BLASTX nr result

ID: Cnidium21_contig00018888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018888
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526954.1| protein with unknown function [Ricinus commu...   316   6e-84
ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|2...   314   2e-83
ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane prot...   312   7e-83
ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane prot...   303   4e-80
ref|XP_002301724.1| predicted protein [Populus trichocarpa] gi|2...   297   2e-78

>ref|XP_002526954.1| protein with unknown function [Ricinus communis]
           gi|223533706|gb|EEF35441.1| protein with unknown
           function [Ricinus communis]
          Length = 187

 Score =  316 bits (809), Expect = 6e-84
 Identities = 140/175 (80%), Positives = 159/175 (90%)
 Frame = -3

Query: 909 GMGVKECQNMIRRSLRTPMVKFLKEQMGKTGCNIGDNFIKAVNCEQSVAGGYISGEGIVI 730
           G  ++ECQ+MIR+SLRTPMVKFL+E + K GC IGDNFIKAVNCE+ ++GGY+SG+GIV+
Sbjct: 13  GRTIEECQDMIRKSLRTPMVKFLREHLEKAGCGIGDNFIKAVNCEKKMSGGYVSGDGIVV 72

Query: 729 CSNRLNMQDEVTQVVIHELIHAYDDCRSANLDWTNCAHHACSEIRAGHLSGDCHYKREFL 550
           CSN +NMQDEV QVVIHELIHAYDDCR+ANLDW NC HHACSEIRAGHLSGDCHYKRE L
Sbjct: 73  CSNHMNMQDEVNQVVIHELIHAYDDCRAANLDWANCVHHACSEIRAGHLSGDCHYKRELL 132

Query: 549 RGFMKIRGHEQDCVKRRVMKSLINNPNCPEAAAKDAMEAVWDTCYNDTQPFDRAP 385
           RG+MKIRGHEQ+CV+RRVMKS+I NP C EAAAKDAMEAVWD CYNDT+PFDRAP
Sbjct: 133 RGYMKIRGHEQECVRRRVMKSMIANPYCSEAAAKDAMEAVWDVCYNDTKPFDRAP 187


>ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|222847326|gb|EEE84873.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  314 bits (804), Expect = 2e-83
 Identities = 138/176 (78%), Positives = 158/176 (89%)
 Frame = -3

Query: 912 DGMGVKECQNMIRRSLRTPMVKFLKEQMGKTGCNIGDNFIKAVNCEQSVAGGYISGEGIV 733
           DG  V+EC+NMIRRS RTPMVKFL+E M K GC +G+NF+KAVNC++ +AGGY+ GEGI+
Sbjct: 12  DGTTVEECKNMIRRSFRTPMVKFLREHMEKAGCGVGENFLKAVNCDKKIAGGYVRGEGIM 71

Query: 732 ICSNRLNMQDEVTQVVIHELIHAYDDCRSANLDWTNCAHHACSEIRAGHLSGDCHYKREF 553
           +CSN +N QD+V QVVIHELIHAYDDCR+ANLDW +CAHHACSEIRAGHLSGDCHYKRE 
Sbjct: 72  VCSNHMNTQDDVNQVVIHELIHAYDDCRAANLDWADCAHHACSEIRAGHLSGDCHYKREL 131

Query: 552 LRGFMKIRGHEQDCVKRRVMKSLINNPNCPEAAAKDAMEAVWDTCYNDTQPFDRAP 385
           LRG+MK+RGHEQDCVKRRVMKS+I NP C +AAAKDAMEAVWD CYNDTQPFDRAP
Sbjct: 132 LRGYMKLRGHEQDCVKRRVMKSMIANPYCSKAAAKDAMEAVWDVCYNDTQPFDRAP 187


>ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane protease ATP23-like
           [Cucumis sativus] gi|449483813|ref|XP_004156699.1|
           PREDICTED: mitochondrial inner membrane protease
           ATP23-like [Cucumis sativus]
          Length = 195

 Score =  312 bits (800), Expect = 7e-83
 Identities = 141/189 (74%), Positives = 163/189 (86%), Gaps = 2/189 (1%)
 Frame = -3

Query: 945 PAGGSSSFYNK--DGMGVKECQNMIRRSLRTPMVKFLKEQMGKTGCNIGDNFIKAVNCEQ 772
           P  GS+  Y+    G   +EC++MIRRSLRTPMVKFL E + K+GC IGD FIKAV+CE+
Sbjct: 7   PEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIKAVHCEK 66

