BLASTX nr result

ID: Cnidium21_contig00018435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018435
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41133.1| D1-type cyclin [Populus x canadensis]                  247   5e-63
gb|ADG86424.1| cyclin D1 [Passiflora morifolia]                       247   7e-63
ref|XP_002312511.1| predicted protein [Populus trichocarpa] gi|1...   247   7e-63
ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   244   4e-62
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         238   3e-60

>gb|AEV41133.1| D1-type cyclin [Populus x canadensis]
          Length = 327

 Score =  247 bits (631), Expect = 5e-63
 Identities = 132/196 (67%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
 Frame = -3

Query: 1585 SLAAKMEEPMVPSLLDIQVEGAKYVFEPKTIRRMEFLVLGVLDWRLKSITPFSFLSFFAY 1406
            SLAAKMEEP+VPSLLD+QVEGAKY+FEP+TIRRME LVLGVLDWRL+SITPFSF  FFA 
Sbjct: 126  SLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPFSFTGFFAC 185

Query: 1405 KLDPQGTYTLFLISRATEIILSNIQEAGFLEFRPSCIAAATILCAANDIPNLSLINAEDA 1226
            KLDP G YT FLISRATEIILSNI+EA FLE+RPS IAAA ILCAANDIPNLSL+N E A
Sbjct: 186  KLDPAGAYTGFLISRATEIILSNIKEASFLEYRPSSIAAAAILCAANDIPNLSLVNPEHA 245

Query: 1225 ESWCDGLRKEKITSCYRLIMKETEVDRRPRKRSKP-IPQARVMTRAXXXXXXXXXXXXXX 1049
            ESWCDGL K+KI SCYRL M++  +D   RK +K  +P+ RV  RA              
Sbjct: 246  ESWCDGLSKDKIVSCYRL-MQDLVLDDSRRKSTKVLLPRLRVTIRA--RMRSSGSDSSSS 302

Query: 1048 XXXXSFKRRRINNSLW 1001
                S+K+R++NN LW
Sbjct: 303  SSSSSYKKRKLNNCLW 318


>gb|ADG86424.1| cyclin D1 [Passiflora morifolia]
          Length = 331

 Score =  247 bits (630), Expect = 7e-63
 Identities = 132/196 (67%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
 Frame = -3

Query: 1585 SLAAKMEEPMVPSLLDIQVEGAKYVFEPKTIRRMEFLVLGVLDWRLKSITPFSFLSFFAY 1406
            SLAAKMEEP+VPSLLD+QVEGAKY+FEP+TIRRME LVLGVLDWRL+SITPFSF  FFA 
Sbjct: 129  SLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPFSFTGFFAC 188

Query: 1405 KLDPQGTYTLFLISRATEIILSNIQEAGFLEFRPSCIAAATILCAANDIPNLSLINAEDA 1226
            KLDP G YT FLISRATEIILSNI+EA FLE+RPS IAAA ILCAANDIPNLSL+N E A
Sbjct: 189  KLDPAGAYTGFLISRATEIILSNIKEASFLEYRPSSIAAAAILCAANDIPNLSLVNPEHA 248

Query: 1225 ESWCDGLRKEKITSCYRLIMKETEVDRRPRKRSKP-IPQARVMTRAXXXXXXXXXXXXXX 1049
            ESWCDGL K+KI SCYRL M++  +D   RK +K  +P+ RV  RA              
Sbjct: 249  ESWCDGLSKDKIISCYRL-MQDLVLDDSRRKSTKVLLPRLRVTIRA--RMRSSGSDSSSS 305

Query: 1048 XXXXSFKRRRINNSLW 1001
                S+K+R++NN LW
Sbjct: 306  SSSSSYKKRKLNNCLW 321


>ref|XP_002312511.1| predicted protein [Populus trichocarpa] gi|159025697|emb|CAN88849.1|
            D1-type cyclin [Populus trichocarpa]
            gi|222852331|gb|EEE89878.1| predicted protein [Populus
            trichocarpa]
          Length = 328

 Score =  247 bits (630), Expect = 7e-63
 Identities = 132/196 (67%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
 Frame = -3

Query: 1585 SLAAKMEEPMVPSLLDIQVEGAKYVFEPKTIRRMEFLVLGVLDWRLKSITPFSFLSFFAY 1406
            SLAAKMEEP+VPSLLD+QVEGAKY+FEP+TIRRME LVLGVLDWRL+SITPFSF  FFA 
Sbjct: 126  SLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPFSFTGFFAC 185

