BLASTX nr result
ID: Cnidium21_contig00018972
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00018972 (651 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 72 9e-11 ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 71 2e-10 ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 69 1e-09 ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 69 1e-09 ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ... 68 1e-09 >ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355477725|gb|AES58928.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 657 Score = 72.0 bits (175), Expect = 9e-11 Identities = 40/77 (51%), Positives = 49/77 (63%) Frame = -3 Query: 235 TSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEVS 56 +SN++ F +H I KL I YF KYLA G P +L P I L L +S INF DL E+S Sbjct: 566 SSNLLNFFAHIHHIYKLDIRGYFFKYLAAGVVPVKLPTPCINLTYLWLS-INFYDLKEIS 624 Query: 55 CLLCLIRSAPNLHELNI 5 LC+ RS+PNL ELNI Sbjct: 625 TALCVFRSSPNLKELNI 641 >ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max] Length = 427 Score = 71.2 bits (173), Expect = 2e-10 Identities = 37/77 (48%), Positives = 52/77 (67%) Frame = -3 Query: 235 TSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEVS 56 +SN++K F + +++L + YFLKYLA G P +L +P I L L++ INF DL E+S Sbjct: 258 SSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLSYLSIR-INFNDLKEIS 316 Query: 55 CLLCLIRSAPNLHELNI 5 LCL+RS+PNL EL I Sbjct: 317 ASLCLLRSSPNLQELEI 333 >ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 428 Score = 68.6 bits (166), Expect = 1e-09 Identities = 38/78 (48%), Positives = 50/78 (64%) Frame = -3 Query: 238 KTSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEV 59 +TSN+V+ + +I++L I YFLKYLA G P +L P I L L++ INF D E+ Sbjct: 257 RTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR-INFYDSKEI 315 Query: 58 SCLLCLIRSAPNLHELNI 5 S LCL RS+PNL EL I Sbjct: 316 SAALCLFRSSPNLRELEI 333 >ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 660 Score = 68.6 bits (166), Expect = 1e-09 Identities = 38/78 (48%), Positives = 50/78 (64%) Frame = -3 Query: 238 KTSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEV 59 +TSN+V+ + +I++L I YFLKYLA G P +L P I L L++ INF D E+ Sbjct: 489 RTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR-INFYDSKEI 547 Query: 58 SCLLCLIRSAPNLHELNI 5 S LCL RS+PNL EL I Sbjct: 548 SAALCLFRSSPNLRELEI 565 >ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 426 Score = 68.2 bits (165), Expect = 1e-09 Identities = 34/77 (44%), Positives = 50/77 (64%) Frame = -3 Query: 235 TSNVVKVFGGVHKIKKLSIAKYFLKYLAGGGPPNRLSKPLIYLKTLNVSGINFKDLSEVS 56 +S +++ F + I++L + YFLKYL+ G P+RL KP L L++ INF DL E S Sbjct: 257 SSKLLRFFANLPHIRRLEVQSYFLKYLSIGNVPSRLPKPCFDLNYLSIR-INFNDLEENS 315 Query: 55 CLLCLIRSAPNLHELNI 5 LCL+RS+PN+ EL + Sbjct: 316 AALCLLRSSPNVQELEM 332