BLASTX nr result

ID: Cnidium21_contig00018885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018885
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL02330.1| proline rich protein 2 [Vitis vinifera]                 58   9e-07
emb|CAN75648.1| hypothetical protein VITISV_029379 [Vitis vinifera]    55   5e-06

>gb|AAL02330.1| proline rich protein 2 [Vitis vinifera]
          Length = 193

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 41/102 (40%), Positives = 49/102 (48%)
 Frame = -2

Query: 357 GAVVLTAPSLALRHPNHTPQPKYKPEFPEYGLPVHKPPPEYKLLSHKPPVPFIPQHPETS 178
           G VVLTAPSLA  +P H P   ++   PE+  PV KPPPE+K    KPP    P+H  T 
Sbjct: 12  GLVVLTAPSLA-DYPKHPP---FEKPPPEHKPPVEKPPPEHKPPMEKPP----PEHKPTP 63

Query: 177 KKKPLPLNHWPSPASSRPVYASEAPPSPSLRSGYGRMYTHRP 52
            +KP P    P P    P    + PP       YG    H P
Sbjct: 64  LEKP-PKGEKPLPEHKPPAPVGK-PPKGEKPPHYGHNPGHPP 103


>emb|CAN75648.1| hypothetical protein VITISV_029379 [Vitis vinifera]
          Length = 155

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 46/123 (37%), Positives = 49/123 (39%), Gaps = 17/123 (13%)
 Frame = -2

Query: 357 GAVVLTAPSLALRH-----------------PNHTPQPKYKPEFPEYGLPVHKPPPEYKL 229
           G VVLT PSLA  H                 P   P P+YKP  P Y  PV KPPPEY  
Sbjct: 11  GLVVLTTPSLANDHKPPPYEHKPPLPVYKSPPLGKPPPEYKPPTPVYKPPVEKPPPEY-- 68

Query: 228 LSHKPPVPFIPQHPETSKKKPLPLNHWPSPASSRPVYASEAPPSPSLRSGYGRMYTHRP* 49
              KPP P     P    +KP P    P+P    P    E PPS         MYT    
Sbjct: 69  ---KPPTPVYKSPP---VEKPPPEYKPPTPVYXXP--PVEKPPS--------MMYTDATN 112

Query: 48  HSC 40
            SC
Sbjct: 113 KSC 115


Top