BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018776
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Gly...    44   3e-07
ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Gly...    43   6e-07
gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]              39   9e-07
ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana] ...    39   9e-07
gb|AAM97049.1| unknown protein [Arabidopsis thaliana] gi|2319793...    39   9e-07

>ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
          Length = 1065

 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = -1

Query: 197 NQAKLEHG-GAVGSKEGTIFRERARLHQRQAERVKCDKLE 81
           N +K+EH   AVGS E  IF++RARLHQRQ ER+K +K +
Sbjct: 384 NLSKVEHFIQAVGSYEDKIFQKRARLHQRQTERIKREKAQ 423



 Score = 35.4 bits (80), Expect(2) = 3e-07
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -3

Query: 87  ARVKGGDDVEPQITSD-MVLVSKFHGSRLA 1
           A+ + GDD EPQ   + +V VS+FHGSRLA
Sbjct: 422 AQARRGDDAEPQFKPESLVAVSRFHGSRLA 451


>ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
          Length = 1075

 Score = 42.7 bits (99), Expect(2) = 6e-07
 Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = -1

Query: 197 NQAKLEHG-GAVGSKEGTIFRERARLHQRQAERVKCDKLE 81
           N +++EH   AVGS E  IF++RARLHQRQ ER+K +K +
Sbjct: 384 NLSRVEHFIQAVGSYEDKIFQKRARLHQRQTERIKREKAQ 423



 Score = 35.4 bits (80), Expect(2) = 6e-07
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -3

Query: 87  ARVKGGDDVEPQITSD-MVLVSKFHGSRLA 1
           A+ + GDD EPQ   + +V VS+FHGSRLA
Sbjct: 422 AQARRGDDAEPQFQPESLVAVSRFHGSRLA 451


>gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
          Length = 1037

 Score = 39.3 bits (90), Expect(3) = 9e-07
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = -1

Query: 170 AVGSKEGTIFRERARLHQRQAERVKCDK 87
           AVGS E  IF++RA  HQRQAERVK DK
Sbjct: 396 AVGSFEDKIFQKRAMQHQRQAERVKRDK 423



 Score = 29.6 bits (65), Expect(3) = 9e-07
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 211 YLTDGIKPNLSTVEQWDQ 158
           YLTDG KPNL  VEQ+ Q
Sbjct: 378 YLTDGCKPNLKRVEQFIQ 395



 Score = 27.7 bits (60), Expect(3) = 9e-07
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 69  DDVEPQITSDMVLVSKFHGSRLA 1
           DD  P +  D+V V++F GSRLA
Sbjct: 432 DDEAPTVQPDLVPVARFSGSRLA 454


>ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
           gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3'
           exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE
           3 gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis
           thaliana] gi|332197621|gb|AEE35742.1| 5'-3'
           exoribonuclease 3 [Arabidopsis thaliana]
          Length = 1020

 Score = 39.3 bits (90), Expect(3) = 9e-07
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = -1

Query: 170 AVGSKEGTIFRERARLHQRQAERVKCDK 87
           AVGS E  IF++RA  HQRQAERVK DK
Sbjct: 396 AVGSFEDKIFQKRAMQHQRQAERVKRDK 423



 Score = 29.6 bits (65), Expect(3) = 9e-07
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 211 YLTDGIKPNLSTVEQWDQ 158
           YLTDG KPNL  VEQ+ Q
Sbjct: 378 YLTDGCKPNLKRVEQFIQ 395



 Score = 27.7 bits (60), Expect(3) = 9e-07
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 69  DDVEPQITSDMVLVSKFHGSRLA 1
           DD  P +  D+V V++F GSRLA
Sbjct: 432 DDEAPTVQPDLVPVARFSGSRLA 454


>gb|AAM97049.1| unknown protein [Arabidopsis thaliana] gi|23197934|gb|AAN15494.1|
           unknown protein [Arabidopsis thaliana]
          Length = 763

 Score = 39.3 bits (90), Expect(3) = 9e-07
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = -1

Query: 170 AVGSKEGTIFRERARLHQRQAERVKCDK 87
           AVGS E  IF++RA  HQRQAERVK DK
Sbjct: 396 AVGSFEDKIFQKRAMQHQRQAERVKRDK 423



 Score = 29.6 bits (65), Expect(3) = 9e-07
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 211 YLTDGIKPNLSTVEQWDQ 158
           YLTDG KPNL  VEQ+ Q
Sbjct: 378 YLTDGCKPNLKRVEQFIQ 395



 Score = 27.7 bits (60), Expect(3) = 9e-07
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 69  DDVEPQITSDMVLVSKFHGSRLA 1
           DD  P +  D+V V++F GSRLA
Sbjct: 432 DDEAPTVQPDLVPVARFSGSRLA 454