BLASTX nr result

ID: Cnidium21_contig00018941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018941
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associat...   234   1e-59
ref|XP_002519434.1| conserved hypothetical protein [Ricinus comm...   209   4e-52
ref|NP_190880.1| vacuolar protein-sorting-associated protein 37-...   202   5e-50
ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arab...   199   3e-49
ref|XP_004137854.1| PREDICTED: vacuolar protein-sorting-associat...   197   1e-48

>ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 2
           [Vitis vinifera] gi|297740010|emb|CBI30192.3| unnamed
           protein product [Vitis vinifera]
          Length = 233

 Score =  234 bits (596), Expect = 1e-59
 Identities = 122/178 (68%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
 Frame = -3

Query: 532 MFKSFWGSQEQEAQPRPQEIPTDSWYPPSVLSS-QXXXXXXXXXXXXXXXXXXXPGDRPQ 356
           MFKSFWGSQEQ+ QPRPQ+I   SWYPPSV++S                     P DRPQ
Sbjct: 1   MFKSFWGSQEQQPQPRPQDISGQSWYPPSVVTSPSSSRPSTPSSSTSSSFSLQRPSDRPQ 60

Query: 355 SHSPVSPAEAAGIIVYLKDKSVDELRRLLADKDAYNQLLLSLDMVRTQNHVRDELKNETL 176
           S S VSPAEAAG+IV LKDKS+DELR+LL+DKDAYNQLLLSLD V+ QN++RDEL+ ETL
Sbjct: 61  SPSHVSPAEAAGMIVLLKDKSIDELRKLLSDKDAYNQLLLSLDQVKIQNNLRDELRKETL 120

Query: 175 QLARNNLEKESYLMELQNQCRIIRTTELATAQEKLNELERQKAEIMKFYSPASLLHHI 2
           QLAR NLEKE  ++EL+NQCRIIRTTELA AQEKLNELERQK EI+KFYSPA LLH +
Sbjct: 121 QLARENLEKEPQIVELRNQCRIIRTTELAAAQEKLNELERQKEEILKFYSPACLLHRL 178


>ref|XP_002519434.1| conserved hypothetical protein [Ricinus communis]
           gi|223541297|gb|EEF42848.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  209 bits (532), Expect = 4e-52
 Identities = 113/178 (63%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
 Frame = -3

Query: 532 MFKSFWGSQEQEAQPRPQEIPT-DSWYPPSVLSSQXXXXXXXXXXXXXXXXXXXPGDRPQ 356
           MFK FWGSQEQ+ QPRPQ++P   SWYP SV+SS                       RPQ
Sbjct: 1   MFK-FWGSQEQQGQPRPQDVPAPQSWYPSSVVSSPNSSRPTTPSSSSSSSYGL---QRPQ 56

Query: 355 SHSPVSPAEAAGIIVYLKDKSVDELRRLLADKDAYNQLLLSLDMVRTQNHVRDELKNETL 176
           S S VSPAEAAG+I  LKDKSVDELR+LL+DKDAY+Q LLSLD V+ QN++RDEL+ ETL
Sbjct: 57  SPSHVSPAEAAGVIALLKDKSVDELRKLLSDKDAYHQFLLSLDQVKIQNNIRDELRKETL 116

Query: 175 QLARNNLEKESYLMELQNQCRIIRTTELATAQEKLNELERQKAEIMKFYSPASLLHHI 2
           QLAR+NLEKE  + EL+NQCRIIRTTELATAQEKLNELE+QK E+++  SPASLL  +
Sbjct: 117 QLARDNLEKEPQINELRNQCRIIRTTELATAQEKLNELEKQKEEMLRSCSPASLLQRL 174


>ref|NP_190880.1| vacuolar protein-sorting-associated protein 37-1 [Arabidopsis
           thaliana] gi|75202732|sp|Q9SCP9.1|VP371_ARATH RecName:
           Full=Vacuolar protein-sorting-associated protein 37
           homolog 1; Short=AtVPS37-1; AltName: Full=ESCRT-I
           complex subunit VPS37 homolog 1
           gi|6630732|emb|CAB64215.1| putative protein [Arabidopsis
           thaliana] gi|332645518|gb|AEE79039.1| vacuolar
           protein-sorting-associated protein 37-1 [Arabidopsis
           thaliana]
          Length = 217

 Score =  202 bits (514), Expect = 5e-50
 Identities = 111/180 (61%), Positives = 132/180 (73%), Gaps = 6/180 (3%)
 Frame = -3