Query: 771 SVAGGYISGEGIVICSNRLNMQDEVTQVVIHELIHAYDDCRSANLDWTNCAHHACSEIRA 592
            ++GGY+ GEGI++CSN +N+QDEV QVVIHELIHA+DDCR+ANLDW NC HHACSEIRA
Sbjct: 67  QISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRA 126

Query: 591 GHLSGDCHYKREFLRGFMKIRGHEQDCVKRRVMKSLINNPNCPEAAAKDAMEAVWDTCYN 412
           GHLSGDCHYKRE LRGFMK+RGHEQ+CV+RRVMKSL+ NP CPEAAAKDAMEAVWD CYN
Sbjct: 127 GHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYN 186

Query: 411 DTQPFDRAP 385
           DTQPFDRAP
Sbjct: 187 DTQPFDRAP 195


>ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane protease ATP23 [Vitis
           vinifera] gi|296081332|emb|CBI17714.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  303 bits (776), Expect = 4e-80
 Identities = 141/196 (71%), Positives = 164/196 (83%), Gaps = 1/196 (0%)
 Frame = -3

Query: 969 MDADS-DVKPAGGSSSFYNKDGMGVKECQNMIRRSLRTPMVKFLKEQMGKTGCNIGDNFI 793
           M+ DS    PA   SS  N  GM VKEC+ MI++SLRTPMVKFL+E + K+GC IGD FI
Sbjct: 1   MEGDSAPTIPAADVSSGVN-GGMTVKECEQMIQKSLRTPMVKFLRENLEKSGCAIGDKFI 59

Query: 792 KAVNCEQSVAGGYISGEGIVICSNRLNMQDEVTQVVIHELIHAYDDCRSANLDWTNCAHH 613
           KA+ C   V+GGY  GEGIV+CSN +N+QDEV QVVIHELIHAYDDCR+ANLDWTNCAHH
Sbjct: 60  KAIYCNTKVSGGYARGEGIVVCSNHMNIQDEVNQVVIHELIHAYDDCRAANLDWTNCAHH 119

Query: 612 ACSEIRAGHLSGDCHYKREFLRGFMKIRGHEQDCVKRRVMKSLINNPNCPEAAAKDAMEA 433
           ACSEIR+GHLSGDCH+KRE LRG++K+RGH Q+CV+RRVMKS+  NP+C EAAAKDAMEA
Sbjct: 120 ACSEIRSGHLSGDCHFKRELLRGYLKVRGHGQECVRRRVMKSVTANPHCSEAAAKDAMEA 179

Query: 432 VWDTCYNDTQPFDRAP 385
           VWD CYNDT+PFDRAP
Sbjct: 180 VWDVCYNDTKPFDRAP 195


>ref|XP_002301724.1| predicted protein [Populus trichocarpa] gi|222843450|gb|EEE80997.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  297 bits (761), Expect = 2e-78
 Identities = 126/172 (73%), Positives = 156/172 (90%)
 Frame = -3

Query: 900 VKECQNMIRRSLRTPMVKFLKEQMGKTGCNIGDNFIKAVNCEQSVAGGYISGEGIVICSN 721
           VKEC++MIRRS RTPMV+FL+E + K GC + +NF KAVNC++S+AGGY+ G+GI++CSN
Sbjct: 3   VKECEDMIRRSFRTPMVRFLRENLEKAGCGVSENFFKAVNCDKSIAGGYVRGKGIMVCSN 62

Query: 720 RLNMQDEVTQVVIHELIHAYDDCRSANLDWTNCAHHACSEIRAGHLSGDCHYKREFLRGF 541
            +N+QD+V QV+ HELIHAYDDC++ANLDW +CAHHACSEIRAGHLSGDCHYKRE LRG+
Sbjct: 63  HMNIQDDVNQVIAHELIHAYDDCQAANLDWADCAHHACSEIRAGHLSGDCHYKRELLRGY 122

Query: 540 MKIRGHEQDCVKRRVMKSLINNPNCPEAAAKDAMEAVWDTCYNDTQPFDRAP 385
           +K+RGHEQ+CV+RRVMKS+I NP+C EAAA+DAMEAVWD CYNDT+PFDRAP
Sbjct: 123 IKLRGHEQECVRRRVMKSVIANPHCSEAAARDAMEAVWDVCYNDTRPFDRAP 174


Top