Query: 1405 KLDPQGTYTLFLISRATEIILSNIQEAGFLEFRPSCIAAATILCAANDIPNLSLINAEDA 1226
            KLDP G YT FLISRATEIILSNI+EA FLE+RPS IAAA ILCAANDIPNLSL+N E A
Sbjct: 186  KLDPAGAYTGFLISRATEIILSNIKEASFLEYRPSSIAAAAILCAANDIPNLSLVNPEHA 245

Query: 1225 ESWCDGLRKEKITSCYRLIMKETEVDRRPRKRSKP-IPQARVMTRAXXXXXXXXXXXXXX 1049
            ESWCDGL K+KI SCYRL M++  +D   RK +K  +P+ RV  RA              
Sbjct: 246  ESWCDGLSKDKIISCYRL-MQDLVLDDSRRKSTKVLLPRLRVTIRA--RMRSSGSDSSSS 302

Query: 1048 XXXXSFKRRRINNSLW 1001
                S+K+R++NN LW
Sbjct: 303  SSSSSYKKRKLNNCLW 318


>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|296086502|emb|CBI32091.3|
            unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  244 bits (624), Expect = 4e-62
 Identities = 130/195 (66%), Positives = 148/195 (75%)
 Frame = -3

Query: 1585 SLAAKMEEPMVPSLLDIQVEGAKYVFEPKTIRRMEFLVLGVLDWRLKSITPFSFLSFFAY 1406
            SLAAKMEEP+VPSLLD+QVEGAK++FE KTIRRME LVLGVLDWRL+SITPFSF+ FFAY
Sbjct: 126  SLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFSFIGFFAY 185

Query: 1405 KLDPQGTYTLFLISRATEIILSNIQEAGFLEFRPSCIAAATILCAANDIPNLSLINAEDA 1226
            KLD  G+   FLISRAT+IILSNIQEA FLE+ PSCIAAA ILCAAN+IP LSL++ E A
Sbjct: 186  KLDSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCAANEIPKLSLVDPERA 245

Query: 1225 ESWCDGLRKEKITSCYRLIMKETEVDRRPRKRSKPIPQARVMTRAXXXXXXXXXXXXXXX 1046
            ESWCDGL KEKI SCY+L M+E  VD   RK  K +PQ RV  RA               
Sbjct: 246  ESWCDGLSKEKIISCYQL-MQEITVDNNRRKPPKLLPQLRVTIRA----RVRSSGSSSSS 300

Query: 1045 XXXSFKRRRINNSLW 1001
               S+KRR++NN LW
Sbjct: 301  SSSSYKRRKLNNCLW 315


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  238 bits (607), Expect = 3e-60
 Identities = 127/198 (64%), Positives = 147/198 (74%), Gaps = 3/198 (1%)
 Frame = -3

Query: 1585 SLAAKMEEPMVPSLLDIQVEGAKYVFEPKTIRRMEFLVLGVLDWRLKSITPFSFLSFFAY 1406
            SLAAKMEEP+VPSLLD+QVEGAKYVFEPKTIRRME LVLGVLDWRL+S+TPFSFL FFA 
Sbjct: 134  SLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFAC 193

Query: 1405 KLDPQGTYTLFLISRATEIILSNIQEAGFLEFRPSCIAAATILCAANDIPNLSLINAEDA 1226
            KLD  GT+T FLISRAT+IILSNIQEA FL + PSCIAAA+IL AAN+IPN S +  E A
Sbjct: 194  KLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHAANEIPNWSFVRPEHA 253

Query: 1225 ESWCDGLRKEKITSCYRLIMKETEVDRRPRKRSKPIPQARVMTR---AXXXXXXXXXXXX 1055
            ESWC+GLRKEK+  CY+L M+E  ++   RK  K +PQ RV +R                
Sbjct: 254  ESWCEGLRKEKVIGCYQL-MQELVINNNRRKPPKVLPQLRVTSRPIMRSSVSSFSASSSF 312

Query: 1054 XXXXXXSFKRRRINNSLW 1001
                  S KRR++NNSLW
Sbjct: 313  SPSSSLSCKRRKLNNSLW 330


Top