BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018430
         (2987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis...  1098   0.0  
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]  1092   0.0  
ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Popu...  1053   0.0  
ref|XP_004139814.1| PREDICTED: probable RNA helicase SDE3-like [...  1040   0.0  
gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]    1019   0.0  

>ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
            gi|297737082|emb|CBI26283.3| unnamed protein product
            [Vitis vinifera]
          Length = 877

 Score = 1098 bits (2841), Expect = 0.0
 Identities = 550/877 (62%), Positives = 684/877 (77%), Gaps = 3/877 (0%)
 Frame = +1

Query: 211  EERSLISDKGNIGFIDFDNDMSNCKYDVSAEGPIKISIPFPLIDNKPQSGYVGDTIVDKI 390
            +E S+I DKG IGFIDF+ND S C Y+ S EGP+ +S+PF     KP+S +VG+T  D +
Sbjct: 8    DECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAF-KGKPKSIFVGETATDCV 66

Query: 391  TILNTTSNSVELYRAEIYDSKPEESFTLSLMEPPSECSDVEYIQQYMESFSLEDRVLQPG 570
            T+ NTTS  VEL+   I+ S PE+SFT+SLMEPPS   D++YIQ+++ESF LEDRVLQPG
Sbjct: 67   TLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVDIKYIQEFLESFCLEDRVLQPG 126

Query: 571  KPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGSKTFRRERKKKQ 750
            + LT+W+SCKPKE+GLHT+ VH     D IER++F+LA D+V+ SLA +K + R  +KK 
Sbjct: 127  ETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPYSRGSRKKV 186

Query: 751  WPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVREILEQKQIPELIQEGLTKENYTS 930
            +      E+V GSRP R + + F+ +L  Y IP+DVRE++E KQIP+ I EGLT++NY S
Sbjct: 187  FN---VQEYVVGSRPARPNTRSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTRDNYES 243

Query: 931  YFKHLVIMEEIKMEDDMRGYDMEHVSMKSKGSRFLTLEVPGLAEKRPSLVYGDSIFARLA 1110
            YFK L+IMEEI+ME+DMR YDME V+M+ KG++FLTLEVPGLAEKRPSLV+GD IFA+LA
Sbjct: 244  YFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYIFAKLA 303

Query: 1111 SDDEYDTSCTYQGFIHRVEAEVVFLNFEQGFHSRFRASNLYNVQFTYNRLNMRRLYQAIE 1290
             +DE D S  YQGFIHRVEAE V+L F + F       +LYNV+FTYNR+NMRRLYQAI+
Sbjct: 304  YEDENDLSPPYQGFIHRVEAEQVYLGFAKEFIWHHTDESLYNVRFTYNRVNMRRLYQAID 363

Query: 1291 ASQCLEAEFLFPADSLRSRVIRTNPLVPISRVLNEEQKSAVQMILGCKGGAPYVIYGPPG 1470
            +++ LE + LFP+DS R R+I+   +VPIS  LNEEQ  +++MILGC+G  PYVI+GPPG
Sbjct: 364  SAKGLEMDLLFPSDS-RRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIHGPPG 422

Query: 1471 TGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVHVQDRDILRLNALT 1650
            TGKT T++EAILQLY TQK+ RILVCAPSNSAADH+LE++L +KAV VQ  +I RLNA +
Sbjct: 423  TGKTKTMVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRLNATS 482

Query: 1651 RPLEDIKPDYFKFSYYDEAERLFKCPPLMTLRRYRIVISTYASSSLLYAEGIKRDHFSHI 1830
            RP ED+ PD+ +F + ++   +FKCPPL  L+RYRI+ISTY S++LLYAEG+KR HFSHI
Sbjct: 483  RPYEDMNPDFIRFCFSEDL--IFKCPPLNDLKRYRIIISTYMSAALLYAEGVKRSHFSHI 540

Query: 1831 FLDEAGQASEPEIMVPLSNLCSRKTVVVLAGDPKQLGPVIYSKDAEKYGLGKSYLERLFE 2010
             LDEAGQASEPE M+PLS+LC RKTVVVLAGDP QLGPVIYSKDAE Y LGKSYLERLFE
Sbjct: 541  LLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERLFE 600

Query: 2011 FKFYDQSDQNYVIKLVKNYRCHPAILHLPSNLFYQGELIACKDDETRFSAASEDLLPNKD 2190
             +FY + D+NYV KLV+NYRCHP ILHLPS LFY+GELI CKDD++  S    ++LPN+D
Sbjct: 601  CEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDDKSS-SMTWAEILPNRD 659

Query: 2191 FPVLFFGIQGFDEREGSNPSWFNRIEASKAVEIIRNLIETKGLSDEDIGVIAPYRQQVLK 2370
            FPVLF G+QG+DEREGSNPSWFNR EASK VEII+ L  ++ L +EDIGVI PYRQQVLK
Sbjct: 660  FPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQVLK 719

