BLASTX nr result

ID: Cnidium21_contig00018502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018502
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002509961.1| ring finger protein, putative [Ricinus commu...    77   1e-12
ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein A...    77   2e-12
ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein A...    75   7e-12

>ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|222845233|gb|EEE82780.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 30/38 (78%), Positives = 37/38 (97%)
 Frame = +3

Query: 3   DTIRTVPACNHYFHSNCIDEWLKLNATCPVCRNSPEGS 116
           DT+RT+P CNHYFH+NC+DEWLK+NATCP+CRNSP+GS
Sbjct: 322 DTLRTIPNCNHYFHANCVDEWLKMNATCPLCRNSPDGS 359


>ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|222841989|gb|EEE79536.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 30/38 (78%), Positives = 37/38 (97%)
 Frame = +3

Query: 3   DTIRTVPACNHYFHSNCIDEWLKLNATCPVCRNSPEGS 116
           DT+RT+P C+HYFH+NCIDEWLK+NATCP+CRNSP+GS
Sbjct: 327 DTLRTIPDCSHYFHANCIDEWLKMNATCPLCRNSPDGS 364


>ref|XP_002509961.1| ring finger protein, putative [Ricinus communis]
           gi|223549860|gb|EEF51348.1| ring finger protein,
           putative [Ricinus communis]
          Length = 392

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   DTIRTVPACNHYFHSNCIDEWLKLNATCPVCRNSPEGSLHRAATP 137
           +T+RT+P CNHYFH++CIDEWLK+NATCP+CRNSP+ S    ATP
Sbjct: 322 ETLRTIPECNHYFHADCIDEWLKMNATCPLCRNSPDVS--SVATP 364


>ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine
           max]
          Length = 582

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   DTIRTVPACNHYFHSNCIDEWLKLNATCPVCRNSPEGS 116
           +T+R++P CNHYFH++CIDEWL+LNATCP+CRNSPE S
Sbjct: 347 ETLRSIPECNHYFHADCIDEWLRLNATCPLCRNSPEAS 384


>ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
           sativus] gi|449505086|ref|XP_004162372.1| PREDICTED:
           putative RING-H2 finger protein ATL21A-like [Cucumis
           sativus]
          Length = 393

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +3

Query: 3   DTIRTVPACNHYFHSNCIDEWLKLNATCPVCRNSPEGS 116
           +TIRT+P C H+FH+NC+DEWLKLNATCPVCR SP+ S
Sbjct: 328 ETIRTIPDCGHFFHANCVDEWLKLNATCPVCRTSPDDS 365


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