BLASTX nr result

ID: Cnidium21_contig00018606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018606
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   155   1e-35
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   122   1e-25
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   112   9e-23
ref|XP_003605496.1| hypothetical protein MTR_4g032310 [Medicago ...   112   9e-23
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   110   4e-22

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  155 bits (391), Expect = 1e-35
 Identities = 88/276 (31%), Positives = 134/276 (48%)
 Frame = -1

Query: 868  LISRRVEVSLICMVCNKEPESPVHTLLHCKFAMEVWAIFPGSLIRTHFMSLFDWSNNLET 689
            L  R V+  + C +C  E E+ +H L+ C  A +VW     ++++ +F S  DW   +  
Sbjct: 538  LTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFA 597

Query: 688  NKLKEEMELVCVVGWYIWKNMNEVVWNNRWGKPDVVIRQAKESLTQWYKAQKTQLLVGSG 509
                        V W +W   N+VVWN R      V+      L  W+ A +T  L  + 
Sbjct: 598  YCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANET--LATAV 655

Query: 508  TGSSAEEKWIKPTHGMLKCNVDASIFPDKGYSSFGFVIKDANGVCVKALNGAFRGIFATM 329
            T  S   KW KP +G +K NVD ++FPDKG  + G V +D  G  +      F       
Sbjct: 656  TVPSYSSKWQKPDYGWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPK 713

Query: 328  MVEALAFKEALSWIK*ANMGNFYIETDCQTLITALKSHSQNFSYFSSIVMECVDGLEAIS 149
            +VEAL  +E LSWI   +     +ETDC  ++ A++  S   + F  I+++C+D L+ + 
Sbjct: 714  VVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLV 773

Query: 148  NASFGFVKRSANNAAHCLARVVCSLSDFGEWSQAPP 41
            +    + +RSAN+AAHCLA   CS +    W   PP
Sbjct: 774  DVQVVYARRSANSAAHCLANGACSFTSLHIWGYTPP 809


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538337|gb|EEF39944.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 483

 Score =  122 bits (305), Expect = 1e-25
 Identities = 81/269 (30%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
 Frame = -1

Query: 868  LISRRVEVSLICMVCNKEPESPVHTLLHCKFAMEVWAIFPGSLIRTHFMSLFDWSNNLET 689
            L+ R+V     C  C  +PE+ +H L+ C    + W         +   +L + + ++  
Sbjct: 214  LVMRKVTEDSSCPCCVSQPETIMHILVLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFE 273

Query: 688  NKLKEEMELVCVVGWYIWKNMNEVVWNNRWGKPDVVIRQAKESLTQWYKAQKTQLLVGSG 509
            +     +    V+ W +W NMN+VVWN +      V  +A   L QW KA+K       G
Sbjct: 274  HFDDSIVASFVVLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKARKLTDYHQLG 333

Query: 508  TGSSAEE-KWIKPTHGMLKCNVDASIFPDKGYSSFGFVIKDANGVCVKALNGAFRGIFAT 332
               +  +  W KP  G  K NVDAS   ++G S   FV++D  G+ +  +      I   
Sbjct: 334  RHFAGGDCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANP 393

Query: 331  MMVEALAFKEALSWIK*ANMGNFYIETDCQTLITALKSHSQNFSYFSSIVMECVDGLEAI 152
             + EA A KEALSWI    M    IETDC   I  L+      SY   ++ +C D L  +
Sbjct: 394  DVAEAWALKEALSWIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCLLKDCQDLLRVL 453

Query: 151  SNASFGFVKRSANNAAHCLARVVCSLSDF 65
            +  +  FV  SAN  AH +++  CS   F
Sbjct: 454  NRCNLVFVYGSANTVAHMISKATCSAHMF 482


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 393

 Score =  112 bits (281), Expect = 9e-23
 Identities = 84/308 (27%), Positives = 131/308 (42%), Gaps = 21/308 (6%)
 Frame = -1

Query: 871  RLISRRVEVSLICMVCNKEPESPVHTLLHCKFAMEVWAIFPGSLIRTHFMSLFDWSNNLE 692
            RLISR V     C+ C    E   H   HC+ A++VW       +    +S FD + ++ 
Sbjct: 85   RLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFDNAPDII 144

Query: 691  TNKLKE----EMELVCVVGWYIWKNMNEVVWNNRWGKPDVVIRQAKESLTQWYKAQKTQL 524
             N L++    +ME +  + W IWK+ N  +W         ++ +AK  L  W KA   Q 
Sbjct: 145  FNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRKANHKQG 204

Query: 523  LVG---SGTGSSAEE-------------KWIKPTHGMLKCNVDASIFPDKGYSSFGFVIK 392
            L+G   S T S  +              +W KP  G LKCNVDAS          G  I+
Sbjct: 205  LLGQVHSPTNSRPQTHDSQNTDNRYGNIRWRKPKSGRLKCNVDASFSTSSNKVGIGMCIR 264

