BLASTX nr result
ID: Cnidium21_contig00018951
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00018951
(894 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata su... 128 2e-27
ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [S... 126 6e-27
tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays] 125 1e-26
gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba... 125 2e-26
dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum] 124 2e-26
>ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
gi|297334235|gb|EFH64653.1| hexaubiquitin protein
[Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 128 bits (321), Expect = 2e-27
Identities = 69/94 (73%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 368 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 427
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGGTINLS 71
KQL+D R LA+YNIQK T+ LVLRL GG++N S
Sbjct: 428 KQLEDGRTLADYNIQKESTLHLVLRLRGGSVNSS 461
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 123
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 140 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 199
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 200 KQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 216 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 275
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 276 KQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 292 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 351
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 352 KQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 114 bits (285), Expect = 3e-23
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -3
Query: 313 MQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAGKQLKDDRCLAEYN 134
MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAGKQL+D R LA+YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 133 IQKGCTVQLVLRLCGG 86
IQK T+ LVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
gi|241932536|gb|EES05681.1| hypothetical protein
SORBIDRAFT_04g031060 [Sorghum bicolor]
Length = 459
Score = 126 bits (317), Expect = 6e-27
Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 368 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 427
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGGTIN 77
KQL+D R LA+YNIQK T+ LVLRL GG +N
Sbjct: 428 KQLEDGRTLADYNIQKESTLHLVLRLRGGRVN 459
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 123
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 140 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 199
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 200 KQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 216 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 275
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 276 KQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 123 bits (309), Expect = 5e-26
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 292 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 351
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 352 KQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 114 bits (285), Expect = 3e-23
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -3
Query: 313 MQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAGKQLKDDRCLAEYN 134
MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAGKQL+D R LA+YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 133 IQKGCTVQLVLRLCGG 86
IQK T+ LVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
Length = 205
Score = 125 bits (315), Expect = 1e-26
Identities = 76/125 (60%), Positives = 91/125 (72%), Gaps = 10/125 (8%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 123
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGGTINLS--------NLFGLVNRR-GIQLNPRS 20
KQL+D R LA+YNIQK T+ LVLRL GG I S N ++ R+ +L+PR+
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRA 183
Query: 19 K*CKK 5
C+K
Sbjct: 184 VNCRK 188
Score = 114 bits (285), Expect = 3e-23
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -3
Query: 313 MQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAGKQLKDDRCLAEYN 134
MQIFV+TL GKTITL +ESSDTI N+KA+IQ KEGIPPD+QRLIFAGKQL+D R LA+YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 133 IQKGCTVQLVLRLCGG 86
IQK T+ LVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 224
Score = 125 bits (313), Expect = 2e-26
Identities = 70/115 (60%), Positives = 84/115 (73%), Gaps = 1/115 (0%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTI N+K +IQ KEGIPPD+QRLIFAG
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAG 123
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGGTINLSNLFGLVNRRGIQLNPRSK*CK 8
KQL+D R LA+YNIQK T+ LVLRL GG FG ++R + + + C+
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLRLRGGGKKTKCCFGECSKRVVLITGDCRFCQ 178
Score = 112 bits (280), Expect = 1e-22
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -3
Query: 313 MQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAGKQLKDDRCLAEYN 134
MQIFV+TL GKTITL +ESSDTI N+K +IQ KEGIPPD+QRLIFAGKQL+D R LA+YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 133 IQKGCTVQLVLRLCGG 86
IQK T+ LVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum]
Length = 228
Score = 124 bits (312), Expect = 2e-26
Identities = 68/89 (76%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTISN+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAG 123
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 124 KQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 124 bits (312), Expect = 2e-26
Identities = 68/89 (76%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
Frame = -3
Query: 349 ESTLE-VLWLRGRMQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAG 173
ESTL VL LRG MQIFV+TL GKTITL +ESSDTISN+KA+IQ KEGIPPD+QRLIFAG
Sbjct: 140 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAG 199
Query: 172 KQLKDDRCLAEYNIQKGCTVQLVLRLCGG 86
KQL+D R LA+YNIQK T+ LVLRL GG
Sbjct: 200 KQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 114 bits (284), Expect = 4e-23
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = -3
Query: 313 MQIFVRTLAGKTITLMLESSDTISNLKAQIQKKEGIPPDRQRLIFAGKQLKDDRCLAEYN 134
MQIFV+TL GKTITL +ESSDTISN++A+IQ KEGIPPD+QRLIFAGKQL+D R LA+YN
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 133 IQKGCTVQLVLRLCGG 86
IQK T+ LVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76