BLASTX nr result

ID: Cnidium21_contig00018575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018575
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   134   6e-30
emb|CBI30994.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   130   1e-28
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   129   3e-28
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   128   4e-28

>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
           gi|223537608|gb|EEF39232.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 702

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/72 (90%), Positives = 69/72 (95%)
 Frame = -1

Query: 218 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 39
           NLPNGQ +QA+R+AIPLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 248 NLPNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 307

Query: 38  VENVILIFSVNR 3
            ENVILIFSVNR
Sbjct: 308 AENVILIFSVNR 319


>emb|CBI30994.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/72 (87%), Positives = 68/72 (94%)
 Frame = -1

Query: 218 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 39
           NLPNG  +QA+++A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 153 NLPNGLPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 212

Query: 38  VENVILIFSVNR 3
           VENVILIFSVNR
Sbjct: 213 VENVILIFSVNR 224


>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/72 (87%), Positives = 68/72 (94%)
 Frame = -1

Query: 218 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 39
           NLPNG  +QA+++A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 226 NLPNGLPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 285

Query: 38  VENVILIFSVNR 3
           VENVILIFSVNR
Sbjct: 286 VENVILIFSVNR 297


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 681

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = -1

Query: 218 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 39
           N+ NGQ +QA+R+A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 238 NVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDS 297

Query: 38  VENVILIFSVNR 3
           VENVILIFSVNR
Sbjct: 298 VENVILIFSVNR 309


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 691

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/72 (84%), Positives = 68/72 (94%)
 Frame = -1

Query: 218 NLPNGQQSQASRSAIPLPQGISRYFVVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 39
           N+ NGQ +QA+R+A PLPQGISRYF+VKSCNREN ELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 238 NVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDS 297

Query: 38  VENVILIFSVNR 3
           VENVIL+FSVNR
Sbjct: 298 VENVILVFSVNR 309


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