BLASTX nr result

ID: Cnidium21_contig00018588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018588
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38834.3| unnamed protein product [Vitis vinifera]              219   8e-55
ref|XP_002321885.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52
ref|NP_001233826.1| TCP transcription factor 21 [Solanum lycoper...   209   9e-52
ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [V...   209   1e-51
ref|XP_003592339.1| TCP family transcription factor [Medicago tr...   204   5e-50

>emb|CBI38834.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  219 bits (559), Expect = 8e-55
 Identities = 127/255 (49%), Positives = 157/255 (61%), Gaps = 10/255 (3%)
 Frame = +3

Query: 330  PKQEPPENELGRSMIVPVQEKTVVAQTSRRVSKDRHTKVEGRGRRIRMPATCAARIFQLT 509
            P   P    +  +M +PVQ +       R  +KDRHTKVEGRGRRIRMPATCAARIFQLT
Sbjct: 88   PAAPPAMGVVPVAMPMPVQVRRPAPPVKRASTKDRHTKVEGRGRRIRMPATCAARIFQLT 147

Query: 510  RELGHKSDGETIRWLLERAEPEIIKATGTGTIPAIAVNVNGTLKIPTTSPAT----EGDA 677
            RELGHKSDGETIRWLLE AEP II ATGTGT+PAIA++V GTLKIPTTS AT    + + 
Sbjct: 148  RELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLKIPTTSTATTQEPDPNK 207

Query: 678  KKRKRPCNSDFIDIXXXXXXXXXXXXXFAPVA-PIMPAMWGPTGVVGSNXXXXXXXXXXX 854
            KKRKRP NS+F+D+              AP+A P+ P    P   + SN           
Sbjct: 208  KKRKRPANSEFVDV----NDAVSVSSGLAPIATPLAPQGLVPMWAIPSNAVGAFWMVPPT 263

Query: 855  XXXXXXMNQGHLWAFPAGATPVFNVTGRPVSDYV-SMQPVAMMAD--SGSCSTMAG--SM 1019
                   NQ  +W FP  ATP+ N++ RP+S +V SM P   +A   + + STM    S+
Sbjct: 264  TAIAGPSNQPQIWTFPPTATPLINISARPISSFVSSMHPTINVASATASAASTMLRDFSL 323

Query: 1020 DVYDKRELQFMAGCS 1064
            ++YDK+ELQFM+  S
Sbjct: 324  EIYDKQELQFMSRSS 338


>ref|XP_002321885.1| predicted protein [Populus trichocarpa] gi|222868881|gb|EEF06012.1|
            predicted protein [Populus trichocarpa]
          Length = 231

 Score =  211 bits (537), Expect = 3e-52
 Identities = 125/235 (53%), Positives = 146/235 (62%), Gaps = 22/235 (9%)
 Frame = +3

Query: 414  RRVSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLERAEPEIIKATG 593
            +R +KDRHTKVEGRGRR+RMPATCAARIFQLTRELGHKSDGETIRWLLE AEP II ATG
Sbjct: 3    KRNTKDRHTKVEGRGRRVRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATG 62

Query: 594  TGTIPAIAVNVNGTLKIPTTSPAT---EGDA------KKRKRPCNSDFIDIXXXXXXXXX 746
            TGT+PAIAV+VNGTLKIPT SPAT   + DA      KKRKRPCNSDF+D+         
Sbjct: 63   TGTVPAIAVSVNGTLKIPTESPATAAADSDADGLVHKKKRKRPCNSDFVDLTEAAHQNSV 122

Query: 747  XXXXFAPVAPIMPAMWGPTGVVGSNXXXXXXXXXXXXXXXXXMNQGHLWAFPA-GATPVF 923
                 + +API  A   P G+V                     NQ   WAFPA   TP F
Sbjct: 123  S----SGLAPI--ASTSPQGLVPLWPMGTFMFPQGSSVGVGGSNQAQFWAFPATSTTPFF 176

Query: 924  NVTGRPVSDYVS-MQPVAMMADSGSCSTMAG-----------SMDVYDKRELQFM 1052
            N+  RP+S +VS MQP   +A S +     G           S+++YDK+ELQF+
Sbjct: 177  NMAARPISSFVSAMQPGVQLAGSSTGGGGGGGGGGAQMLRDFSLEIYDKKELQFL 231


>ref|NP_001233826.1| TCP transcription factor 21 [Solanum lycopersicum]
            gi|306416853|gb|ADM87270.1| TCP transcription factor 21
            [Solanum lycopersicum]
          Length = 326

 Score =  209 bits (533), Expect = 9e-52
 Identities = 141/320 (44%), Positives = 168/320 (52%), Gaps = 39/320 (12%)
 Frame = +3

Query: 258  DPLLGDPTLYTISAVDGVGSM-------------VTVPKQEPPENEL--GRSMIVPVQEK 392
            DPLLGD   YTI+AV  V                V + K+EP EN+L    S+ + +Q +
Sbjct: 23   DPLLGDSHEYTIAAVGNVTDAEGVDPSPAASTDRVLLLKEEPEENDLRVSTSVGMNMQLQ 82

Query: 393  TVVAQTSRRVSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLERAEP 572
             V  Q  +R SKDRHTKVEGRGRRIRMPA CAARIFQLTRELGHKS+GETIRWLLERAEP
Sbjct: 83   KVEKQPVKRSSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSEGETIRWLLERAEP 142

Query: 573  EIIKATGTGTIPAIAVNVNGTLKIPTTSPATEGDAKKRKRPCNSDFIDIXXXXXXXXXXX 752
             II ATGTGT+PAIAV+VNGTLKIPT++   E   K+RKR  NS+F +            
Sbjct: 143  AIIAATGTGTVPAIAVSVNGTLKIPTSNNEGESSRKRRKRAANSEFYE-----------A 191