Query: 391  DANGVCVKALNGAFRGIFATMMVEALAFKEALSWIK*ANMGNFYIETDCQTLITALKSHS 212
            D+ G  V++    F  +    + EAL    A  WI    + N   E D +T+        
Sbjct: 265  DSEGNHVRSKTMWFSPLCPVNIGEALGLYHATRWINELQLTNVDFEVDSKTIADYFNKAR 324

Query: 211  QNFSYFSSIVMECVDGLEA-ISNASFGFVKRSANNAAHCLARVVCSLSDFGEWSQAPPFL 35
             + + F SI+   +      ++N+   F +R AN  AH LA+       F  + ++P  +
Sbjct: 325  GDNTEFGSIMENTIQFCNIFLTNSHVEFTRRQANEVAHELAKAATLGPSFHIFDESPTCI 384

Query: 34   SSVLAVDM 11
            S ++  +M
Sbjct: 385  SDLIFNEM 392


>ref|XP_003605496.1| hypothetical protein MTR_4g032310 [Medicago truncatula]
           gi|355506551|gb|AES87693.1| hypothetical protein
           MTR_4g032310 [Medicago truncatula]
          Length = 283

 Score =  112 bits (281), Expect = 9e-23
 Identities = 79/282 (28%), Positives = 124/282 (43%), Gaps = 13/282 (4%)
 Frame = -1

Query: 829 VCNKEPESPVHTLLHCKFAMEVWAIFPGSLIRTHFMSLFDWSNNLETNKL--------KE 674
           +C +  E   H L  C  A +VW     SL+ +   S+  W NN     +         +
Sbjct: 1   MCEESYEDASHVLFDCPRARKVWQ---DSLLLSKVNSVM-WCNNTAAEFIFALLQELSHD 56

Query: 673 EMELVCVVGWYIWKNMNEVVWNNRWGKPDVVIRQAKESLTQWYKAQKTQLLVGSGTGSSA 494
           + EL   V W +WK+ N  +W N       ++  AK+ L  W  A +   +  + T +S 
Sbjct: 57  QAELFASVLWSLWKSRNLRLWQNVRETSQAILECAKQILANWRTANRNTAVQQTETATSR 116

Query: 493 EEK----WIKPTHGMLKCNVDASIFPDKGYSSFGFVIKDANGVCVKALNGAFRGIFATMM 326
            +     W KP H  LKCNVD S         FGF I++  G  +KA       +FA+ +
Sbjct: 117 AQAVQSFWQKPAHCRLKCNVDVSFSEALNCVGFGFCIRNEFGNLIKAKTMWSNPVFASDV 176

Query: 325 VEALAFKEALSWIK*ANMGNFYIETDCQTLITALKSHSQNFSYFSSIVMECVDGLE-AIS 149
            EAL    A+ W+    + N   E D + ++    + S + S F SIV EC        +
Sbjct: 177 GEALGLSNAIRWVHELQLLNINFELDAKKVVDYFNNGSNDISEFGSIVEECRRSHNFYFA 236

Query: 148 NASFGFVKRSANNAAHCLARVVCSLSDFGEWSQAPPFLSSVL 23
           N+   F +R AN  AH LA+   SL+    ++  P  +S+++
Sbjct: 237 NSKVEFSRRQANEVAHTLAQEATSLASPHNFNDVPFCISNLI 278


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  110 bits (275), Expect = 4e-22
 Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
 Frame = -1

Query: 871  RLISRRVEVSLICMVCNKEPESPVHTLLHCKFAMEVWAIFPGSLIRTHFMSLFDWSNNLE 692
            RL S+ V+    C VC+   E   H    C  +M  W       + +  M++FD + +  
Sbjct: 395  RLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQRIG---LWSPLMAVFDINVSFP 451

Query: 691  TNKL-------KEEMELVCVVGWYIWKNMNEVVWNNRWGKPDVVIRQAKESLTQWYKAQK 533
            TN         +++ ++  V  W IWK+ N  VWNN       +  +A   LT W  AQ 
Sbjct: 452  TNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVWNNITDTAQDICARAGSLLTSWRNAQN 511

Query: 532  TQLLVGSGTGSSAEEKWIKPTHGMLKCNVDASIFPDKGYSSFGFVIKDANGVCVKALNGA 353
             +        +  + KW+KP+ G   CNVDAS    +     G  I+D  G  V A    
Sbjct: 512  IRHPSPQNPSTPNDLKWVKPSPGRFTCNVDASFSQARNRVGIGVCIRDEEGRFVLAKTEW 571

Query: 352  FRGIFATMMVEALAFKEALSWIK*ANMGNFYIETDCQTLITALKSHSQNFSYFSSIVMEC 173
               +    + EAL    A+ W++   +G    E D ++++ +L   +   S FS+++ EC
Sbjct: 572  MTPLLDVELGEALGLLSAMHWVRDLQLGIVDFELDSKSVVDSLYGSTSGVSNFSAVINEC 631

Query: 172  VDGLEA-ISNASFGFVKRSANNAAHCLARV 86
               L + +  +   F++R AN  AH  ARV
Sbjct: 632  RRLLASDLVTSDVRFIRRQANEVAHSFARV 661


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