Query: 2371 IKIALEGIGLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGFLSNPRRFNV 2550
            +K ALEG+ +  I+VGSVEQFQGQER+VII+STVRSTIKHN+FD  HCLGFLSNPRRFNV
Sbjct: 720  LKKALEGVDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLSNPRRFNV 779

Query: 2551 AITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPEREDLLDNLTAQDNLVN 2730
            AITRA+SLLI+IGNPHI+ KD YWNK+LWHC DN SY+GC LPER+D +D    Q +  +
Sbjct: 780  AITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQDFVDKEPVQFSFNH 839

Query: 2731 E---PWQGECCELGKQEGFGELSQENEWGESSQGGGW 2832
            E   P      E G++    E   +    E+    GW
Sbjct: 840  EEENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSDGW 876


>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
          Length = 877

 Score = 1092 bits (2825), Expect = 0.0
 Identities = 548/877 (62%), Positives = 682/877 (77%), Gaps = 3/877 (0%)
 Frame = +1

Query: 211  EERSLISDKGNIGFIDFDNDMSNCKYDVSAEGPIKISIPFPLIDNKPQSGYVGDTIVDKI 390
            +E S+I DKG IGFIDF+ND S C Y+ S EGP+ +S+PF     KP+S +VG+T  D +
Sbjct: 8    DECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAF-KGKPKSIFVGETATDCV 66

Query: 391  TILNTTSNSVELYRAEIYDSKPEESFTLSLMEPPSECSDVEYIQQYMESFSLEDRVLQPG 570
            T+ NTTS  VEL+   I+ S PE+SFT+SLMEPPS    ++YIQ+++ESF LEDRVLQPG
Sbjct: 67   TLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVXIKYIQEFLESFCLEDRVLQPG 126

Query: 571  KPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGSKTFRRERKKKQ 750
            + LT+W+SCKPKE+GLHT+ VH     D IER++F+LA D+V+ SLA +K + R  +KK 
Sbjct: 127  ETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPYSRGSRKKV 186

Query: 751  WPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVREILEQKQIPELIQEGLTKENYTS 930
            +      E+V GSRP R + + F+ +L  Y IP+DVRE++E KQIP+ I EGLT++NY S
Sbjct: 187  FN---VQEYVVGSRPARPNARSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTRDNYES 243

Query: 931  YFKHLVIMEEIKMEDDMRGYDMEHVSMKSKGSRFLTLEVPGLAEKRPSLVYGDSIFARLA 1110
            YFK L+IMEEI+ME+DMR YDME V+M+ KG++FLTLEVPGLAEKRPSLV+GD IFA+LA
Sbjct: 244  YFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYIFAKLA 303

Query: 1111 SDDEYDTSCTYQGFIHRVEAEVVFLNFEQGFHSRFRASNLYNVQFTYNRLNMRRLYQAIE 1290
             +DE D+S  YQGFIHRVEAE V+L F + F       +LYNV+FTYNR+NMRRLYQAI+
Sbjct: 304  YEDENDSSPPYQGFIHRVEAEQVYLGFAREFIWHHTDESLYNVRFTYNRVNMRRLYQAID 363

Query: 1291 ASQCLEAEFLFPADSLRSRVIRTNPLVPISRVLNEEQKSAVQMILGCKGGAPYVIYGPPG 1470
            +++ LE + LFP+DS R R+I+   +VPIS  LNEEQ  +++MILGC+G  PYVI+GPPG
Sbjct: 364  SAKGLEMDLLFPSDS-RRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIHGPPG 422

Query: 1471 TGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVHVQDRDILRLNALT 1650
            TGKT T++EAILQLY TQK+ RILVCAPSNSAADH+LE++L +KAV VQ  +I RLNA +
Sbjct: 423  TGKTKTLVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRLNATS 482

Query: 1651 RPLEDIKPDYFKFSYYDEAERLFKCPPLMTLRRYRIVISTYASSSLLYAEGIKRDHFSHI 1830
            RP ED+ PD+ +F   ++   +FKCPPL  L+RYRI+ISTY S++LLYAEG+KR HFSHI
Sbjct: 483  RPYEDMNPDFIRFCISEDL--IFKCPPLNDLKRYRIIISTYMSAALLYAEGVKRSHFSHI 540

Query: 1831 FLDEAGQASEPEIMVPLSNLCSRKTVVVLAGDPKQLGPVIYSKDAEKYGLGKSYLERLFE 2010
             LDEAGQASEPE M+PLS+LC RKTVVVLAGDP QLGPVIYSKDAE Y LGKSYLERLFE
Sbjct: 541  LLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERLFE 600

