BLASTX nr result

ID: Cnidium21_contig00018732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018732
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
dbj|BAE73187.1| KANADI-like transcription factor FEATHERED [Ipom...    62   6e-08
ref|XP_003600664.1| KANADI like transcription factor [Medicago t...    60   1e-07
emb|CBI28638.3| unnamed protein product [Vitis vinifera]               59   4e-07

>ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|222844638|gb|EEE82185.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/111 (39%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
 Frame = +3

Query: 117 HHATSSTMDASSLRPIKGIPVYQNRSFPFLPLDHHHPSREKIDPKMCLYPMQXXXXXXXX 296
           +H  S    +  LRPIKGIPVY NRSFPF+PL+  H SRE  DPKMC Y M         
Sbjct: 134 NHGVSLLEVSDGLRPIKGIPVYHNRSFPFMPLE--HSSRENKDPKMCFYQMPYPSSSLCS 191

Query: 297 XXXXXXXXAN-----------LDQMSSILNTSAPNGSFSGDYRIPGGASRF 416
                   ++           LD M S+LN+S PN +  G Y      +RF
Sbjct: 192 PSVNPHSSSSTSSPYSIGGGGLDPM-SMLNSSGPNQALPGPYNRLAPTTRF 241


>ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|222848199|gb|EEE85746.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/110 (40%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
 Frame = +3

Query: 117 HHATSSTMDASSLRPIKGIPVYQNRSFPFLPLDHHHPSREKIDPKMCLYPMQXXXXXXXX 296
           +H  S    +  LRPIKGIPVY NRSFPF PL+  H SRE  DPKMC Y M         
Sbjct: 138 NHGVSLLEVSDGLRPIKGIPVYHNRSFPFTPLE--HSSRENKDPKMCFYQMPYPSSSFFR 195

Query: 297 XXXXXXXXA----------NLDQMSSILNTSAPNGSFSGDYRIPGGASRF 416
                   +           LD M S+LN+S PN +  G Y      +RF
Sbjct: 196 PVNPHSSSSTSLPYSIGGGGLDPM-SMLNSSGPNQALPGPYNRLAPTTRF 244


>dbj|BAE73187.1| KANADI-like transcription factor FEATHERED [Ipomoea nil]
           gi|84778270|dbj|BAE73188.1| KANADI-like transcription
           factor FEATHERED [Ipomoea nil]
          Length = 478

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/103 (40%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = +3

Query: 117 HHATSSTMDASSLRPIKGIPVYQNRSFPFLPLDHHHPSREKIDP-KMCLYPMQXXXXXXX 293
           +H  S    +  LRPIKGIPVYQNRSFPFLP+D     RE  DP KMC YPM        
Sbjct: 140 NHGVSLLDVSDGLRPIKGIPVYQNRSFPFLPMD-----RENKDPSKMCFYPMPPPPPPTA 194

Query: 294 XXXXXXXXXAN--LDQMSSILNTSAPNGSFSGDYRIPGGASRF 416
                     N  +D + S+LN  +P+ S S          RF
Sbjct: 195 SISHSPSPFFNPVVDHL-SLLNNPSPSSSSSSAAAAAAAYRRF 236


>ref|XP_003600664.1| KANADI like transcription factor [Medicago truncatula]
           gi|355489712|gb|AES70915.1| KANADI like transcription
           factor [Medicago truncatula]
          Length = 499

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
 Frame = +3

Query: 15  QPYNTTTELSLTXXXXXXXXXXXXSTQERAHRPFHHATSSTMDASS-----LRPIKGIPV 179
           Q +N+TT  + T            +T   +H    +   S +D SS     LRPIKGIPV
Sbjct: 102 QHHNSTTTTTST------------TTNSSSHMNHINYGVSLLDVSSTSSEGLRPIKGIPV 149

Query: 180 YQNRSFPFLPLDHHHPSREKIDPKMCLY 263
           Y NRSFPFLP   H  SREK DPKMCLY
Sbjct: 150 YHNRSFPFLPAMEH--SREK-DPKMCLY 174


>emb|CBI28638.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/94 (43%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
 Frame = +3

Query: 93  QERAHRPFHHATS---------STMDASS-LRPIKGIPVYQNRSFPFLPLDHHHPSREKI 242
           Q R H   HH  +         S +D S  LRPIKGIPVY NRSFPFLPLDH   SREK 
Sbjct: 107 QNRHHHLSHHPNNNLNHINHGVSLLDVSDVLRPIKGIPVYHNRSFPFLPLDH---SREK- 162

Query: 243 DPKMCLYPMQXXXXXXXXXXXXXXXXANLDQMSS 344
           D +M LY +                 A L+ +SS
Sbjct: 163 DSRMNLYQLSYPSWSSSLAPSSSSAAARLNGLSS 196


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