BLASTX nr result

ID: Cnidium21_contig00018505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018505
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514298.1| short-chain dehydrogenase, putative [Ricinus...   444   e-122
ref|XP_002324420.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_004162801.1| PREDICTED: probable chlorophyll(ide) b reduc...   438   e-120
ref|XP_002280953.1| PREDICTED: probable chlorophyll(ide) b reduc...   438   e-120
ref|XP_002863155.1| short-chain dehydrogenase/reductase family p...   437   e-120

>ref|XP_002514298.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223546754|gb|EEF48252.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 517

 Score =  444 bits (1141), Expect = e-122
 Identities = 220/282 (78%), Positives = 246/282 (87%)
 Frame = +2

Query: 2    LKECLESADDFSKRSLKYAEVVGVACDVSDPKDVKKLSDFAVNEFGSVDIWINNAGTNKG 181
            LKE + +    S+ +L +A+VVG+AC+V +P DV+KL++FAV EFGS+DIWINNAGTNKG
Sbjct: 231  LKEGMVTTSGTSRTNLAHAKVVGIACNVCEPSDVQKLANFAVKEFGSIDIWINNAGTNKG 290

Query: 182  FRPLLQFSDEDIQQIVSTNLVGSIICTREAMRVMGEQHKGGHIFNMDGAGSGGSSTPLTA 361
            FRPLLQFSDEDI QIVSTNLVGSI+CTREAMRV+  Q KGGHIFNMDGAGSGGSSTPLTA
Sbjct: 291  FRPLLQFSDEDINQIVSTNLVGSILCTREAMRVIMNQPKGGHIFNMDGAGSGGSSTPLTA 350

Query: 362  VYGATKCGXXXXXXXXXXXXXXXXVGVHTASPGMVLTDLLLSGSTVQNKQMFNIICELPE 541
            VYG+TKCG                VGVHTASPGMVLTDLLLSGST++NKQMFNIICELPE
Sbjct: 351  VYGSTKCGLRQLQASLFKECKRSKVGVHTASPGMVLTDLLLSGSTLKNKQMFNIICELPE 410

Query: 542  TVARTLVPRMRVVKGNGKAINYLTPPRILVALVTAWVRRGRWFDDKGRALYASEADRLRN 721
            TVARTLVPRMRVVKG+GKAINYLTPPRIL+ALVTAW+R+GRWFDD+GRALYA+EADRLRN
Sbjct: 411  TVARTLVPRMRVVKGSGKAINYLTPPRILLALVTAWLRQGRWFDDQGRALYAAEADRLRN 470

Query: 722  WAESRTRLSITDAMESYTEDTWVSVFSLSVVCAFIILSSTLN 847
            WAE+R R S TDAME YTE+TWVSVFSLSVVCAFIILSST N
Sbjct: 471  WAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTSN 512


>ref|XP_002324420.1| predicted protein [Populus trichocarpa] gi|222865854|gb|EEF02985.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  439 bits (1129), Expect = e-121
 Identities = 218/280 (77%), Positives = 247/280 (88%)
 Frame = +2

Query: 2   LKECLESADDFSKRSLKYAEVVGVACDVSDPKDVKKLSDFAVNEFGSVDIWINNAGTNKG 181
           LKE + +A +  + SL +A+VVG+ACDV +P DV+KL++FAVNEFGS+DIWINNAGTNKG
Sbjct: 152 LKEGMITASN--RTSLAHAKVVGIACDVCEPSDVQKLANFAVNEFGSIDIWINNAGTNKG 209

Query: 182 FRPLLQFSDEDIQQIVSTNLVGSIICTREAMRVMGEQHKGGHIFNMDGAGSGGSSTPLTA 361
           FRPLLQF+DEDI+QIVSTNLVGSI+CT+EAMR+M  Q KGGHIFNMDGAGSGGSSTPLTA
Sbjct: 210 FRPLLQFTDEDIKQIVSTNLVGSILCTQEAMRMMMNQPKGGHIFNMDGAGSGGSSTPLTA 269

