BLASTX nr result

ID: Cnidium21_contig00018663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018663
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arab...    59   2e-06
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    58   3e-06
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...    58   3e-06
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...    58   3e-06
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...    58   3e-06

>ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
           lyrata] gi|297338198|gb|EFH68615.1| hypothetical protein
           ARALYDRAFT_470695 [Arabidopsis lyrata subsp. lyrata]
          Length = 1148

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -1

Query: 155 QVLLKRHRWHKKVLKTRDPIIVLIVSIGWRRYQ 57
           Q  LKRHRWHKKVLKTRDPI   IVSIGWRRYQ
Sbjct: 794 QARLKRHRWHKKVLKTRDPI---IVSIGWRRYQ 823


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -1

Query: 155 QVLLKRHRWHKKVLKTRDPIIVLIVSIGWRRYQ 57
           QV +KRHRWHKK+LKTRDPI   IVSIGWRRYQ
Sbjct: 779 QVRIKRHRWHKKLLKTRDPI---IVSIGWRRYQ 808


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -1

Query: 155 QVLLKRHRWHKKVLKTRDPIIVLIVSIGWRRYQ 57
           Q  LKRHRWHKKVLKTRDPI   IVS+GWRRYQ
Sbjct: 818 QARLKRHRWHKKVLKTRDPI---IVSVGWRRYQ 847


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -1

Query: 155 QVLLKRHRWHKKVLKTRDPIIVLIVSIGWRRYQ 57
           Q  LKRHRWHKKVLKTRDPI   IVS+GWRRYQ
Sbjct: 813 QARLKRHRWHKKVLKTRDPI---IVSVGWRRYQ 842


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 988

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -1

Query: 155 QVLLKRHRWHKKVLKTRDPIIVLIVSIGWRRYQ 57
           Q  LKRHRWHKKVLKTRDPI   IVS+GWRRYQ
Sbjct: 814 QARLKRHRWHKKVLKTRDPI---IVSVGWRRYQ 843


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