BLASTX nr result

ID: Cnidium21_contig00018724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018724
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43045.1| unknown [Lotus japonicus]                               80   7e-13
gb|AAW82340.1| coat protein [Lettuce big-vein associated virus]        68   5e-09
dbj|BAD95901.1| coat protein [Tobacco stunt virus]                     68   5e-09
gb|ADA60175.1| coat protein [Lettuce big-vein associated virus]        67   1e-08
gb|AAW82344.1| coat protein [Lettuce big-vein associated virus]        66   2e-08

>gb|AFK43045.1| unknown [Lotus japonicus]
          Length = 166

 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
 Frame = -3

Query: 779 QTLRNTFYNLVYAGESVGNGKQLKEFLYRSHISYTGMHSYVLFLKCMEAFKVTNNQLINV 600
           Q  + T + L+YA  S      LK FLY  H++  G+H   + ++  +   V   +LI++
Sbjct: 2   QKYKVTLFKLLYASSSNNRALGLKRFLYDLHLANPGLHVVNISIRLCKVLNVPGQKLIDI 61

Query: 599 LRTPYFAAELNALEVIFNNLFLSSEQPEMKRQMWKYARVFDSRFLNQLQTKNCGVFTAVL 420
           +    F  +  AL  +   + + ++  + KR+MW++ R+FDS F+ +LQTK C     +L
Sbjct: 62  MNVGEFRRQAVALAEMIRLVVIKAD--DHKRKMWRFGRIFDSTFMAELQTKACSKLVYIL 119

Query: 419 AHLYHSIIPARGNQDARNITKVTELSKD-QHKIA 321
           A+   S  P  GN++  +I ++   S D +HK++
Sbjct: 120 AYALKSEQP-HGNENILDIVQLQNFSPDMKHKLS 152


>gb|AAW82340.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
 Frame = -3

Query: 953 YLATSYMRLYTKSAVDYTRVEDQ--LRNRFTNFYDYALPLENFHPVPEAVNCIKTHINLN 780
           ++A S ++++ KS   +T+  +   ++ R+ +F     P + F    +    +       
Sbjct: 137 FIAASTLKMFAKSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQ 196

Query: 779 QTLRNTFYNLVYAGESVGNGKQLKEFLYRSHISYTGMHSYVLFLKCMEAFKVTNNQLINV 600
           +  + T   ++YA E V + +Q  E L+  H++ TGMH    F     +   T   L++ 
Sbjct: 197 KLYQGTLGRILYALEDVTDPRQT-EMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSA 255

Query: 599 LRTPYFAAELNALEVIFNNLFLSSEQPEMKRQMWKYARVFDSRFLNQLQTKNCGVFTAVL 420
           L        L  L+ + N        P+  R  W++AR+FD      LQTK C    A+L
Sbjct: 256 LNYGQNFGTLMQLKKLINESLSKPPGPD-NRATWRFARIFDPSVFQTLQTKYCADTVAIL 314

Query: 419 AHLYHSIIPARGNQDARNITKVTELSKDQHKIAKEFAR 306
           A++      +    +  NI  + +++ ++ +  ++ A+
Sbjct: 315 ANINSMGKLSTETSNPLNIAVLKQMAPERKRYTRQVAK 352


>dbj|BAD95901.1| coat protein [Tobacco stunt virus]
          Length = 397

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
 Frame = -3

Query: 953 YLATSYMRLYTKSAVDYTRVEDQ--LRNRFTNFYDYALPLENFHPVPEAVNCIKTHINLN 780
           ++A S ++++ KS   +T+  +   ++ R+ +F     P + F    +    +       
Sbjct: 137 FIAASTLKMFAKSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNAKCAETMYEAYQGQ 196

Query: 779 QTLRNTFYNLVYAGESVGNGKQLKEFLYRSHISYTGMHSYVLFLKCMEAFKVTNNQLINV 600
           +  + TF  ++YA   V + +Q  E L+  H++ TGMH    F     +   T   L++ 
Sbjct: 197 KLYQGTFGRILYALGDVADPRQT-EMLFDQHLANTGMHIIPQFTNAQLSIGATTAGLLSA 255