Query: 362 VYGATKCGXXXXXXXXXXXXXXXXVGVHTASPGMVLTDLLLSGSTVQNKQMFNIICELPE 541
           VYG+TKCG                VG+HTASPGMVLTDLLLSGST++NKQMFNIICELPE
Sbjct: 270 VYGSTKCGLRQLQASLLKECKRSKVGIHTASPGMVLTDLLLSGSTLKNKQMFNIICELPE 329

Query: 542 TVARTLVPRMRVVKGNGKAINYLTPPRILVALVTAWVRRGRWFDDKGRALYASEADRLRN 721
           TVARTLVPRMRVVKG GKAI+YLTPPRIL+ALVTAW+RRGRWFDD+GRALYA+EADRLRN
Sbjct: 330 TVARTLVPRMRVVKGTGKAISYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRLRN 389

Query: 722 WAESRTRLSITDAMESYTEDTWVSVFSLSVVCAFIILSST 841
           WAE+R + S TDAME YTE+TWVSVFSLSVVCAFIILSST
Sbjct: 390 WAENRAQFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 429


>ref|XP_004162801.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1,
            chloroplastic-like [Cucumis sativus]
          Length = 521

 Score =  438 bits (1127), Expect = e-120
 Identities = 215/272 (79%), Positives = 239/272 (87%)
 Frame = +2

Query: 35   SKRSLKYAEVVGVACDVSDPKDVKKLSDFAVNEFGSVDIWINNAGTNKGFRPLLQFSDED 214
            S +SL +A+VVG  C+V DP+DV KL++F +NE GS+DIWINNAGTNKGFRPLLQF+DED
Sbjct: 246  SNKSLAHAKVVGTTCNVCDPEDVHKLANFTLNELGSIDIWINNAGTNKGFRPLLQFTDED 305

Query: 215  IQQIVSTNLVGSIICTREAMRVMGEQHKGGHIFNMDGAGSGGSSTPLTAVYGATKCGXXX 394
            I QI+STNLVGS++CTREAMRVM  Q KGGHIFNMDGAGSGGSSTPLTAVYG+TKCG   
Sbjct: 306  ITQILSTNLVGSLLCTREAMRVMRNQAKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 365

Query: 395  XXXXXXXXXXXXXVGVHTASPGMVLTDLLLSGSTVQNKQMFNIICELPETVARTLVPRMR 574
                         VGVHTASPGMVLTDLLLSGSTV+NKQMFNIICELPETVARTLVPRMR
Sbjct: 366  LQSSLLKECRRSNVGVHTASPGMVLTDLLLSGSTVRNKQMFNIICELPETVARTLVPRMR 425

Query: 575  VVKGNGKAINYLTPPRILVALVTAWVRRGRWFDDKGRALYASEADRLRNWAESRTRLSIT 754
            VVKG GKAINYLTPPRIL+ALVTAW+RRGRWFDD+GRALYA+EADR+RNWAE+RTR S T
Sbjct: 426  VVKGTGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRTRFSFT 485

Query: 755  DAMESYTEDTWVSVFSLSVVCAFIILSSTLNS 850
            DAME YTE+TWVSVFSLSVVCAFIILS+T N+
Sbjct: 486  DAMEMYTENTWVSVFSLSVVCAFIILSTTNNT 517


>ref|XP_002280953.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic
            [Vitis vinifera] gi|297738824|emb|CBI28069.3| unnamed
            protein product [Vitis vinifera]
          Length = 517

 Score =  438 bits (1127), Expect = e-120
 Identities = 216/283 (76%), Positives = 248/283 (87%)
 Frame = +2

Query: 2    LKECLESADDFSKRSLKYAEVVGVACDVSDPKDVKKLSDFAVNEFGSVDIWINNAGTNKG 181
            LKE + +A   SK +L+ A+VVG+ACDV +P DV+KL++FAV+EFGS++IWINNAGTNKG
Sbjct: 231  LKEGMVTAGGPSKTNLERAKVVGIACDVCEPDDVQKLANFAVSEFGSINIWINNAGTNKG 290

