BLASTX nr result

ID: Cnidium21_contig00018887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018887
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28700.3| unnamed protein product [Vitis vinifera]              395   e-108
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]   380   e-103
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...   354   2e-95
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   307   2e-81
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...   296   5e-78

>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  395 bits (1015), Expect = e-108
 Identities = 198/285 (69%), Positives = 229/285 (80%)
 Frame = -1

Query: 857  SLKLGLMPGPTASFGSSQSCIYSTRNSADISGFSWNDKRSRQGKEXXXXXXXXXXXXXSD 678
            SL+LG++PGPT S GSSQ  +Y+ RNS D +GFSWNDKRSRQGKE              D
Sbjct: 178  SLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGD 237

Query: 677  NGAPGELLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLI 498
            +GA G LL+RLHL NIER+DNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +CHLI
Sbjct: 238  SGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLI 297

Query: 497  ERLFFESSKTGRDDSLKLSPTCSDLVQNCPNLNSLALRGFKLQDFKILALIKGFRKLKHL 318
            ERLFFESSKTGRDDSLK SPTC DLV NCP+L SLALRGFKL D+K+  L+KGF KLK++
Sbjct: 298  ERLFFESSKTGRDDSLK-SPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKGFHKLKYV 356

Query: 317  DFSTSYSISGAFLKKLVGGAGGNLLEVIILRDCMHLRKAEVERFISAIIAGEFKFLRHLD 138
            DFSTSYSI+G FL+ L    GGNLLEV++LRDCMHL++ EV +F+SAIIAG+F+ LR LD
Sbjct: 357  DFSTSYSITGTFLRNLGSSTGGNLLEVLLLRDCMHLKEVEVAKFLSAIIAGDFRLLRLLD 416

Query: 137  VSNREGLASEEDWCSRCYDPSFIPAEQLYGERPNFCLLAEFPVEG 3
            +SNREGLASE DW  RCY+ S IP +Q+  ERP+ CLLAEFP EG
Sbjct: 417  ISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDICLLAEFPSEG 461


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score =  380 bits (975), Expect = e-103
 Identities = 198/314 (63%), Positives = 229/314 (72%), Gaps = 29/314 (9%)
 Frame = -1

Query: 857  SLKLGLMPGPTASFGSSQSCIYSTRNSADISGFSWNDKRSRQGKEXXXXXXXXXXXXXSD 678
            SL+LG++PGPT S GSSQ  +Y+ RNS D +GFSWNDKRSRQGKE              D
Sbjct: 178  SLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGD 237

Query: 677  NGAPGELLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLI 498
            +GA G LL+RLHL NIER+DNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +CHLI
Sbjct: 238  SGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLI 297

Query: 497  ERLFFESSKTGRDDSLKLSPTCSDLVQNCPNLNSLALRGFKLQDFKILALIK-------- 342
            ERLFFESSKTGRDDSLK SPTC DLV NCP+L SLALRGFKL D+K+  L+K        
Sbjct: 298  ERLFFESSKTGRDDSLK-SPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKVVVHNFLI 356

Query: 341  ---------------------GFRKLKHLDFSTSYSISGAFLKKLVGGAGGNLLEVIILR 225
                                 GF KLK++DFSTSYSI+G FL+ L    GGNLLEV++LR
Sbjct: 357  GRIVGLRHRGEFLIVSALVCMGFHKLKYVDFSTSYSITGTFLRNLGSSTGGNLLEVLLLR 416

Query: 224  DCMHLRKAEVERFISAIIAGEFKFLRHLDVSNREGLASEEDWCSRCYDPSFIPAEQLYGE 45
            DCMHL++ EV +F+SAIIAG+F+ LR LD+SNREGLASE DW  RCY+ S IP +Q+  E
Sbjct: 417  DCMHLKEVEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNSSMIPIKQVSEE 476

Query: 44   RPNFCLLAEFPVEG 3
            RP+ CLLAEFP EG
Sbjct: 477  RPDICLLAEFPSEG 490


>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score =  354 bits (908), Expect = 2e-95
 Identities = 183/285 (64%), Positives = 214/285 (75%)
 Frame = -1

Query: 857 SLKLGLMPGPTASFGSSQSCIYSTRNSADISGFSWNDKRSRQGKEXXXXXXXXXXXXXSD 678
           SLKLG++PGPT+S GS ++ +YS RNS D+S  SWNDKR+RQGKE              D
Sbjct: 172 SLKLGIVPGPTSSPGSCETLVYSIRNSVDVSNISWNDKRTRQGKESSILTRSCLYSLTGD 231

Query: 677 NGAPGELLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLI 498
           +GA G LL+RLHL NIER+DNT+L  ALS CPSLLDLEIVGLHVELRQTL SVS +C LI
Sbjct: 232 SGAAGTLLKRLHLYNIERMDNTSLYGALSACPSLLDLEIVGLHVELRQTLVSVSMNCPLI 291

