BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018923
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17575.3| unnamed protein product [Vitis vinifera]              214   1e-53
ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi...   214   1e-53
ref|XP_003524343.1| PREDICTED: pentatricopeptide repeat-containi...   193   4e-47
ref|XP_002525094.1| pentatricopeptide repeat-containing protein,...   192   1e-46
ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   186   4e-45

>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  214 bits (546), Expect = 1e-53
 Identities = 109/184 (59%), Positives = 138/184 (75%)
 Frame = -2

Query: 842  IMEVYCTHCRLDGALLAFKYSVKMGVLLKKTVYLSLIGVLIRINSFPEVVEIVDEMLNAK 663
            I+EV C HCR++GALLAF+YSVKMG+ +++  YL+L+GV IR NSFP+V +IV++M+ A 
Sbjct: 468  IIEVNCAHCRINGALLAFEYSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAG 527

Query: 662  HSLGTHLNALLIYRLGCVGKPVLAAKIFDLLPDDQKSTAAYTALISAYFSCGDTGKGLQT 483
             SLG +L ALLIYRLGC  +P  AAK+F LLPDDQK TAAYTALISAYFS G+  KGL+ 
Sbjct: 528  ISLGMYLGALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKI 587

Query: 482  YEIMRTKGIPSALGTYNVLLSGLERCGKVGGLETYRKEKKRLQAATEYQHQLPEEEMICN 303
            Y+ M+ K I  ALGTYN+LL+GLE+ G+    E YRKEKK L      Q  +  +E ICN
Sbjct: 588  YKTMQRKRIHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTHGHSQDIVSMDEKICN 647

Query: 302  LLFA 291
            LLF+
Sbjct: 648  LLFS 651


>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Vitis vinifera]
          Length = 519

 Score =  214 bits (546), Expect = 1e-53
 Identities = 109/184 (59%), Positives = 138/184 (75%)
 Frame = -2

Query: 842 IMEVYCTHCRLDGALLAFKYSVKMGVLLKKTVYLSLIGVLIRINSFPEVVEIVDEMLNAK 663
           I+EV C HCR++GALLAF+YSVKMG+ +++  YL+L+GV IR NSFP+V +IV++M+ A 
Sbjct: 331 IIEVNCAHCRINGALLAFEYSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAG 390

Query: 662 HSLGTHLNALLIYRLGCVGKPVLAAKIFDLLPDDQKSTAAYTALISAYFSCGDTGKGLQT 483
            SLG +L ALLIYRLGC  +P  AAK+F LLPDDQK TAAYTALISAYFS G+  KGL+ 
Sbjct: 391 ISLGMYLGALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKI 450

Query: 482 YEIMRTKGIPSALGTYNVLLSGLERCGKVGGLETYRKEKKRLQAATEYQHQLPEEEMICN 303
           Y+ M+ K I  ALGTYN+LL+GLE+ G+    E YRKEKK L      Q  +  +E ICN
Sbjct: 451 YKTMQRKRIHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTHGHSQDIVSMDEKICN 510

Query: 302 LLFA 291
           LLF+
Sbjct: 511 LLFS 514


>ref|XP_003524343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Glycine max]
          Length = 585

 Score =  193 bits (491), Expect = 4e-47
 Identities = 104/186 (55%), Positives = 133/186 (71%), Gaps = 2/186 (1%)
 Frame = -2

Query: 842 IMEVYCTHCRLDGALLAFKYSVKMGVLLKKTVYLSLIGVLIRINSFPEVVEIVDEMLNAK 663
           I+EV C+HCR +GALLAFKYSV MG+ +++T YLSLIG+LIR N F ++ EIV++M  A 
Sbjct: 395 IIEVNCSHCRPEGALLAFKYSVTMGISIERTGYLSLIGLLIRSNMFSKLAEIVEKMTRAG 454

Query: 662 HSLGTHLNALLIYRLGCVGKPVLAAKIFDLLPDDQKSTAAYTALISAYFSCGDTGKGLQT 483
           HSLG +L +LLI+RLGC  K  LA KIF+LLPD+ K +A YTALIS YFS     + L+ 
Sbjct: 455 HSLGIYLASLLIFRLGCARKHTLAMKIFNLLPDNHKCSATYTALISVYFSVRRVNEALEI 514

