BLASTX nr result

ID: Cnidium21_contig00018840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018840
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513066.1| conserved hypothetical protein [Ricinus comm...   153   1e-35
emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]   149   2e-34
ref|XP_002303924.1| chromatin remodeling complex subunit [Populu...   146   2e-33
ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit...   141   5e-32
ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cuc...   141   6e-32

>ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis]
            gi|223548077|gb|EEF49569.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1322

 Score =  153 bits (387), Expect = 1e-35
 Identities = 78/98 (79%), Positives = 81/98 (82%)
 Frame = -3

Query: 302  THVFLMEPIRDRSMEEQVISRAHRMGATRPIQVETMAMNGTFEEQMLNFLQDADECRKLL 123
            THVFLMEPI DRSMEEQVISRAHRMGATRP+QVET+AM GT EEQML FLQDADECRKLL
Sbjct: 1224 THVFLMEPIWDRSMEEQVISRAHRMGATRPVQVETLAMRGTIEEQMLEFLQDADECRKLL 1283

Query: 122  KEESGKHDRESSRVRRSLHDFAESNYLT*LGFVRTVPR 9
            KEE  K D E +R RRSLHDFAE NYL  L FV   PR
Sbjct: 1284 KEEFRKPDHEGARPRRSLHDFAERNYLARLSFVHKNPR 1321


>emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
          Length = 1208

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/95 (80%), Positives = 79/95 (83%)
 Frame = -3

Query: 302  THVFLMEPIRDRSMEEQVISRAHRMGATRPIQVETMAMNGTFEEQMLNFLQDADECRKLL 123
            THVFLMEPI DRSMEEQVISRAHRMGATRPI+VET+AM GT EEQML FLQDADECR+ L
Sbjct: 1110 THVFLMEPIWDRSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFL 1169

Query: 122  KEESGKHDRESSRVRRSLHDFAESNYLT*LGFVRT 18
            KEE GK   E  R  RSLHDFAESNYL  L FVRT
Sbjct: 1170 KEEFGKPYSEGVRAHRSLHDFAESNYLAHLSFVRT 1204


>ref|XP_002303924.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222841356|gb|EEE78903.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1333

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/98 (75%), Positives = 80/98 (81%)
 Frame = -3

Query: 302  THVFLMEPIRDRSMEEQVISRAHRMGATRPIQVETMAMNGTFEEQMLNFLQDADECRKLL 123
            THVFLMEPI DRSMEEQVISRAHRMGATRPI VET+AM GT EEQML FLQDAD CR++L
Sbjct: 1235 THVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLEFLQDADGCRRVL 1294

Query: 122  KEESGKHDRESSRVRRSLHDFAESNYLT*LGFVRTVPR 9
            KEES K D   +R+ RSLHDFAES+YL  L FV T  R
Sbjct: 1295 KEESSKTDHAGARLHRSLHDFAESDYLAHLSFVHTGSR 1332


>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/87 (81%), Positives = 74/87 (85%)
 Frame = -3

Query: 302  THVFLMEPIRDRSMEEQVISRAHRMGATRPIQVETMAMNGTFEEQMLNFLQDADECRKLL 123
            THVFLMEPI DRSMEEQVISRAHRMGATRPI+VET+AM GT EEQML FLQDADECR+ L
Sbjct: 1299 THVFLMEPIWDRSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFL 1358

Query: 122  KEESGKHDRESSRVRRSLHDFAESNYL 42
            KEE GK   E  R  RSLHDFAESNYL
Sbjct: 1359 KEEFGKPYSEGVRAHRSLHDFAESNYL 1385


>ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cucumis sativus]
          Length = 1366

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/100 (71%), Positives = 80/100 (80%)
 Frame = -3

Query: 302  THVFLMEPIRDRSMEEQVISRAHRMGATRPIQVETMAMNGTFEEQMLNFLQDADECRKLL 123
            T+VFLMEPI DRSMEEQVISRAHRMGA RPI VET+ M+ T EEQM+ FLQD DEC++L+
Sbjct: 1261 TYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEEQMVQFLQDPDECKRLM 1320

Query: 122  KEESGKHDRESSRVRRSLHDFAESNYLT*LGFVRTVPRLE 3
            KEE GK D E  R  RSLHDFA SNYL+ L FVRT P +E
Sbjct: 1321 KEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVRTKPTME 1360


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