BLASTX nr result

ID: Cnidium21_contig00018647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018647
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycin...   193   1e-47
ref|XP_003629730.1| Peptidyl-tRNA hydrolase [Medicago truncatula...   192   3e-47
ref|XP_003524957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   188   5e-46
ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   187   1e-45
gb|ACU21547.1| unknown [Glycine max]                                  184   9e-45

>ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycine max]
           gi|255645293|gb|ACU23143.1| unknown [Glycine max]
          Length = 218

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/114 (78%), Positives = 100/114 (87%)
 Frame = +2

Query: 32  MLSRIARRGFCTVTPQPWLFIGLGNPGDMYKTTRQNVGFKMIDAFAKSQGILMDTFHFNA 211
           ML R++RR FCT TP+PWLF+GLGNPGD +K TR NVGF+MIDAFA+SQGI MDT H  A
Sbjct: 1   MLHRLSRRCFCTFTPRPWLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60

Query: 212 LFGKGFVGRVPVLLAKPQTYMNLSGECTGPLAAYYKLPLTRVVVFHDDMDLPCG 373
           +FGKGFVG VPV LAKPQTYMNLSGE TGPLAAYYKLPL +V+VFHDDM+LPCG
Sbjct: 61  IFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCG 114


>ref|XP_003629730.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
           gi|355523752|gb|AET04206.1| Peptidyl-tRNA hydrolase
           [Medicago truncatula]
          Length = 403

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/114 (77%), Positives = 98/114 (85%)
 Frame = +2

Query: 32  MLSRIARRGFCTVTPQPWLFIGLGNPGDMYKTTRQNVGFKMIDAFAKSQGILMDTFHFNA 211
           MLS + +R FCTV P+PWLF+GLGNPGD YK TR NVGF+MIDAFA+SQGI MDT H  A
Sbjct: 1   MLSTLTKRSFCTVAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIAMDTVHCKA 60

Query: 212 LFGKGFVGRVPVLLAKPQTYMNLSGECTGPLAAYYKLPLTRVVVFHDDMDLPCG 373
           +FGKGFVG VPV LAKPQTYMNLSGE  GPLAAYYKLPL +V+VFHDDM+LPCG
Sbjct: 61  IFGKGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNQVLVFHDDMNLPCG 114


>ref|XP_003524957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Glycine
           max]
          Length = 217

 Score =  188 bits (477), Expect = 5e-46
 Identities = 87/114 (76%), Positives = 99/114 (86%)
 Frame = +2

Query: 32  MLSRIARRGFCTVTPQPWLFIGLGNPGDMYKTTRQNVGFKMIDAFAKSQGILMDTFHFNA 211
           ML+R+ RR FCTV P+PWLF+GLGNPG+ +K TR NVGF+MIDAFA+SQGI MDT H  A
Sbjct: 1   MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60

Query: 212 LFGKGFVGRVPVLLAKPQTYMNLSGECTGPLAAYYKLPLTRVVVFHDDMDLPCG 373
           + GKGFVG VPV LAKPQTYMNLSGE TGPLAAYYKLPL +V+VFHDDM+LPCG
Sbjct: 61  ISGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCG 114


>ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Vitis vinifera]
           gi|297746470|emb|CBI16526.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/114 (76%), Positives = 97/114 (85%)
 Frame = +2

Query: 32  MLSRIARRGFCTVTPQPWLFIGLGNPGDMYKTTRQNVGFKMIDAFAKSQGILMDTFHFNA 211
           ML+R +RR FCT +P+PWLF+GLGNPGD YK TR NVGF+MI+AFA+SQGI MDT H  A
Sbjct: 1   MLNRFSRRLFCTASPRPWLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKA 60

Query: 212 LFGKGFVGRVPVLLAKPQTYMNLSGECTGPLAAYYKLPLTRVVVFHDDMDLPCG 373
           +FG+GFV  VPV LAKPQTYMNLSGE  GPLAAYYKLPL RVVVFHDDM LPCG
Sbjct: 61  IFGQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVVVFHDDMSLPCG 114


>gb|ACU21547.1| unknown [Glycine max]
          Length = 202

 Score =  184 bits (466), Expect = 9e-45
 Identities = 85/114 (74%), Positives = 97/114 (85%)
 Frame = +2

Query: 32  MLSRIARRGFCTVTPQPWLFIGLGNPGDMYKTTRQNVGFKMIDAFAKSQGILMDTFHFNA 211
           ML+R+ RR FCTV P+PWLF+GLGNPG+ +K TR NVGF+MIDA A+SQGI MDT H  A
Sbjct: 1   MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHNVGFEMIDALAESQGIPMDTVHSKA 60

Query: 212 LFGKGFVGRVPVLLAKPQTYMNLSGECTGPLAAYYKLPLTRVVVFHDDMDLPCG 373
           + GKGFVG VPV LAKPQTYMNLSGE  GPLAAYYKLPL +V+VFHDDM+LPCG
Sbjct: 61  ISGKGFVGEVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNQVLVFHDDMNLPCG 114


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