Query: 497 ERLFFESSKTGRDDSLKLSPTCSDLVQNCPNLNSLALRGFKLQDFKILALIKGFRKLKHL 318
           ERLFFESSKTGRD+SLK SPTC DLV NCPNL SLALRGFKL D K+  L+KGFRKLK++
Sbjct: 292 ERLFFESSKTGRDESLK-SPTCVDLVTNCPNLTSLALRGFKLHDCKVRILVKGFRKLKYV 350

Query: 317 DFSTSYSISGAFLKKLVGGAGGNLLEVIILRDCMHLRKAEVERFISAIIAGEFKFLRHLD 138
           DFSTSYSI+G FL+ L G +GGNLLEV            EV R ++A++ G+FK LRHLD
Sbjct: 351 DFSTSYSITGHFLRNLGGSSGGNLLEV------------EVARLLTAVLTGDFKSLRHLD 398

Query: 137 VSNREGLASEEDWCSRCYDPSFIPAEQLYGERPNFCLLAEFPVEG 3
           VSNREGLASE DW  RCY    IP +Q+   RP+ CLLA+FP +G
Sbjct: 399 VSNREGLASESDWYHRCYSLRTIPVKQVLEARPDMCLLADFPPDG 443


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  307 bits (786), Expect = 2e-81
 Identities = 167/285 (58%), Positives = 190/285 (66%)
 Frame = -1

Query: 857 SLKLGLMPGPTASFGSSQSCIYSTRNSADISGFSWNDKRSRQGKEXXXXXXXXXXXXXSD 678
           SL+LG++PGPT S GSSQ  +Y+ RNS D +GFSWNDKRSRQGKE              D
Sbjct: 178 SLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGD 237

Query: 677 NGAPGELLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLI 498
           +GA G LL+RLHL NIER+DNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +CHLI
Sbjct: 238 SGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLI 297

Query: 497 ERLFFESSKTGRDDSLKLSPTCSDLVQNCPNLNSLALRGFKLQDFKILALIKGFRKLKHL 318
           ERLFFESSKTGRDDSLK SPTC DLV NCP+L SLALRGFKL D+K+  L+         
Sbjct: 298 ERLFFESSKTGRDDSLK-SPTCVDLVNNCPHLTSLALRGFKLHDYKVRILV--------- 347

Query: 317 DFSTSYSISGAFLKKLVGGAGGNLLEVIILRDCMHLRKAEVERFISAIIAGEFKFLRHLD 138
                                                K EV +F+SAIIAG+F+ LR LD
Sbjct: 348 -------------------------------------KVEVAKFLSAIIAGDFRLLRLLD 370

Query: 137 VSNREGLASEEDWCSRCYDPSFIPAEQLYGERPNFCLLAEFPVEG 3
           +SNREGLASE DW  RCY+ S IP +Q+  ERP+ CLLAEFP EG
Sbjct: 371 ISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDICLLAEFPSEG 415


>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  296 bits (757), Expect = 5e-78
 Identities = 161/286 (56%), Positives = 192/286 (67%), Gaps = 1/286 (0%)
 Frame = -1

Query: 857 SLKLGLMPGPTASFGSSQSCIYSTRNSADISGFSWNDKRSRQGKEXXXXXXXXXXXXXSD 678
           SLKLG++PGPT   GS Q  +Y  RN+ ++S FSWNDK++RQGKE              +
Sbjct: 177 SLKLGIVPGPTLPHGSCQPLVYGIRNAVEVSNFSWNDKKTRQGKESSTLTRYCLTPLSGE 236

Query: 677 NGAPGELLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLI 498
           NGA G +LR LHL NIER+DNT+L  ALS CPSLLDLEI+GLHV+LRQTL SVS +C LI
Sbjct: 237 NGAAGAVLRGLHLYNIERIDNTSLCGALSACPSLLDLEIIGLHVDLRQTLVSVSMNCPLI 296

Query: 497 ERLFFESSKTGRDDSLKLSPTCSDLVQNCPNLNSLALRGFKLQDFKILALIKGFRKLKHL 318
           ERLFFESSKTGRDDSLK S TC DLV NCPNL SLALRGFKL D+K+  L+KGF KLK++
Sbjct: 297 ERLFFESSKTGRDDSLK-SSTCVDLVNNCPNLTSLALRGFKLYDYKLRILVKGFCKLKYV 355

Query: 317 DFSTSYSISGAFLKKLVGGAGGNLLEVIILRDCMHLRKAEVERFISAIIAGEFKFLRHL- 141
           DFSTSYSI+G+FL          LL+                 ++   + G   F   L 
Sbjct: 356 DFSTSYSITGSFL-------SWKLLD-----------------YLHQFLLGTLDFFDILW 391

Query: 140 DVSNREGLASEEDWCSRCYDPSFIPAEQLYGERPNFCLLAEFPVEG 3
           D+SNREGLA+  D   RCY  S IP +Q+  ERP+ CLLAEFP EG
Sbjct: 392 DISNREGLAAAGDSYGRCYSLSIIPTKQVLEERPDICLLAEFPSEG 437


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