BLASTX nr result

ID: Cnidium21_contig00018487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018487
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    62   5e-08
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...    60   2e-07
ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vi...    59   3e-07
emb|CBI23849.3| unnamed protein product [Vitis vinifera]               59   3e-07
emb|CBI31335.3| unnamed protein product [Vitis vinifera]               59   4e-07

>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
 Frame = +2

Query: 2    PDSVKNMEEIKVLHLS--CNVR-LCLPMIL-CFSSLERLTLTDEGQILSSAKPFSLSKLF 169
            P+ ++ M+ +KVL+    CN+  + +P  L C  SLE L L  +G  + S  P S++ L 
Sbjct: 721  PEEMRKMQSLKVLYADADCNLSDVAIPNDLRCLRSLESLDL--KGNPIYSI-PESINSLT 777

Query: 170  NLQSLTLDNCTSLGSSLPELPLNLQELRVYNHNSLEQLPNLSMLKELEQLHIRGC 334
             LQ L LD CT L  SLP+LP +L+EL+     SLE++ NL  L    Q+ + GC
Sbjct: 778  TLQYLCLDKCTRL-QSLPQLPTSLEELKAEGCTSLERITNLPNLLSTLQVELFGC 831


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
 Frame = +2

Query: 146  PFSLSKLFNLQSLTLDNCTSLGSSLPELPLNLQELRVYNHNSLEQLP-NLSMLKELEQLH 322
            P  L  L +LQ L + NC  L  S   LP +L+ LR+    +LE LP NL  L  LE L 
Sbjct: 983  PNGLENLSSLQELNISNCCKL-LSFKTLPQSLKNLRISACANLESLPTNLHELTNLEYLS 1041

Query: 323  IRGCISLRS--ISLLPSHLRSLLVKECTSLQD 412
            I+ C  L S  +S LPS LRSL + EC SL++
Sbjct: 1042 IQSCQKLASLPVSGLPSCLRSLSIMECASLEE 1073


>ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
 Frame = +2

Query: 143  KPFSLSKLFNLQSLTLDNCTSLGSSLPE--LPLNLQELRVYNHNSLEQLPNLSMLKELEQ 316
            +P  L  L++L+ L L  C  L  +LP     L+  E    + NS   +PNLS L  L++
Sbjct: 940  RPSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSRNSFITVPNLSRLPRLKR 999

Query: 317  LHIRGCISLRSISLLPSHLRSLLVKECTSLQ 409
            L +  C SLRS+  LPS++  LL  +CTSL+
Sbjct: 1000 LILEHCKSLRSLPELPSNIEKLLANDCTSLE 1030


>emb|CBI23849.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
 Frame = +2

Query: 143 KPFSLSKLFNLQSLTLDNCTSLGSSLPE--LPLNLQELRVYNHNSLEQLPNLSMLKELEQ 316
           +P  L  L++L+ L L  C  L  +LP     L+  E    + NS   +PNLS L  L++
Sbjct: 547 RPSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSRNSFITVPNLSRLPRLKR 606

Query: 317 LHIRGCISLRSISLLPSHLRSLLVKECTSLQ 409
           L +  C SLRS+  LPS++  LL  +CTSL+
Sbjct: 607 LILEHCKSLRSLPELPSNIEKLLANDCTSLE 637


>emb|CBI31335.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
 Frame = +2

Query: 8    SVKNMEEIKVLHLS-CNVR--LCLPMILCFSSLERLTLTDEGQILSSAKPFSLSKLFNLQ 178
            S  N+  +K L LS CN+     L  +   SSLE L L+    +       ++S L +L 
Sbjct: 797  SSSNLCYLKKLDLSDCNISDGANLGSLGFLSSLEDLNLSGNNFVTLP----NMSGLSHLV 852

Query: 179  SLTLDNCTSLGSSLPELPLNLQELRVYNHNSLEQLPNLSMLKELEQLHIRGCISLRSISL 358
             L L+NC  L  +LP+ P +L++L +   N+   LPN+S L  L+ L +  C  L ++  
Sbjct: 853  FLGLENCKRL-QALPQFPSSLEDL-ILRGNNFVTLPNMSGLSHLKTLVLGNCKRLEALPQ 910

Query: 359  LPSHLRSLLVKECTSL 406
            LPS +RSL   +CTSL
Sbjct: 911  LPSSIRSLNATDCTSL 926


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