BLASTX nr result

ID: Cnidium21_contig00018483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018483
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42086.1| unknown [Lotus japonicus]                               90   2e-16
ref|XP_003540489.1| PREDICTED: uroporphyrinogen decarboxylase 1,...    88   8e-16
ref|XP_004156545.1| PREDICTED: uroporphyrinogen decarboxylase 1,...    86   2e-15
ref|XP_004137238.1| PREDICTED: uroporphyrinogen decarboxylase 1,...    86   2e-15
gb|AFK37069.1| unknown [Medicago truncatula]                           86   2e-15

>gb|AFK42086.1| unknown [Lotus japonicus]
          Length = 407

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/85 (57%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
 Frame = +3

Query: 78  SSCNIGWKSSSTLFQELGLLSSSNNALFVSPKTK-----SFKVSASSSTADPLLVKAAKG 242
           +SC +GWKSSS LF      S+S     +SP  K     S   SA+SS++DPLLVKA +G
Sbjct: 6   NSCGLGWKSSS-LFAH----STSTGFNLISPSFKPKPKFSLTCSAASSSSDPLLVKATRG 60

Query: 243 EPVSRPPAWMMRQAGRYMSVYKKLA 317
           +P SRPPAWMMRQAGRYM+VY+KLA
Sbjct: 61  DPASRPPAWMMRQAGRYMAVYRKLA 85


>ref|XP_003540489.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Glycine max]
          Length = 410

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/96 (54%), Positives = 64/96 (66%), Gaps = 10/96 (10%)
 Frame = +3

Query: 60  MLTFVASSCNIGWKSSSTLFQELGLLSSSNNALFVS--------PKTKSFKV--SASSST 209
           M T + SS  +GWK SS   Q       SNN   V+        P++  F +  SA+SS+
Sbjct: 1   MATSINSSA-LGWKHSSLFVQ-------SNNGFNVASPPFKHKPPRSSKFSLTCSAASSS 52

Query: 210 ADPLLVKAAKGEPVSRPPAWMMRQAGRYMSVYKKLA 317
           +DPLLVKAA+G+PVSRPPAWMMRQAGRYM+VYKKLA
Sbjct: 53  SDPLLVKAARGDPVSRPPAWMMRQAGRYMAVYKKLA 88


>ref|XP_004156545.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Cucumis sativus]
          Length = 466

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/85 (56%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
 Frame = +3

Query: 75  ASSC-NIGWKSSSTLFQELGLLSSSNNALFVSPKT--KSFKVSASSSTADP-LLVKAAKG 242
           AS+C ++GW+SSS L Q     ++S N L  + +   K   V+ SSS +DP LLVKAA+G
Sbjct: 60  ASACTSLGWRSSSFLLQSPLKSTNSINFLLSTRRVSNKPISVTCSSSLSDPPLLVKAARG 119

Query: 243 EPVSRPPAWMMRQAGRYMSVYKKLA 317
           +PVSRPPAWMMRQAGRYM++Y+KLA
Sbjct: 120 DPVSRPPAWMMRQAGRYMAIYRKLA 144


>ref|XP_004137238.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Cucumis sativus]
          Length = 414

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/85 (56%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
 Frame = +3

Query: 75  ASSC-NIGWKSSSTLFQELGLLSSSNNALFVSPKT--KSFKVSASSSTADP-LLVKAAKG 242
           AS+C ++GW+SSS L Q     ++S N L  + +   K   V+ SSS +DP LLVKAA+G
Sbjct: 8   ASACTSLGWRSSSFLLQSPLKSTNSINFLLSTRRVSNKPISVTCSSSLSDPPLLVKAARG 67

Query: 243 EPVSRPPAWMMRQAGRYMSVYKKLA 317
           +PVSRPPAWMMRQAGRYM++Y+KLA
Sbjct: 68  DPVSRPPAWMMRQAGRYMAIYRKLA 92


>gb|AFK37069.1| unknown [Medicago truncatula]
          Length = 306

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/79 (55%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
 Frame = +3

Query: 90  IGWKSSSTLFQELGLLSSSNNALFVSPKTKSFKVS---ASSSTADPLLVKAAKGEPVSRP 260
           +GWKSS  LFQ+    +  ++     P    F ++   ASSS++DPLLVKAA+G+PVSRP
Sbjct: 12  LGWKSSP-LFQQSNCFNFLSSPFKPKPSLTKFTLTCSAASSSSSDPLLVKAARGDPVSRP 70

Query: 261 PAWMMRQAGRYMSVYKKLA 317
           PAWMMRQAGRYM++Y+KLA
Sbjct: 71  PAWMMRQAGRYMAIYRKLA 89


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