Query: 182  FRPLLQFSDEDIQQIVSTNLVGSIICTREAMRVMGEQHKGGHIFNMDGAGSGGSSTPLTA 361
            FRPLLQF+DEDI+QIVSTNLVGS++CT+EA+RVM  Q  GGHIFNMDGAGSGGSSTPLTA
Sbjct: 291  FRPLLQFTDEDIKQIVSTNLVGSLLCTQEAIRVMRSQGNGGHIFNMDGAGSGGSSTPLTA 350

Query: 362  VYGATKCGXXXXXXXXXXXXXXXXVGVHTASPGMVLTDLLLSGSTVQNKQMFNIICELPE 541
            VYG+TKCG                VGVHTASPGMVLTDLLLSGST+QNKQMFNIICELPE
Sbjct: 351  VYGSTKCGLRQLQGSLLKECKRSNVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE 410

Query: 542  TVARTLVPRMRVVKGNGKAINYLTPPRILVALVTAWVRRGRWFDDKGRALYASEADRLRN 721
            TVARTLVPRMRVVKG GKAINYLTPPRIL+AL+T W+R+GRWFD++GRALYA+EADR+RN
Sbjct: 411  TVARTLVPRMRVVKGTGKAINYLTPPRILLALITVWLRQGRWFDEQGRALYAAEADRIRN 470

Query: 722  WAESRTRLSITDAMESYTEDTWVSVFSLSVVCAFIILSSTLNS 850
            WAE+RTR S TDAME YTE+TWVSVFSLSVVCAFIILSST +S
Sbjct: 471  WAENRTRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSS 513


>ref|XP_002863155.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297308989|gb|EFH39414.1|
            short-chain dehydrogenase/reductase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 496

 Score =  437 bits (1124), Expect = e-120
 Identities = 212/283 (74%), Positives = 246/283 (86%)
 Frame = +2

Query: 2    LKECLESADDFSKRSLKYAEVVGVACDVSDPKDVKKLSDFAVNEFGSVDIWINNAGTNKG 181
            LKE + +A + +K+ L  A+VVG+ACDV  P+DV+KLS+FAV E GS++IWINNAGTNKG
Sbjct: 209  LKEIMSNASESAKKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKG 268

Query: 182  FRPLLQFSDEDIQQIVSTNLVGSIICTREAMRVMGEQHKGGHIFNMDGAGSGGSSTPLTA 361
            FRPLL+F++EDI QIVSTNL+GSI+CTR AM VM  QH GGHIFNMDGAGSGGSSTPLTA
Sbjct: 269  FRPLLEFTEEDITQIVSTNLIGSILCTRGAMDVMSRQHNGGHIFNMDGAGSGGSSTPLTA 328

Query: 362  VYGATKCGXXXXXXXXXXXXXXXXVGVHTASPGMVLTDLLLSGSTVQNKQMFNIICELPE 541
            VYG+TKCG                VG+HTASPGMVLT+LLLSGS+++NKQMFNIICELPE
Sbjct: 329  VYGSTKCGLRQFHGSIVKESQKTNVGLHTASPGMVLTELLLSGSSIKNKQMFNIICELPE 388

Query: 542  TVARTLVPRMRVVKGNGKAINYLTPPRILVALVTAWVRRGRWFDDKGRALYASEADRLRN 721
            TVARTLVPRMRVVKG+GKA+NYLTPPRIL+A+VT+W+RRGRWFDD+GRALYA+EADRLRN
Sbjct: 389  TVARTLVPRMRVVKGSGKAVNYLTPPRILLAIVTSWLRRGRWFDDQGRALYAAEADRLRN 448

Query: 722  WAESRTRLSITDAMESYTEDTWVSVFSLSVVCAFIILSSTLNS 850
            WAE+RTRLS+TDAME YTE+TWVSVFSLSVVCAFIIL ST  S
Sbjct: 449  WAENRTRLSLTDAMEMYTENTWVSVFSLSVVCAFIILQSTTPS 491


Top