Query: 2011 FKFYDQSDQNYVIKLVKNYRCHPAILHLPSNLFYQGELIACKDDETRFSAASEDLLPNKD 2190
             +FY + D+NYV KLV+NYRCHP ILHLPS LFY+GELI CKD ++  S    ++LPN+D
Sbjct: 601  CEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDXKSS-SMTWAEILPNRD 659

Query: 2191 FPVLFFGIQGFDEREGSNPSWFNRIEASKAVEIIRNLIETKGLSDEDIGVIAPYRQQVLK 2370
            FPVLF G+QG+DEREGSNPSWFNR EASK VEII+ L  ++ L +EDIGVI PYRQQVLK
Sbjct: 660  FPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQVLK 719

Query: 2371 IKIALEGIGLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGFLSNPRRFNV 2550
            +K ALEG+ +  I+VGSVEQFQGQER+VII+STVRSTIKHN+FD  HCLGFLSNPRRFNV
Sbjct: 720  LKKALEGVDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLSNPRRFNV 779

Query: 2551 AITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPEREDLLDNLTAQDNLVN 2730
            AITRA+SLLI+IGNPHI+ KD YWNK+LWHC DN SY+GC LPER+D +D    Q +  +
Sbjct: 780  AITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQDFVDKEPVQFSFNH 839

Query: 2731 E---PWQGECCELGKQEGFGELSQENEWGESSQGGGW 2832
            E   P      E G++    E   +    E+    GW
Sbjct: 840  EEENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSDGW 876


>ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Populus trichocarpa]
            gi|222836465|gb|EEE74872.1| hypothetical protein
            POPTRDRAFT_789212 [Populus trichocarpa]
          Length = 894

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 536/845 (63%), Positives = 662/845 (78%), Gaps = 4/845 (0%)
 Frame = +1

Query: 208  GEERSLISDKGNIGFIDFDNDMSNCKYDVSAEGPIKISIPFPLIDNKPQSGYVGDTIVDK 387
            G+E S+I DKG I +ID+ ND S C YD S EGPI IS PFP  + KP+S +VG+T +D 
Sbjct: 9    GDECSVIGDKGEIEYIDYQNDKSVCSYDPSEEGPIVISAPFPFEEGKPRSVFVGETAIDS 68

Query: 388  ITILNTTSNSVELYRAEIYDSKPEESFTLSLMEPPSECSDVEYIQQYMESFSLEDRVLQP 567
            ITI NTT+ +V+L+  +IY S PE+SF LSLM+PPS  +DV+  + +M+   +EDR+LQP
Sbjct: 69   ITIKNTTAEAVDLW-TKIYASTPEDSFKLSLMKPPS-ANDVKCQEGFMDFSVMEDRMLQP 126

Query: 568  GKPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGSKTFRRERKKK 747
            G+ LTIWLSCKPKELGL+T  VH    +D IER+ F+LA D ++ SLA  K F R ++KK
Sbjct: 127  GESLTIWLSCKPKELGLYTTVVHFDVGNDRIERVAFLLADDNISQSLASKKPFSRGQRKK 186

Query: 748  QWPNLVTNEFVP-GSRPPRASIQYFKNKLRVYPIPDDVREILEQKQIPELIQEGLTKENY 924
            ++    T+ FV  GSRP RA  + +KN+L  Y IP D+R ++E+KQIP++I  GLT +NY
Sbjct: 187  KFS---TDTFVSAGSRPARAPGRAYKNRLPRYDIPKDIRALIERKQIPDVIMGGLTIDNY 243

Query: 925  TSYFKHLVIMEEIKMEDDMRGYDMEHVSMKSKGSRFLTLEVPGLAEKRPSLVYGDSIFAR 1104
             SYFK L+IMEEI++E+DMR +DME V+M+ KG+ +L+L VPGLAE+RPSLV GD IF +
Sbjct: 244  ASYFKTLLIMEEIQLEEDMRSHDMECVTMRRKGN-YLSLVVPGLAERRPSLVQGDDIFVK 302

Query: 1105 LASDDEYDTSCTYQGFIHRVEAEVVFLNFEQGFHSRFRASNLYNVQFTYNRLNMRRLYQA 1284
            LA  D  DT+  YQG+I+RVEA+ V+L F Q FHS     +LYNV F YNR++MRRLYQA
Sbjct: 303  LADAD--DTTTPYQGYIYRVEADEVYLKFYQEFHSCHNDGHLYNVHFKYNRVSMRRLYQA 360

Query: 1285 IEASQCLEAEFLFPADSLRSRVIRTNPLVPISRVLNEEQKSAVQMILGCKGGAPYVIYGP 1464
            I+A++ LE E LFP+++  SR+I T+ LVPIS  LNEEQ  +V+MILGCKGG PYVIYGP
Sbjct: 361  IDAAKDLETEMLFPSETSGSRLIETSTLVPISCSLNEEQICSVEMILGCKGGPPYVIYGP 420

