BLASTX nr result

ID: Cnidium21_contig00018466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018466
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|3555...   134   1e-29
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   126   2e-27
ref|XP_002535702.1| hypothetical protein RCOM_2112970 [Ricinus c...   117   8e-25
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...   101   7e-20

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/138 (53%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
 Frame = +3

Query: 39  NVGPSDVKTADHEALTLLKWLASSQAAEEINSDDELARETILSPLLPASTMFKMLERANI 218
           N+GPS +K AD+EAL LL WLASSQAAE+INSDDEL  +TILSPLLP  T+ K+LE+AN+
Sbjct: 412 NIGPSGLKVADNEALGLLSWLASSQAAEDINSDDELVCQTILSPLLPTVTIDKVLEKANM 471

Query: 219 DYESQSQQECQDILDCVEDSIDILASKKKVPQRIDNC---QIAVKENTPLTDGSNEDRIL 389
           DYE++SQQECQDILD VED  D    K++     D+    Q ++++  P  DGS +D   
Sbjct: 472 DYENESQQECQDILDSVEDLADFKGLKERASCSTDHSHSPQTSLEKMIPQVDGSGDDP-- 529

Query: 390 ITCAAKSSEVEMNCEYEK 443
             C+  SSE EM  E ++
Sbjct: 530 NDCSGNSSETEMKSETKR 547


>ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|355501292|gb|AES82495.1|
           DNA polymerase [Medicago truncatula]
          Length = 1096

 Score =  134 bits (336), Expect = 1e-29
 Identities = 75/134 (55%), Positives = 94/134 (70%), Gaps = 6/134 (4%)
 Frame = +3

Query: 60  KTADHEALTLLKWLASSQAAEEINSDDELARETILSPLLPASTMFKMLERANIDYESQSQ 239
           + AD EA  LLKWLA+SQAAE+INSDDELA ETILSPL PA+T+ KMLE+AN+ YES+SQ
Sbjct: 472 RDADMEAQNLLKWLATSQAAEDINSDDELACETILSPLPPAATIDKMLEKANMAYESESQ 531

Query: 240 QECQDILDCVEDSIDILASKKKVPQRID-NCQIAVKENT--PLTDGSNEDRILITCAAK- 407
           QECQDILD ++D + +   KKK  +  D NC I    +   P  DGSN+D     CA+  
Sbjct: 532 QECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNMIPQVDGSNDDEFSSPCASLA 591

Query: 408 --SSEVEMNCEYEK 443
             SS VE+N EY++
Sbjct: 592 EISSAVEINSEYKR 605


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  126 bits (316), Expect = 2e-27
 Identities = 73/152 (48%), Positives = 102/152 (67%), Gaps = 9/152 (5%)
 Frame = +3

Query: 15  LPADKVLSN--VGPSDVKTA-DHEALTLLKWLASSQAAEEINSDDELARETILSPLLPAS 185
           L  D++ S+  +G  D+K A D EA  +LKWLA+SQAAE+INSDDEL  ETIL+PLLPA+
Sbjct: 357 LTMDEIPSSEMIGTLDIKAAADKEAQNILKWLATSQAAEDINSDDELVYETILTPLLPAA 416

Query: 186 TMFKMLERANIDYESQSQQECQDILDCVEDSIDILASKKKVPQRIDN-CQIAVKENT--P 356
           T+ K+LE ANI YE++SQ+ECQDILD ++D +++    +K    +D+ C I    ++  P
Sbjct: 417 TIDKVLEEANIAYENESQKECQDILDSIDDMLELELPNEKPSHSLDHYCPIGASSSSMLP 476

Query: 357 LTDGSNEDRILI---TCAAKSSEVEMNCEYEK 443
             DGSN+D       + A  SS VE+N EY +
Sbjct: 477 QVDGSNDDEFSSPRDSLAGTSSLVEINSEYTR 508


>ref|XP_002535702.1| hypothetical protein RCOM_2112970 [Ricinus communis]
           gi|223522232|gb|EEF26681.1| hypothetical protein
           RCOM_2112970 [Ricinus communis]
          Length = 459

 Score =  117 bits (294), Expect = 8e-25
 Identities = 71/133 (53%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
 Frame = +3

Query: 21  ADKVLSN--VGPSDVKTADHEALTLLKWLASSQAAEEINSDDELARETILSPLLPASTMF 194
           A+ V+S+  +G  D K AD EAL LL+WLA+SQAAE+INSDDEL RETILSPLL A T+ 
Sbjct: 136 ANDVVSSGTIGTLDPKAADKEALGLLRWLATSQAAEDINSDDELVRETILSPLLQA-TIE 194

Query: 195 KMLERANIDYESQSQQECQDILDCVEDSIDILASKKKVPQRIDNCQIAVKENTPLTDGSN 374
           K+LE+AN+DYES+SQ+ECQDILD +ED  D+  SK+K     D   I  + ++    G  
Sbjct: 195 KVLEKANMDYESESQKECQDILDSIEDLFDLEGSKEKACHSSDR-SIHSQSSSETAQGD- 252

Query: 375 EDRILITCAAKSS 413
               L++  AKSS
Sbjct: 253 ---ALLSSIAKSS 262


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
           lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
           ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/86 (61%), Positives = 67/86 (77%)
 Frame = +3

Query: 48  PSDVKTADHEALTLLKWLASSQAAEEINSDDELARETILSPLLPASTMFKMLERANIDYE 227
           P++++  D EAL L KW ASSQAAE+INSDDE+ RETILSPLLP +++ K+LE A+ DY 
Sbjct: 439 PAEIQ--DAEALGLFKWFASSQAAEDINSDDEILRETILSPLLPLASINKVLEMASTDYV 496

Query: 228 SQSQQECQDILDCVEDSIDILASKKK 305
           SQSQ+ECQDILD  ED  D  +S K+
Sbjct: 497 SQSQKECQDILDSQEDLPDFGSSTKR 522


Top