BLASTX nr result

ID: Cnidium21_contig00018562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018562
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001426891.1| hypothetical protein ATCV1_z410R [Acanthocys...    60   4e-07
ref|ZP_13696885.1| putative membrane protein [Escherichia coli D...    59   6e-07
gb|AGE49177.1| hypothetical protein ATCVBr0604L_477R [Acanthocys...    58   2e-06
ref|ZP_08175293.1| hypothetical protein HMPREF0523_1106 [Lactoba...    57   2e-06

>ref|YP_001426891.1| hypothetical protein ATCV1_z410R [Acanthocystis turfacea Chlorella
           virus 1] gi|155124677|gb|ABT16544.1| hypothetical
           protein ATCV1_z410R [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 129

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +3

Query: 90  WYWIWVWCGLWIWCWMGFWRHAYEYPWSGCRWRVWSWARPWMGIWHWIW 236
           W W+  W G W+ C  GFW   +   W GC    W W RPW   WH  W
Sbjct: 16  WTWLGCWYGFWLGCRRGFWLGCWRGFWLGCWRGFWLWGRPWFWSWHRSW 64


>ref|ZP_13696885.1| putative membrane protein [Escherichia coli DEC6C]
           gi|378003881|gb|EHV66921.1| putative membrane protein
           [Escherichia coli DEC6C]
          Length = 70

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 90  WYWIWVWCGLWIWCWMGFWRHAYEYPWSGCRWRVWSWARPWMGIWHWIW 236
           W W+W+W  LW+W W+  W   + + W      +W W   W+ +W W+W
Sbjct: 11  WLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLW 59



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 90  WYWIWVWCGLWIWCWMGFWRHAYEYPWSGCRWRVWSWARPWMGIWHWIW 236
           W W+W+W  LW+W W+  W   + + W      +W W   W+ +W W+W
Sbjct: 13  WLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLW 61



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 90  WYWIWVWCGLWIWCWMGFWRHAYEYPWSGCRWRVWSWARPWMGIWHWIW 236
           W W+W+W  LW+W W+  W   + + W      +W W   W+ +W W+W
Sbjct: 15  WLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLWLW 63


>gb|AGE49177.1| hypothetical protein ATCVBr0604L_477R [Acanthocystis turfacea
           Chlorella virus Br0604L]
          Length = 132

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 16/74 (21%)
 Frame = +3

Query: 57  CRNGAHKLPGDWYWI--WVW------CGLWIWC----WMGFWRHAYEYPWSGC-RWR-VW 194
           CR G+    G W+W   W W      CG W WC    W G W     + W G   WR  W
Sbjct: 50  CRRGSWHWCGSWHWCGSWYWRGPLHWCGPWHWCGSRHWRGSWHWRGSWHWRGSWHWRGPW 109

Query: 195 SWARP--WMGIWHW 230
            W  P  W G WHW
Sbjct: 110 HWRGPRHWRGSWHW 123


>ref|ZP_08175293.1| hypothetical protein HMPREF0523_1106 [Lactobacillus iners UPII
           60-B] gi|325477781|gb|EGC80917.1| hypothetical protein
           HMPREF0523_1106 [Lactobacillus iners UPII 60-B]
          Length = 156

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 90  WYWIWVWCGLWIWCWMGFWRHAYEYPWSGCRWRVWSWARPWMGIWHWIW 236
           W W+W W   W W W+  W   + + W      +W W R W  +W W+W
Sbjct: 59  WLWLWFWFRFWFWLWLWLWLWLWLWFWFRLWLWLWLWFRLWFRLWLWLW 107



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 90  WYWIWVWCGLWIWCWMGFWRHAYEYPWSGCRWRVWSWARPWMGIWHWIW 236
           W+W+W+W  LW+W W+ FW   + + W   R     W R W+ +W W+W
Sbjct: 69  WFWLWLW--LWLWLWLWFWFRLWLWLWLWFR----LWFRLWLWLWLWLW 111


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