Query: 753  XXFAPVAPIMPAMWGPTGVVGSNXXXXXXXXXXXXXXXXXMNQG----------HLWAFP 902
              FAPVAPI P    P   VGS                  +  G           LW   
Sbjct: 192  SNFAPVAPIAPQGLVPVWPVGSGNGLIPTTAFTGGATFYMLPPGTNTTVAATGAQLW--- 248

Query: 903  AGATPVFNV-----------TGRPVSDYVSMQPVAMMADSGSCSTMA---GSMDVYDKRE 1040
              ATP+ NV             +  ++   +  VA      S ST      S+++YDKRE
Sbjct: 249  --ATPILNVPYAATGVSAACVSKSDNNGGKLSTVASAMPPSSSSTQMLRDFSLEIYDKRE 306

Query: 1041 LQFMAGCSTSSADDNKQPSS 1100
            LQFM G  +S  D      S
Sbjct: 307  LQFMVGSGSSEIDQTSSSKS 326


>ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
          Length = 360

 Score =  209 bits (531), Expect = 1e-51
 Identities = 129/288 (44%), Positives = 158/288 (54%), Gaps = 43/288 (14%)
 Frame = +3

Query: 330  PKQEPPENELGRSMIVPVQEKTVVAQTSRRVSKDRHTKVEGRGRRIRMPATCAARIFQLT 509
            P   P    +  +M +PVQ +       R  +KDRHTKVEGRGRRIRMPATCAARIFQLT
Sbjct: 75   PAAPPAMGVVPVAMPMPVQVRRPAPPVKRASTKDRHTKVEGRGRRIRMPATCAARIFQLT 134

Query: 510  RELGHKSDGETIRWLLERAEPEIIKATGTGTIPAIAVNVNGTLKIPTTSPAT----EGDA 677
            RELGHKSDGETIRWLLE AEP II ATGTGT+PAIA++V GTLKIPTTS AT    + + 
Sbjct: 135  RELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLKIPTTSTATTQEPDPNK 194

Query: 678  KKRKRPCNSDFIDIXXXXXXXXXXXXXFAPVA-PIMPAMWGPTGVVGSNXXXXXXXXXXX 854
            KKRKRP NS+F+D+              AP+A P+ P    P   + SN           
Sbjct: 195  KKRKRPANSEFVDV----NDAVSVSSGLAPIATPLAPQGLVPMWAIPSNAVGAFWMVPPT 250

Query: 855  XXXXXXMNQGHLWAFPAGATPVFNVTGRPVSDYV-SMQPVAMMAD-------------SG 992
                   NQ  +W FP  ATP+ N++ RP+S +V SM P   +A              S 
Sbjct: 251  TAIAGPSNQPQIWTFPPTATPLINISARPISSFVSSMHPTINVASATASAASTVGVKASK 310

Query: 993  SCSTMAG------------------------SMDVYDKRELQFMAGCS 1064
            + STMA                         S+++YDK+ELQFM+  S
Sbjct: 311  ASSTMAPSSTSTATTTTTTTSTTTTQMLRDFSLEIYDKQELQFMSRSS 358


>ref|XP_003592339.1| TCP family transcription factor [Medicago truncatula]
            gi|355481387|gb|AES62590.1| TCP family transcription
            factor [Medicago truncatula]
          Length = 367

 Score =  204 bits (518), Expect = 5e-50
 Identities = 137/316 (43%), Positives = 166/316 (52%), Gaps = 59/316 (18%)
 Frame = +3

Query: 333  KQEPPENELGRSMIVPVQEKTVVAQTSRRVSKDRHTKVEGRGRRIRMPATCAARIFQLTR 512
            K+E  E E    + VPVQ  TV A  ++R SKDRHTKVEGRGRRIR+PATCAARIFQLTR
Sbjct: 66   KEELTETENNSLIPVPVQTMTVAA--AKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTR 123

Query: 513  ELGHKSDGETIRWLLERAEPEIIKATGTGTIPAIAVNVNGTLKIPTTSPA----TEGDAK 680
            ELGHKSDGETIRWLLE+AEP II+ATGTGT+PAIAV+V GTLKIPT+SPA     +   K
Sbjct: 124  ELGHKSDGETIRWLLEQAEPSIIEATGTGTVPAIAVSVGGTLKIPTSSPARPDGEDAPVK 183

Query: 681  KRKRPCNSDFIDIXXXXXXXXXXXXXFAPVAPIMPAMWGPTG------------------ 806
            +R+R  NS+F+D+              + +API    +G                     
Sbjct: 184  RRRRASNSEFVDLNDQVSMC-------SGLAPIAQTAYGAAATSSGGGSGENGGGLVPLW 236

Query: 807  -VVGSNXXXXXXXXXXXXXXXXXMNQGHLWAFPAGATPVFNVTGRPVSDYVS-------- 959
             VV +                  MNQ   WA P  A P FNV  RP+SD+VS        
Sbjct: 237  PVVSNGVGSNTTGPFFMFPNSTLMNQPQFWAIP--AAPFFNVQTRPISDFVSAMQMPQEP 294

Query: 960  ---------------MQPVAMMADSGSCSTMAG-------------SMDVYDKRELQFMA 1055
                           + P    A S SCS                 S+D++DK+ELQFM 
Sbjct: 295  SNAATAYANSNASSTLAPSLSSATSTSCSATTSSSSATNTQMLRDFSLDIFDKKELQFM- 353

Query: 1056 GCSTSSADDNKQPSSD 1103
            GC  SSA+    PSS+
Sbjct: 354  GC--SSANLESSPSSN 367


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