BLASTX nr result

ID: Cnidium21_contig00018519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018519
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isofo...    98   8e-19
ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isofo...    98   8e-19
ref|XP_002509727.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
ref|XP_002318821.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002873304.1| rhomboid family protein [Arabidopsis lyrata ...    92   4e-17

>ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
          Length = 281

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = -1

Query: 410 YQYALWLVSLFLLIAGFTVGLVMLFRGVNGNDHCDWCRYLDCISTSKWKCD 258
           YQYA WLV++ LLI GFTVGLVMLFRG NGNDHC WC YL C+ TSKWKCD
Sbjct: 230 YQYAFWLVAMALLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCD 280


>ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
           gi|297742575|emb|CBI34724.3| unnamed protein product
           [Vitis vinifera]
          Length = 328

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = -1

Query: 410 YQYALWLVSLFLLIAGFTVGLVMLFRGVNGNDHCDWCRYLDCISTSKWKCD 258
           YQYA WLV++ LLI GFTVGLVMLFRG NGNDHC WC YL C+ TSKWKCD
Sbjct: 277 YQYAFWLVAMALLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCD 327


>ref|XP_002509727.1| conserved hypothetical protein [Ricinus communis]
           gi|223549626|gb|EEF51114.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 297

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -1

Query: 410 YQYALWLVSLFLLIAGFTVGLVMLFRGVNGNDHCDWCRYLDCISTSKWKCD 258
           YQYA  L+++ LL+AGFTVGLVMLFRGVNGNDHC WC YL C+ TSKWKCD
Sbjct: 246 YQYAFLLIAVVLLVAGFTVGLVMLFRGVNGNDHCSWCHYLSCVPTSKWKCD 296


>ref|XP_002318821.1| predicted protein [Populus trichocarpa] gi|222859494|gb|EEE97041.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 39/51 (76%), Positives = 43/51 (84%)
 Frame = -1

Query: 410 YQYALWLVSLFLLIAGFTVGLVMLFRGVNGNDHCDWCRYLDCISTSKWKCD 258
           YQYALWLVS+ LLI GFTV LVMLF+G NGNDHC WC YL C+ TS+WKCD
Sbjct: 248 YQYALWLVSVALLIVGFTVALVMLFKGKNGNDHCHWCHYLSCVPTSRWKCD 298


>ref|XP_002873304.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319141|gb|EFH49563.1| rhomboid family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/51 (74%), Positives = 42/51 (82%)
 Frame = -1

Query: 410 YQYALWLVSLFLLIAGFTVGLVMLFRGVNGNDHCDWCRYLDCISTSKWKCD 258
           YQY LWL+SL LLIAGF V L+MLFRG NGNDHC WCRYL C+ TS W+CD
Sbjct: 294 YQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCRYLRCVPTSSWRCD 344


Top