BLASTX nr result

ID: Cnidium21_contig00018655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018655
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...    72   5e-11
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...    72   6e-11
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...    72   6e-11
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]    72   6e-11
ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...    70   1e-10

>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/85 (51%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
 Frame = +3

Query: 6    RQILAGQGKRTKQSNEVDPDLSHRQKPLSRAP-HSNEDTRIRSHTPHRETRF---RNSNR 173
            RQ   GQ KR +  NEV+PD     KP+ R    S +DTR++ H P +ETR      S R
Sbjct: 2078 RQAAVGQSKRHRLINEVEPDNGSAHKPIQRGSIPSGDDTRVKVHLP-KETRHGTGSGSTR 2136

Query: 174  ELGQQEDSSLLAHPGELVICKKKRK 248
            E  QQ+DS L  HPGELVICKKKRK
Sbjct: 2137 EQYQQDDSPL--HPGELVICKKKRK 2159


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
 Frame = +3

Query: 6    RQILAGQGKRTKQSNEVDPDLSHRQKPLSR--------APHSNEDTRIRSHTPHRETRFR 161
            RQ   GQGKR K  NEV+PD S   K L R        A  ++EDTR +SH   +E+R  
Sbjct: 2088 RQAAVGQGKRHKPINEVEPDPSPPPKQLLRGAAAAAAAAAAASEDTRAKSHISQKESRLG 2147

Query: 162  NSNRELGQQEDSSLLAHPGELVICKKKRK 248
            +S+     Q+DS LL HPG+LVI KKKRK
Sbjct: 2148 SSSSR--DQDDSPLLTHPGDLVISKKKRK 2174


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
 Frame = +3

Query: 6    RQILAGQGKRTKQSNEVDPDLSHRQKPLSR-APHSNEDTRIRSHTPHRETRFRN----SN 170
            RQ+  GQ KR K  NE++ +    Q+ L R +  S+E+ RI+ H P RE+R  +    S 
Sbjct: 2063 RQVAVGQSKRHKLINEMETESYALQRSLQRGSASSSENNRIKVHLPQRESRTGSGGGSST 2122

Query: 171  RELGQQEDSSLLAHPGELVICKKKR 245
            RE  QQ+DSSLLAHPGELV+CKK+R
Sbjct: 2123 REQ-QQDDSSLLAHPGELVVCKKRR 2146


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
 Frame = +3

Query: 6    RQILAGQGKRTKQSNEVDPDLSHRQKPLSR--------APHSNEDTRIRSHTPHRETRFR 161
            RQ   GQGKR K  NEV+PD S   K L R        A  ++EDTR +SH   +E+R  
Sbjct: 2063 RQAAVGQGKRHKPINEVEPDPSPPPKQLLRGAAAAAAAAAAASEDTRAKSHISQKESRLG 2122

Query: 162  NSNRELGQQEDSSLLAHPGELVICKKKRK 248
            +S+     Q+DS LL HPG+LVI KKKRK
Sbjct: 2123 SSSSR--DQDDSPLLTHPGDLVISKKKRK 2149


>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
            gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
            [Medicago truncatula]
          Length = 2175

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
 Frame = +3

Query: 6    RQILAGQGKRTKQSNEVDPDLSHRQKPLSR-APHSNEDTRIRSHTPHRETR----FRNSN 170
            RQ+  GQGKR +  NEV+PD    Q+ L R +  S E++RIR   P +E+R      +S 
Sbjct: 2014 RQVAVGQGKRHRLVNEVEPDSHPSQRQLQRGSASSGENSRIRVRVPPKESRSGYGSGSSI 2073

Query: 171  RELGQQEDSS--LLAHPGELVICKKKR 245
            RE  QQ+D S  LL HPGELV+CKK+R
Sbjct: 2074 REQPQQQDDSPPLLTHPGELVVCKKRR 2100


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