BLASTX nr result

ID: Cnidium21_contig00018972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018972
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    72   9e-11
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    71   2e-10
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    69   1e-09
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    69   1e-09
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    68   1e-09

>ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477725|gb|AES58928.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 657

 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 40/77 (51%), Positives = 49/77 (63%)
 Frame = -3

Query: 235 TSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEVS 56
           +SN++  F  +H I KL I  YF KYLA G  P +L  P I L  L +S INF DL E+S
Sbjct: 566 SSNLLNFFAHIHHIYKLDIRGYFFKYLAAGVVPVKLPTPCINLTYLWLS-INFYDLKEIS 624

Query: 55  CLLCLIRSAPNLHELNI 5
             LC+ RS+PNL ELNI
Sbjct: 625 TALCVFRSSPNLKELNI 641


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = -3

Query: 235 TSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEVS 56
           +SN++K F  +  +++L +  YFLKYLA G  P +L +P I L  L++  INF DL E+S
Sbjct: 258 SSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLSYLSIR-INFNDLKEIS 316

Query: 55  CLLCLIRSAPNLHELNI 5
             LCL+RS+PNL EL I
Sbjct: 317 ASLCLLRSSPNLQELEI 333


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 38/78 (48%), Positives = 50/78 (64%)
 Frame = -3

Query: 238 KTSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEV 59
           +TSN+V+    + +I++L I  YFLKYLA G  P +L  P I L  L++  INF D  E+
Sbjct: 257 RTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR-INFYDSKEI 315

Query: 58  SCLLCLIRSAPNLHELNI 5
           S  LCL RS+PNL EL I
Sbjct: 316 SAALCLFRSSPNLRELEI 333


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 38/78 (48%), Positives = 50/78 (64%)
 Frame = -3

Query: 238 KTSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEV 59
           +TSN+V+    + +I++L I  YFLKYLA G  P +L  P I L  L++  INF D  E+
Sbjct: 489 RTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR-INFYDSKEI 547

Query: 58  SCLLCLIRSAPNLHELNI 5
           S  LCL RS+PNL EL I
Sbjct: 548 SAALCLFRSSPNLRELEI 565


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/77 (44%), Positives = 50/77 (64%)
 Frame = -3

Query: 235 TSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEVS 56
           +S +++ F  +  I++L +  YFLKYL+ G  P+RL KP   L  L++  INF DL E S
Sbjct: 257 SSKLLRFFANLPHIRRLEVQSYFLKYLSIGNVPSRLPKPCFDLNYLSIR-INFNDLEENS 315

Query: 55  CLLCLIRSAPNLHELNI 5
             LCL+RS+PN+ EL +
Sbjct: 316 AALCLLRSSPNVQELEM 332


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