BLASTX nr result

ID: Cnidium21_contig00018872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018872
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...    66   3e-09
gb|ABA42952.1| RING-H2 finger protein [Citrus trifoliata]              65   7e-09
gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]            64   1e-08
ref|XP_004162881.1| PREDICTED: uncharacterized LOC101215843 [Cuc...    64   1e-08
ref|XP_004144555.1| PREDICTED: uncharacterized protein LOC101215...    64   1e-08

>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223526146|gb|EEF28485.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 156

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = +1

Query: 4   INHLSCGHVFHKSCLEKWLKYRNITCPNCRKHMISAEDEEDTC 132
           IN LSCGH+FHK CLEKWL Y N+TCP CR  +I +E++  +C
Sbjct: 112 INCLSCGHLFHKVCLEKWLDYWNVTCPLCRSPVIPSEEDTSSC 154


>gb|ABA42952.1| RING-H2 finger protein [Citrus trifoliata]
          Length = 158

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +1

Query: 4   INHLSCGHVFHKSCLEKWLKYRNITCPNCRKHMISAEDEEDTC 132
           IN+LSCGH+FHK CLEKWL Y N+TCP CR  +I   +++ +C
Sbjct: 114 INNLSCGHLFHKVCLEKWLDYLNVTCPLCRTPLIPEFEDDPSC 156


>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = +1

Query: 4   INHLSCGHVFHKSCLEKWLKYRNITCPNCRKHMISAE 114
           INHLSCGHVFHK CLEKWLK  N+TCP CR +++  E
Sbjct: 108 INHLSCGHVFHKLCLEKWLKNWNVTCPLCRDYIMPQE 144


>ref|XP_004162881.1| PREDICTED: uncharacterized LOC101215843 [Cucumis sativus]
          Length = 160

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 4   INHLSCGHVFHKSCLEKWLKYRNITCPNCRKHMISAE 114
           INHLSCGH+FH  CLEKWL Y NITCP CR  ++S E
Sbjct: 112 INHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLMSEE 148


>ref|XP_004144555.1| PREDICTED: uncharacterized protein LOC101215843 [Cucumis sativus]
          Length = 154

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 4   INHLSCGHVFHKSCLEKWLKYRNITCPNCRKHMISAE 114
           INHLSCGH+FH  CLEKWL Y NITCP CR  ++S E
Sbjct: 112 INHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLMSEE 148


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