BLASTX nr result

ID: Cnidium21_contig00018598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018598
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529751.1| conserved hypothetical protein [Ricinus comm...   163   8e-38
ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vit...   158   2e-36
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...   156   8e-36
ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...   156   8e-36
ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|2...   156   8e-36

>ref|XP_002529751.1| conserved hypothetical protein [Ricinus communis]
            gi|223530749|gb|EEF32617.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 314

 Score =  163 bits (412), Expect = 8e-38
 Identities = 77/107 (71%), Positives = 89/107 (83%)
 Frame = -2

Query: 1066 SNRCAVQGCKMKAMQLTQYCNMHILRDEKQMLYKGCGYVIKSSQAGPILCSKPILRAAVP 887
            +NRC   GCK+KAM LT +C++HIL D KQ LYK CGYVIKS+QAGPI C KPILR++ P
Sbjct: 184  NNRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSSAP 243

Query: 886  SLCTPHMQKAEKHVARALKKAGLSGHSTSKLAPQFHVIVAEYVNQIQ 746
            SLCT H QKA+KHV RALKKAGL+  S+SKLAP+FHVIVAEYV QIQ
Sbjct: 244  SLCTVHFQKAQKHVTRALKKAGLNVSSSSKLAPKFHVIVAEYVRQIQ 290


>ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 237

 Score =  158 bits (400), Expect = 2e-36
 Identities = 78/124 (62%), Positives = 90/124 (72%)
 Frame = -2

Query: 1060 RCAVQGCKMKAMQLTQYCNMHILRDEKQMLYKGCGYVIKSSQAGPILCSKPILRAAVPSL 881
            RCAV GCK KAM LT++C+ HIL D KQ LYKGC +VIKS QAGP+LC KPILR+ VPSL
Sbjct: 111  RCAVSGCKSKAMALTRFCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSL 170

Query: 880  CTPHMQKAEKHVARALKKAGLSGHSTSKLAPQFHVIVAEYVNQIQXXXXXXXXXXKEPCE 701
            C  H QKAE+ V  ALKKAGL+  S+SKLAP+FHVIVAEYV+QIQ              E
Sbjct: 171  CPIHFQKAERQVNNALKKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQRASVNKVE 230

Query: 700  VNEE 689
            + EE
Sbjct: 231  IKEE 234


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score =  156 bits (395), Expect = 8e-36
 Identities = 75/105 (71%), Positives = 86/105 (81%)
 Frame = -2

Query: 1060 RCAVQGCKMKAMQLTQYCNMHILRDEKQMLYKGCGYVIKSSQAGPILCSKPILRAAVPSL 881
            RCAV GCK KAM LT++C+ HIL D KQ LYKGC +VIKS QAGP+LC KPILR+ VPSL
Sbjct: 111  RCAVSGCKSKAMALTRFCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSL 170

Query: 880  CTPHMQKAEKHVARALKKAGLSGHSTSKLAPQFHVIVAEYVNQIQ 746
            C  H QKAE+ V  ALKKAGL+  S+SKLAP+FHVIVAEYV+QIQ
Sbjct: 171  CPIHFQKAERQVNNALKKAGLNAASSSKLAPKFHVIVAEYVHQIQ 215


>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  156 bits (395), Expect = 8e-36
 Identities = 73/107 (68%), Positives = 88/107 (82%)
 Frame = -2

Query: 1066 SNRCAVQGCKMKAMQLTQYCNMHILRDEKQMLYKGCGYVIKSSQAGPILCSKPILRAAVP 887
            ++RC   GCK+KAM LT +C++HIL D KQ LYK CGYVIKS+QAGPI C KPILR+  P
Sbjct: 129  NHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAP 188

Query: 886  SLCTPHMQKAEKHVARALKKAGLSGHSTSKLAPQFHVIVAEYVNQIQ 746
            SLCT H+QKA+KHV +AL+KAGL+  S+SKLAP+FHVIV EYV QIQ
Sbjct: 189  SLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQ 235


>ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|222837262|gb|EEE75641.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  156 bits (395), Expect = 8e-36
 Identities = 73/107 (68%), Positives = 88/107 (82%)
 Frame = -2

Query: 1066 SNRCAVQGCKMKAMQLTQYCNMHILRDEKQMLYKGCGYVIKSSQAGPILCSKPILRAAVP 887
            ++RC   GCK+KAM LT +C++HIL D KQ LYK CGYVIKS+QAGPI C KPILR+  P
Sbjct: 159  NHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAP 218

Query: 886  SLCTPHMQKAEKHVARALKKAGLSGHSTSKLAPQFHVIVAEYVNQIQ 746
            SLCT H+QKA+KHV +AL+KAGL+  S+SKLAP+FHVIV EYV QIQ
Sbjct: 219  SLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQ 265


Top