BLASTX nr result

ID: Cnidium21_contig00018568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018568
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245...    73   1e-10
emb|CBI19274.3| unnamed protein product [Vitis vinifera]               73   1e-10
emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]    73   1e-10
ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08
ref|XP_002514048.1| DNA binding protein, putative [Ricinus commu...    64   6e-08

>ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245507 [Vitis vinifera]
          Length = 606

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 33/174 (18%)
 Frame = +2

Query: 2   GARIASPSDAASLLRAAQAKNAVRIMPGGASMIKASGVASSGNSLPS-------NVHFIR 160
           GARIA+PS AASLL+ AQ++NAV IMPGG+++IK+S VA   N LP+       NVH+  
Sbjct: 343 GARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSS-VAGGANPLPANHLGAHPNVHYKC 401

Query: 161 TGLATT-FPTYSTTPPNATRSTSSQHFQGHSMKQTIVQGIQRQTSP---KLNAASETMKA 328
            G  TT   TYS   P+ +R+ S+         +    G Q   SP    +N +SE   A
Sbjct: 402 AGPPTTSLSTYSAVAPSVSRTGSA---------KPAAPGGQLAPSPSATSVNISSEQTNA 452

Query: 329 ATSGL---------------------GNV-ETNILEDMMPRSVDALKEFSQDDE 424
           AT+ L                     GNV +  +LED    S +   E  Q+D+
Sbjct: 453 ATTSLAVEYPAKQETKTSEETKVPISGNVPKAKVLEDQACVSSNTASEQVQEDQ 506


>emb|CBI19274.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 33/174 (18%)
 Frame = +2

Query: 2   GARIASPSDAASLLRAAQAKNAVRIMPGGASMIKASGVASSGNSLPS-------NVHFIR 160
           GARIA+PS AASLL+ AQ++NAV IMPGG+++IK+S VA   N LP+       NVH+  
Sbjct: 372 GARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSS-VAGGANPLPANHLGAHPNVHYKC 430

Query: 161 TGLATT-FPTYSTTPPNATRSTSSQHFQGHSMKQTIVQGIQRQTSP---KLNAASETMKA 328
            G  TT   TYS   P+ +R+ S+         +    G Q   SP    +N +SE   A
Sbjct: 431 AGPPTTSLSTYSAVAPSVSRTGSA---------KPAAPGGQLAPSPSATSVNISSEQTNA 481

Query: 329 ATSGL---------------------GNV-ETNILEDMMPRSVDALKEFSQDDE 424
           AT+ L                     GNV +  +LED    S +   E  Q+D+
Sbjct: 482 ATTSLAVEYPAKQETKTSEETKVPISGNVPKAKVLEDQACVSSNTASEQVQEDQ 535


>emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]
          Length = 598

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 33/174 (18%)
 Frame = +2

Query: 2   GARIASPSDAASLLRAAQAKNAVRIMPGGASMIKASGVASSGNSLPS-------NVHFIR 160
           GARIA+PS AASLL+ AQ++NAV IMPGG+++IK+S VA   N LP+       NVH+  
Sbjct: 335 GARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSS-VAGGANPLPANHLGAHPNVHYKC 393

Query: 161 TGLATT-FPTYSTTPPNATRSTSSQHFQGHSMKQTIVQGIQRQTSP---KLNAASETMKA 328
            G  TT   TYS   P+ +R+ S+         +    G Q   SP    +N +SE   A
Sbjct: 394 AGPPTTSLSTYSAVAPSVSRTGSA---------KPAAPGGQLAPSPSATSVNISSEQTNA 444

Query: 329 ATSGL---------------------GNV-ETNILEDMMPRSVDALKEFSQDDE 424
           AT+ L                     GNV +  +LED    S +   E  Q+D+
Sbjct: 445 ATTSLAVEYPAKQETKTSEETKVPISGNVPKAKVLEDQACVSSNTASEQVQEDQ 498


>ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|222844072|gb|EEE81619.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 53/145 (36%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
 Frame = +2

Query: 2   GARIASPSDAASLLRAAQAKNAVRIMPGGASMIKAS--GVASSGNSLPSNVHFIRTGLAT 175
           GARIA+ SDAASLL+AAQAKNAV IMP G+S IK+S  G  S+   +  N  FI +G+AT
Sbjct: 375 GARIATQSDAASLLKAAQAKNAVHIMPTGSSSIKSSMTGGISTHLDVNPNTRFISSGMAT 434

Query: 176 TFPT-------------YSTTPPNATRSTSSQHFQGHSMKQTIVQGIQRQTSPKLNAAS- 313
              T              +T+PP   +++SS      S   T       QT+  L  A+ 
Sbjct: 435 APTTTRPPASGPCPGLPKATSPPPQMKASSSTAQHTQSTPVTSFNAQSEQTNSVLAKATV 494

Query: 314 --ETMKAATSGLGNVETNILEDMMP 382
               MKA++    N  +  +    P
Sbjct: 495 LPPQMKASSMTTQNTLSTPITSSTP 519


>ref|XP_002514048.1| DNA binding protein, putative [Ricinus communis]
           gi|223547134|gb|EEF48631.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 608

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   GARIASPSDAASLLRAAQAKNAVRIMPGGASMIKAS--GVASSGNSLPSNVHF--IRTGL 169
           GARIA+ SDAASLL+AAQAKNAV IMP G S +K++  G AS+ +    NVH   +  G 
Sbjct: 353 GARIATQSDAASLLKAAQAKNAVHIMPTGGSSMKSALPGGASNHSEAHPNVHTNDLAAGS 412

Query: 170 ATTFPTYSTTPPNATRSTSSQHFQGHSMKQTIVQGIQRQTSPKLNAASETMKA 328
            +T P  S +      S++ QH    S+  T      +Q + +L A  +T  A
Sbjct: 413 RSTLPVVSPSAIRPAASSTVQHIP--SISDTAKNISAKQFNAELPARKDTETA 463


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