BLASTX nr result

ID: Cnidium21_contig00018767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018767
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279431.1| PREDICTED: transmembrane 9 superfamily membe...    85   2e-19
ref|XP_002527407.1| Endosomal P24A protein precursor, putative [...    83   4e-17
ref|XP_003529871.1| PREDICTED: transmembrane 9 superfamily membe...    79   7e-16
ref|XP_004155934.1| PREDICTED: LOW QUALITY PROTEIN: transmembran...    75   2e-15
ref|XP_004141678.1| PREDICTED: transmembrane 9 superfamily membe...    75   2e-15

>ref|XP_002279431.1| PREDICTED: transmembrane 9 superfamily member 4 isoform 1 [Vitis
           vinifera] gi|147784283|emb|CAN70590.1| hypothetical
           protein VITISV_026732 [Vitis vinifera]
           gi|297743079|emb|CBI35946.3| unnamed protein product
           [Vitis vinifera]
          Length = 634

 Score = 84.7 bits (208), Expect(2) = 2e-19
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +3

Query: 276 GVAPRDFTRGDPLQVKVNKLSSTKTQLPYDYYYLKFCKPQK 398
           GVAPRDF RGDPLQVKVNKLSSTKTQLPYDYYYLK+CKP+K
Sbjct: 25  GVAPRDFERGDPLQVKVNKLSSTKTQLPYDYYYLKWCKPKK 65



 Score = 35.8 bits (81), Expect(2) = 2e-19
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +2

Query: 107 NRVISPIIFFFILVSSAHSFYLPGV 181
           +R    + FF +L+SSAHSFYLPGV
Sbjct: 2   DRSSKTLFFFVLLISSAHSFYLPGV 26


>ref|XP_002527407.1| Endosomal P24A protein precursor, putative [Ricinus communis]
           gi|223533217|gb|EEF34973.1| Endosomal P24A protein
           precursor, putative [Ricinus communis]
          Length = 639

 Score = 82.8 bits (203), Expect(2) = 4e-17
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +3

Query: 276 GVAPRDFTRGDPLQVKVNKLSSTKTQLPYDYYYLKFCKPQK 398
           GVAPRDF RGDPL VKVNKLSSTKTQLPYDYYYLK+CKP K
Sbjct: 30  GVAPRDFHRGDPLSVKVNKLSSTKTQLPYDYYYLKYCKPNK 70



 Score = 30.0 bits (66), Expect(2) = 4e-17
 Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
 Frame = +2

Query: 119 SPIIFFFILV--SSAHSFYLPGV 181
           S +IFFF ++  SSA+SFYLPGV
Sbjct: 9   SKMIFFFAVLFFSSAYSFYLPGV 31


>ref|XP_003529871.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 640

 Score = 79.0 bits (193), Expect(2) = 7e-16
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 276 GVAPRDFTRGDPLQVKVNKLSSTKTQLPYDYYYLKFCKPQK 398
           GVAPRDF  GDPL VKVNKLSSTKTQLPYDYY+LK+CKP+K
Sbjct: 31  GVAPRDFQIGDPLSVKVNKLSSTKTQLPYDYYFLKYCKPKK 71



 Score = 29.6 bits (65), Expect(2) = 7e-16
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 95  RLHSNRVISPIIFFFILVSSAHSFYLPGV 181
           ++ ++  IS +     L SS HSFYLPGV
Sbjct: 4   KMMASTAISVVFAALFLFSSVHSFYLPGV 32


>ref|XP_004155934.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane 9 superfamily member
           4-like [Cucumis sativus]
          Length = 643

 Score = 75.1 bits (183), Expect(2) = 2e-15
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +3

Query: 276 GVAPRDFTRGDPLQVKVNKLSSTKTQLPYDYYYLKFCKPQK 398
           GVAPRDF  GD L VKVNKLSSTKTQLPYDYYYL +CKP+K
Sbjct: 34  GVAPRDFQTGDILPVKVNKLSSTKTQLPYDYYYLNYCKPKK 74



 Score = 31.6 bits (70), Expect(2) = 2e-15
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 116 ISPIIFFFILVSSAHSFYLPGV 181
           +S +    +L+SS HSFYLPGV
Sbjct: 14  LSTLFLLLLLISSVHSFYLPGV 35


>ref|XP_004141678.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis
           sativus]
          Length = 643

 Score = 75.1 bits (183), Expect(2) = 2e-15
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +3

Query: 276 GVAPRDFTRGDPLQVKVNKLSSTKTQLPYDYYYLKFCKPQK 398
           GVAPRDF  GD L VKVNKLSSTKTQLPYDYYYL +CKP+K
Sbjct: 34  GVAPRDFQTGDILPVKVNKLSSTKTQLPYDYYYLNYCKPKK 74



 Score = 31.6 bits (70), Expect(2) = 2e-15
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 116 ISPIIFFFILVSSAHSFYLPGV 181
           +S +    +L+SS HSFYLPGV
Sbjct: 14  LSTLFLLLLLISSVHSFYLPGV 35


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