BLASTX nr result

ID: Cnidium21_contig00018436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018436
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   265   6e-69
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   133   2e-29
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]   127   1e-27
emb|CAN60994.1| hypothetical protein VITISV_036935 [Vitis vinifera]   124   1e-26
emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]   124   2e-26

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  265 bits (676), Expect = 6e-69
 Identities = 141/198 (71%), Positives = 154/198 (77%), Gaps = 2/198 (1%)
 Frame = -1

Query: 588 DTAAGLWLKLEGLYMTKSLTNKLLLKQRLFSLRMQEGMPLRDHLDQLNTILLELRNIDVK 409
           +TAAGLWLKLE LYMTKSLTNKLLLKQRLF LRM EG  LR+HL+QLNT+LLELRNIDVK
Sbjct: 76  ETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLNTLLLELRNIDVK 135

Query: 408 VEDEDAALILLVSLPLSYENFVQSFIVGKDTISLEEVRSALHSRELRHKAAGTGADNQAV 229
           +EDEDAALILLVSLP+S+ENFVQSFIVGKDT+SLEEVRSALHSRELRHKA GT  D Q  
Sbjct: 136 IEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQPS 195

Query: 228 GLVAXXXXXXXXXXXXXXXXXXXXXXXXNDICNYCKEKGHWKSDCPKKKKQQDKLAGTAA 49
           GL                          +D+CNYCKEKGHWK DCPKKKKQ +K + +AA
Sbjct: 196 GLFT--SSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKFDCPKKKKQSEKQSVSAA 253

Query: 48  VA--DINSEEDIALVADE 1
           VA  D NSEEDIALVADE
Sbjct: 254 VAEEDTNSEEDIALVADE 271


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  133 bits (335), Expect = 2e-29
 Identities = 70/169 (41%), Positives = 101/169 (59%)
 Frame = -1

Query: 585 TAAGLWLKLEGLYMTKSLTNKLLLKQRLFSLRMQEGMPLRDHLDQLNTILLELRNIDVKV 406
           TA GLW K E  Y  KSLTN+L  K++L +L+M EGM +RDHL+  N I+L+L  + VKV
Sbjct: 80  TAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMSEGMQVRDHLNNFNRIILDLNGVGVKV 139

Query: 405 EDEDAALILLVSLPLSYENFVQSFIVGKDTISLEEVRSALHSRELRHKAAGTGADNQAVG 226
           E+ED A+ILL SLP SYENFV + + G+++IS  +V+ AL S+EL+   +G+   +   G
Sbjct: 140 EEEDQAMILLCSLPSSYENFVDTMMYGRBSISXNDVKDALQSKELQKLVSGSEEGSVETG 199

Query: 225 LVAXXXXXXXXXXXXXXXXXXXXXXXXNDICNYCKEKGHWKSDCPKKKK 79
           L                             C + KEKGH++ +CP+++K
Sbjct: 200 LTVSRGRSMERNGGGRSKSXSKSKAAMR--CFHXKEKGHFRKNCPQRQK 246


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score =  127 bits (320), Expect = 1e-27
 Identities = 78/197 (39%), Positives = 114/197 (57%), Gaps = 4/197 (2%)
 Frame = -1

Query: 588 DTAAGLWLKLEGLYMTKSLTNKLLLKQRLFSLRMQEGMPLRDHLDQLNTILLELRNIDVK 409
           D  A LWLKLE L+MTKSL N+L LK+RL +L+M+E M ++DH ++ N  + +LRNIDVK
Sbjct: 33  DITAKLWLKLESLHMTKSLKNRLYLKKRLHTLQMKESMSIKDHFNEFNKTIXDLRNIDVK 92

Query: 408 VEDEDAALILLVSLPLSYENFVQSFIVGKDTISLEEVRSALHSRELRHKAAGTGADNQAV 229
           V  ED A+ L+ SLP SYE+FV   + G+ T+ +++VR AL+SREL+     +   +   
Sbjct: 93  VNYEDQAIFLMCSLPNSYEHFVDIMMYGRGTLFIKDVRVALNSRELKKMVFKSRKYDSGE 152

Query: 228 GLVAXXXXXXXXXXXXXXXXXXXXXXXXNDICNYCKEKGHWKSDCPKKKKQQDKL---AG 58
           GLVA                        N+ C  CK++GH+  + P +K +++K    +G
Sbjct: 153 GLVA---RGRTRKKNNGRRGRSRSKSRGNNKCFKCKKEGHYVKNXPDRKGKENKRNYNSG 209

Query: 57  TAAVADINSE-EDIALV 10
            A  A  NS   D+ LV
Sbjct: 210 DATFAKENSNTTDVLLV 226


>emb|CAN60994.1| hypothetical protein VITISV_036935 [Vitis vinifera]
          Length = 209

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/122 (50%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
 Frame = -1

Query: 588 DTAAGLWLKLEGLYMTKSLTNKLLLKQRLFSLRMQEGMP-LRDHLDQLNTILLELRNIDV 412
           DT   LWLKLE LYMTKSLTN L LK  L++L+M+EG   +++HLD+ N  +++LRNIDV
Sbjct: 30  DTTTKLWLKLESLYMTKSLTNLLNLKNWLYTLQMKEGTSTIKNHLDEFNKTIMDLRNIDV 89

Query: 411 KVEDEDAALILLVSLPLSYENFVQSFIVGKDTISLEEVRSALHSRELRHKAAGTGADNQA 232
           +++DE+  +IL+ SL  SYE+F+ + + G+DTI +E VR+AL+SREL++K   +  D+ +
Sbjct: 90  RIDDENQTIILMCSLSNSYEHFLNTMVYGRDTIYIENVRAALNSRELKNKVFKSREDDSS 149

Query: 231 VG 226
            G
Sbjct: 150 EG 151


>emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]
          Length = 836

 Score =  124 bits (310), Expect = 2e-26
 Identities = 59/120 (49%), Positives = 90/120 (75%)
 Frame = -1

Query: 582 AAGLWLKLEGLYMTKSLTNKLLLKQRLFSLRMQEGMPLRDHLDQLNTILLELRNIDVKVE 403
           A  LWLKLE LYMTKSLTN+L LK+RL +L M++ M ++D LD+ N  +++LRNID++++
Sbjct: 532 ATKLWLKLESLYMTKSLTNRLYLKKRLHTLHMKKFMSIKDLLDEFNKTIMDLRNIDIRID 591

Query: 402 DEDAALILLVSLPLSYENFVQSFIVGKDTISLEEVRSALHSRELRHKAAGTGADNQAVGL 223
           DED A+ L+ SLP SY +FV + + G+DT+S+E+VR AL+ REL+ + + +  D+   G+
Sbjct: 592 DEDQAMTLISSLPNSYGHFVDTMMYGRDTLSIEDVREALNLRELKKRVSESRKDDFDEGI 651


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