Query: 599 LRTPYFAAELNALEVIFNNLFLSSEQPEMKRQMWKYARVFDSRFLNQLQTKNCGVFTAVL 420
           L        L  L+ + N        P+  R  W++AR+FD      LQTK C    A+L
Sbjct: 256 LNYGQNFGTLMQLKKLINESLSKPPGPDT-RATWRFARIFDPSVFQTLQTKYCADTVAIL 314

Query: 419 AHLYHSIIPARGNQDARNITKVTELSKDQHKIAKEFAR 306
           A++      +    +  NI  + +++ ++ +  ++ A+
Sbjct: 315 ANINSMGKLSTETSNPLNIAVLKQMAPERKRYTRQVAK 352


>gb|ADA60175.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 46/218 (21%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
 Frame = -3

Query: 953 YLATSYMRLYTKSAVDYTRVEDQ--LRNRFTNFYDYALPLENFHPVPEAVNCIKTHINLN 780
           ++A S ++++ KS   +T+  +   ++ R+ +F     P + F    +    +       
Sbjct: 137 FIAASTLKMFAKSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQ 196

Query: 779 QTLRNTFYNLVYAGESVGNGKQLKEFLYRSHISYTGMHSYVLFLKCMEAFKVTNNQLINV 600
           +  + T   ++YA   V + +Q  E L+  H++ TGMH    F     +   T   L++ 
Sbjct: 197 KLYQGTLGRILYALGDVADPRQT-EMLFDQHLASTGMHIIPQFTNAQPSIGATTAGLLSA 255

Query: 599 LRTPYFAAELNALEVIFNNLFLSSEQPEMKRQMWKYARVFDSRFLNQLQTKNCGVFTAVL 420
           L        L  L+ + N        P+  R  W++AR+FD      LQTK C    A+L
Sbjct: 256 LNYGQNFGTLMQLKKLINESLSKPPGPD-NRATWRFARIFDPSVFQTLQTKYCADTVAIL 314

Query: 419 AHLYHSIIPARGNQDARNITKVTELSKDQHKIAKEFAR 306
           A++      +    +  NI  + +++ ++ +  ++ A+
Sbjct: 315 ANINSMGKLSTETSNPLNIAVLKQMAPERKRYTRQVAK 352


>gb|AAW82344.1| coat protein [Lettuce big-vein associated virus]
          Length = 397

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 46/218 (21%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
 Frame = -3

Query: 953 YLATSYMRLYTKSAVDYTRVEDQ--LRNRFTNFYDYALPLENFHPVPEAVNCIKTHINLN 780
           ++A S ++++ KS   +T+  +   ++ R+ +F     P + F    +    +       
Sbjct: 137 FIAASTLKMFAKSFTGWTQAWEHKHIQKRYADFCKTEYPFKEFTTNTKCAETMYEAYQGQ 196

Query: 779 QTLRNTFYNLVYAGESVGNGKQLKEFLYRSHISYTGMHSYVLFLKCMEAFKVTNNQLINV 600
           +  +     ++YA E V + +Q+ E L   H++ TGMH    F     +   T   L++ 
Sbjct: 197 KLFQGALGGILYALEDVTDPRQI-EMLLDQHLANTGMHIIPQFTNAQLSIGATTAGLLSA 255

Query: 599 LRTPYFAAELNALEVIFNNLFLSSEQPEMKRQMWKYARVFDSRFLNQLQTKNCGVFTAVL 420
           L        L  L+ + N        P+  R  W++AR+FD      LQTK C    A+L
Sbjct: 256 LNYGQNFGTLMQLKKLINESLSKPPGPD-NRATWRFARIFDPSVFQTLQTKYCADTVAIL 314

Query: 419 AHLYHSIIPARGNQDARNITKVTELSKDQHKIAKEFAR 306
           A++      +    +  NI  + +++ ++ +  ++ A+
Sbjct: 315 ANINSMGKLSTETSNPLNIAVLKQMAPERKRYTRQVAK 352


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