Query: 482 YEIMRTKGIPSALGTYNVLLSGLERCGKVGGLETYRKEKKR--LQAATEYQHQLPEEEMI 309
           Y+IM +KG    LGTY+VL++GLER GK    E YRK KKR  L+A +  Q  +  E  I
Sbjct: 515 YKIMCSKGFCPVLGTYDVLIAGLERNGKYAEAEHYRKAKKRKSLRANSGSQESVCIEGKI 574

Query: 308 CNLLFA 291
           CNLLF+
Sbjct: 575 CNLLFS 580


>ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535553|gb|EEF37221.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  192 bits (487), Expect = 1e-46
 Identities = 98/184 (53%), Positives = 131/184 (71%)
 Frame = -2

Query: 842 IMEVYCTHCRLDGALLAFKYSVKMGVLLKKTVYLSLIGVLIRINSFPEVVEIVDEMLNAK 663
           I+EV C+ CR D AL+AF+YS+++G+ L++T YL+LIG++IR N+   V+EIV E +   
Sbjct: 284 IIEVNCSQCRPDSALMAFEYSMRVGIDLERTAYLALIGIMIRSNTSLWVLEIVKETIRVG 343

Query: 662 HSLGTHLNALLIYRLGCVGKPVLAAKIFDLLPDDQKSTAAYTALISAYFSCGDTGKGLQT 483
           HSLG +L+ALLI+RLG   +P  AAKIFDLLPD+QK TA YTA+I  YFS G   K L+ 
Sbjct: 344 HSLGLYLSALLIHRLGSARRPNCAAKIFDLLPDEQKCTATYTAMIGVYFSAGSAAKALKI 403

Query: 482 YEIMRTKGIPSALGTYNVLLSGLERCGKVGGLETYRKEKKRLQAATEYQHQLPEEEMICN 303
           Y+ M+   I  +LGTYNVLL+GLE+ G+V   + +RKEK+ L A       LP EE IC+
Sbjct: 404 YKTMKKNSINPSLGTYNVLLAGLEKSGRVCETDNFRKEKRSLMADGNRLSCLPMEEKICD 463

Query: 302 LLFA 291
           LLFA
Sbjct: 464 LLFA 467


>ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g01390-like [Glycine max]
          Length = 545

 Score =  186 bits (473), Expect = 4e-45
 Identities = 103/186 (55%), Positives = 128/186 (68%), Gaps = 2/186 (1%)
 Frame = -2

Query: 842 IMEVYCTHCRLDGALLAFKYSVKMGVLLKKTVYLSLIGVLIRINSFPEVVEIVDEMLNAK 663
           I+EV C+HCR  GALLAFKYSV MG+ +++T YLSLIG+LIR N F ++VEIV+EM  A 
Sbjct: 355 IIEVNCSHCRPKGALLAFKYSVTMGISIERTGYLSLIGLLIRSNMFSKLVEIVEEMTRAG 414

Query: 662 HSLGTHLNALLIYRLGCVGKPVLAAKIFDLLPDDQKSTAAYTALISAYFSCGDTGKGLQT 483
           +SLGT+L +LL + LGC  K  LA KIF+LLPD+ K TA +TALIS YFS     K L+ 
Sbjct: 415 YSLGTYLASLLXHXLGCAKKHTLAMKIFNLLPDNHKCTATFTALISVYFSVRRVTKALEI 474

Query: 482 YEIMRTKGIPSALGTYNVLLSGLERCGKVGGLETYRKEK--KRLQAATEYQHQLPEEEMI 309
           Y+IM TKG    LGTY+VL++G E  GK    E YRK K  K L A +  Q  +  E  I
Sbjct: 475 YKIMCTKGFCPVLGTYDVLIAGFETNGKYAEAEHYRKAKKSKSLHANSGSQESVCIEGKI 534

Query: 308 CNLLFA 291
           CNLLF+
Sbjct: 535 CNLLFS 540