Query: 523 SFWGSQEQE-AQPRPQEIPTDS-WYPPSVLSSQXXXXXXXXXXXXXXXXXXXPGDRPQSH 350
           +FWGS++Q+  Q RPQE  + S WY PS++SS                       RPQS 
Sbjct: 3   NFWGSKDQQQGQSRPQEASSQSPWYSPSLVSSPS-------------------SSRPQSS 43

Query: 349 ----SPVSPAEAAGIIVYLKDKSVDELRRLLADKDAYNQLLLSLDMVRTQNHVRDELKNE 182
               + VSP EAAGIIV+LKDKSVDELR+LL+DKDAY Q LLSLD V+ QN+++DEL+ E
Sbjct: 44  GQISAQVSPGEAAGIIVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRE 103

Query: 181 TLQLARNNLEKESYLMELQNQCRIIRTTELATAQEKLNELERQKAEIMKFYSPASLLHHI 2
           TLQLAR+NLEKE  +MEL+NQCRIIRTTELATAQEKLNELERQK EI+KFYSP SLLH +
Sbjct: 104 TLQLARDNLEKEPQIMELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKL 163


>ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arabidopsis lyrata subsp.
           lyrata] gi|297323740|gb|EFH54161.1| hypothetical protein
           ARALYDRAFT_906697 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  199 bits (507), Expect = 3e-49
 Identities = 109/180 (60%), Positives = 129/180 (71%), Gaps = 6/180 (3%)
 Frame = -3

Query: 523 SFWGSQEQE-AQPRPQEIPTDS-WYPPSVLSSQXXXXXXXXXXXXXXXXXXXPGDRPQSH 350
           +FWGS++Q+  Q RPQE  + S WYPPS++SS                       RPQ+ 
Sbjct: 3   NFWGSKDQQQGQSRPQEASSQSPWYPPSLVSSPS-------------------SSRPQTS 43

Query: 349 SP----VSPAEAAGIIVYLKDKSVDELRRLLADKDAYNQLLLSLDMVRTQNHVRDELKNE 182
                 VSP EAAGII +LKDKSVDELR+LL+DKDAY Q LLSLD V+ QN+++DEL+ E
Sbjct: 44  GQIGANVSPGEAAGIIAFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKIQNNIKDELRRE 103

Query: 181 TLQLARNNLEKESYLMELQNQCRIIRTTELATAQEKLNELERQKAEIMKFYSPASLLHHI 2
           TLQLAR NLEKE  +MEL+NQCRIIRTTELA AQEKLNELERQK EI+KFYSP SLLH +
Sbjct: 104 TLQLARENLEKEPQIMELRNQCRIIRTTELAAAQEKLNELERQKEEILKFYSPGSLLHKL 163


>ref|XP_004137854.1| PREDICTED: vacuolar protein-sorting-associated protein 37 homolog
           2-like [Cucumis sativus]
           gi|449501015|ref|XP_004161255.1| PREDICTED: vacuolar
           protein-sorting-associated protein 37 homolog 2-like
           [Cucumis sativus]
          Length = 224

 Score =  197 bits (502), Expect = 1e-48
 Identities = 108/177 (61%), Positives = 128/177 (72%)
 Frame = -3

Query: 532 MFKSFWGSQEQEAQPRPQEIPTDSWYPPSVLSSQXXXXXXXXXXXXXXXXXXXPGDRPQS 353
           MFK FWGSQE++ +P P ++ T SWYPPSV SS+                     DRPQS
Sbjct: 1   MFK-FWGSQEEQVRP-PPDVSTQSWYPPSVSSSRPGTPGSTSSNHSSSQRL---SDRPQS 55

Query: 352 HSPVSPAEAAGIIVYLKDKSVDELRRLLADKDAYNQLLLSLDMVRTQNHVRDELKNETLQ 173
            S VSPAEAAGII  LKDKSVDELR+LL+DKD YNQ  LSLD V+ QN++RDEL+ ETLQ
Sbjct: 56  PSHVSPAEAAGIISALKDKSVDELRKLLSDKDTYNQFFLSLDQVKIQNNLRDELRKETLQ 115

Query: 172 LARNNLEKESYLMELQNQCRIIRTTELATAQEKLNELERQKAEIMKFYSPASLLHHI 2
           LA  NLEKE  +MEL+NQC IIRTTELA A+EKLNEL+++K EI+K  SPASLL  +
Sbjct: 116 LASENLEKEPRIMELRNQCSIIRTTELAAAKEKLNELDQKKEEILKLCSPASLLRRL 172


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