BLASTX nr result

ID: Cnidium21_contig00018707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018707
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336026.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06
ref|XP_002328405.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002336026.1| predicted protein [Populus trichocarpa] gi|222838883|gb|EEE77234.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
 Frame = -1

Query: 512 YGLRGKKEAPQRSSTIEYKSPFDSYHAVE--THNPFHD--STTSLVNRYLLPSSEPVENK 345
           Y   G++E P   ++I   S   +  A++  T +P++      S  + Y+ P   P  ++
Sbjct: 489 YNSSGRRELPPAVTSIPPTSSGSALAALDPYTRDPYYTYHHGASSADAYVPP---PRRDE 545

Query: 344 QLSQTYGNDSRSN--------FSRVASDERERLYSRYSSGFLSNYNK--DYHHLAGEVGL 195
             S +Y  D R            R  +D+  RLYS ++S  LSNYNK   YH    E   
Sbjct: 546 LSSGSYYVDGRRETYLFEADPLRRREADQEGRLYSTHASDALSNYNKLLQYHGAKPETAP 605

Query: 194 RSSPVSSRYSFAGPSVSYR 138
            S  VSSRYSFAGPSV YR
Sbjct: 606 PS--VSSRYSFAGPSVYYR 622


>ref|XP_002328405.1| predicted protein [Populus trichocarpa] gi|222838120|gb|EEE76485.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
 Frame = -1

Query: 512 YGLRGKKEAPQRSSTIEYKSPFDSYHAVE--THNPFHD--STTSLVNRYLLPSSEPVENK 345
           Y   G++E P   ++I   S   +  A++  T +P++      S  + Y+ P   P  ++
Sbjct: 478 YNSSGRRELPPAVTSIPPTSSGSALAALDPYTRDPYYTYHHGASSADAYVPP---PRRDE 534

Query: 344 QLSQTYGNDSRSN--------FSRVASDERERLYSRYSSGFLSNYNK--DYHHLAGEVGL 195
             S +Y  D R            R  +D+  RLYS ++S  LSNYNK   YH    E   
Sbjct: 535 LSSGSYYVDGRRETYLFEADPLRRREADQEGRLYSTHASDALSNYNKLLQYHGAKPETAP 594

Query: 194 RSSPVSSRYSFAGPSVSYR 138
            S  VSSRYSFAGPSV YR
Sbjct: 595 PS--VSSRYSFAGPSVYYR 611


Top