLH------QLCYKITS---EFSLAGLENLSEYSFGLLEKSRTRAKKFN 288
              N CAP LK L+       +C + T      S+A   N     FG L          N
Sbjct: 195 V-LNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDESEPFGDLSDC-------N 246

Query: 287 FDKVLGSLPKIEKFCIAMQFMQYLAAGCSSKTLSKSLPYLKILNISDVLFNKSSEVSCLL 108
           ++K LG +P +EK    + F +YL+ G S++ +  S  YLK + +  V F   +E+  +L
Sbjct: 247 YEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFEDMNEILVVL 306

Query: 107 CLIRSAPNLCKLNI--SADPIA 48
            LI S+PNL +L I  S++P+A
Sbjct: 307 RLITSSPNLEELQISGSSNPVA 328


>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
           sativus]
          Length = 418

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
 Frame = -1

Query: 620 LTHLKLVNFWFPYAPTFGTFPYLTNLELVQVELIDLADSKQNIFNCPVLEKLTLILCDGI 441
           LT L+L        PTF  F  L +L+L QV LI   D +  I NCP+LE L L   D +
Sbjct: 136 LTLLELYRCELDPPPTFKGFLCLKSLKLHQV-LIAPEDIESLISNCPLLESLALSYFDSL 194

Query: 440 FPTNFCAPKLKCLH------QLCYKITS---EFSLAGLENLSEYSFGLLEKSRTRAKKFN 288
              N CAP LK L+       +C + T      S+A   N     FG L          N
Sbjct: 195 V-LNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDESEPFGDLSDC-------N 246

Query: 287 FDKVLGSLPKIEKFCIAMQFMQYLAAGCSSKTLSKSLPYLKILNISDVLFNKSSEVSCLL 108
           ++K LG +P +EK    + F +YL+ G S++ +  S  YLK + +  V F   +E+  +L
Sbjct: 247 YEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFEDMNEILVVL 306

Query: 107 CLIRSAPNLCKLNI--SADPIA 48
            LI S+PNL +L I  S++P+A
Sbjct: 307 RLITSSPNLEELQISGSSNPVA 328


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
 Frame = -1

Query: 620 LTHLKLVNFWFPYAPTFGTFPYLTNLELVQVELIDLADSKQNIFN-CPVLEKLTLILCDG 444
           L HL+L N W     TF  F  L +L+L  V L    D+ +N+ + CP+LE+LTL+  DG
Sbjct: 148 LHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQ--DAFENLISTCPLLERLTLMNFDG 205

Query: 443 IFPTNFCAPKLKCLHQLCYKITSEFSLAGLENLSEY---SFGLL-----EKSRTRAKKFN 288
               N  AP L+      + I  +F     +N S+    S GL       + R   +  N
Sbjct: 206 FNYLNIHAPNLQF-----FDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHGRTSN 260

Query: 287 FDKVLGSLPKIEKFCIAMQFMQYLAAGCSSKTLSKSLPYLKILNISDVLFNKSSEVSCLL 108
             + L  LP+I++  I   F++YLA G     L      L  L+I  + F  S E+S  L
Sbjct: 261 LVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR-INFYDSKEISAAL 319

Query: 107 CLIRSAPNLCKLNISADP 54
           CL RS+PNL +L I A P
Sbjct: 320 CLFRSSPNLRELEILARP 337


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
 Frame = -1

Query: 620 LTHLKLVNFWFPYAPTFGTFPYLTNLELVQVELIDLADSKQNIFN-CPVLEKLTLILCDG 444
           L HL+L N W     TF  F  L +L+L  V L    D+ +N+ + CP+LE+LTL+  DG
Sbjct: 380 LHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQ--DAFENLISTCPLLERLTLMNFDG 437

Query: 443 IFPTNFCAPKLKCLHQLCYKITSEFSLAGLENLSEY---SFGLL-----EKSRTRAKKFN 288
               N  AP L+      + I  +F     +N S+    S GL       + R   +  N
Sbjct: 438 FNYLNIHAPNLQF-----FDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHGRTSN 492

Query: 287 FDKVLGSLPKIEKFCIAMQFMQYLAAGCSSKTLSKSLPYLKILNISDVLFNKSSEVSCLL 108
             + L  LP+I++  I   F++YLA G     L      L  L+I  + F  S E+S  L
Sbjct: 493 LVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR-INFYDSKEISAAL 551

Query: 107 CLIRSAPNLCKLNISADP 54
           CL RS+PNL +L I A P
Sbjct: 552 CLFRSSPNLRELEILARP 569


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