Query: 1465 PGTGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVHVQDRDILRLNA 1644
            PGTGKTMT+IEAILQLY+ +K ARILVCAPSNSAADH+LEK+L ++AVH+Q+++I RLNA
Sbjct: 421  PGTGKTMTIIEAILQLYQNRKHARILVCAPSNSAADHLLEKLLSEEAVHIQEKEIFRLNA 480

Query: 1645 LTRPLEDIKPDYFKFSYYDEAERLFKCPPLMTLRRYRIVISTYASSSLLYAEGIKRDHFS 1824
             +RP +DIKPD  +F  +DE   +F CPPL  L RYRI+ISTY S+SLL AEG+KR  FS
Sbjct: 481  TSRPFDDIKPDLIRFCLFDE--HIFTCPPLGALTRYRIIISTYMSASLLNAEGVKRGQFS 538

Query: 1825 HIFLDEAGQASEPEIMVPLSNLCSRKTVVVLAGDPKQLGPVIYSKDAEKYGLGKSYLERL 2004
            HIFLDEAGQASEPE M+ +SN C+R TVVVLAGDP QLGPVI+S+DAE YGLGKSYLERL
Sbjct: 539  HIFLDEAGQASEPESMISVSNFCNRDTVVVLAGDPMQLGPVIFSRDAESYGLGKSYLERL 598

Query: 2005 FEFKFYDQSDQNYVIKLVKNYRCHPAILHLPSNLFYQGELIACKD--DETRFSAASEDLL 2178
            FE + YD  D+NYV KL++NYRCHP ILHLPS LFY+GELIACK+  D++       +LL
Sbjct: 599  FECESYDSGDENYVTKLIRNYRCHPEILHLPSTLFYEGELIACKESNDDSTSLMTLTNLL 658

Query: 2179 PNKDFPVLFFGIQGFDEREGSNPSWFNRIEASKAVEIIRNLIETKGLSDEDIGVIAPYRQ 2358
            P K+FPVLFFGIQG DERE +NPSWFNRIEASK VEI++ L     LSD DIGVI PYRQ
Sbjct: 659  PGKNFPVLFFGIQGCDEREANNPSWFNRIEASKVVEIVKKLATRGNLSDSDIGVITPYRQ 718

Query: 2359 QVLKIKIALEGIGLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGFLSNPR 2538
            QVLK+K AL+ I + +I+VGSVEQFQGQER+VIIVSTVRSTIKHNDFD  HCLGFLSNPR
Sbjct: 719  QVLKLKKALDNIDMPDIKVGSVEQFQGQERKVIIVSTVRSTIKHNDFDRVHCLGFLSNPR 778

Query: 2539 RFNVAITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPE-REDLLDNLTAQ 2715
            RFNVAITRA SLLI+ GNPHI+ KD YWNKLLWHCVDN SY+GC LPE R + +DN    
Sbjct: 779  RFNVAITRAISLLIITGNPHIISKDQYWNKLLWHCVDNDSYQGCALPEKRLECVDNYPTY 838

Query: 2716 DNLVN 2730
            ++ V+
Sbjct: 839  EDRVD 843


>ref|XP_004139814.1| PREDICTED: probable RNA helicase SDE3-like [Cucumis sativus]
            gi|449492596|ref|XP_004159043.1| PREDICTED: probable RNA
            helicase SDE3-like [Cucumis sativus]
          Length = 886

 Score = 1040 bits (2689), Expect = 0.0
 Identities = 511/870 (58%), Positives = 648/870 (74%), Gaps = 2/870 (0%)
 Frame = +1

Query: 208  GEERSLISDKGNIGFIDFDNDMSNCKYDVSAEGPIKISIPFPLIDNKPQSGYVGDTIVDK 387
            G++ S+I DKG I +ID+++D S C Y+   EGPI +S+PF  ++ KP+S +VG+T+ D 
Sbjct: 9    GDDCSVIKDKGEISYIDYEDDQSVCSYNPIEEGPIIVSVPFAFVNGKPRSVFVGETVADS 68

Query: 388  ITILNTTSNSVELYRAEIYDSKPEESFTLSLMEPPSECSDVEYIQQYMESFSLEDRVLQP 567
            ITI NTT  SV+L+   IY S PE SFTLSLMEPP   +D+E +Q ++ESFSLEDR++ P
Sbjct: 69   ITIKNTTDESVDLWAVNIYASNPENSFTLSLMEPPGPNADIEIVQAFLESFSLEDRMIHP 128

Query: 568  GKPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGSKTFRRERKKK 747
               LTIWLSCKPKE+GLHT  VH    ++ IER+ F+LA DK++ SL   K + R+R+++
Sbjct: 129  DDTLTIWLSCKPKEIGLHTTIVHFDLGNERIERVSFLLADDKISQSLVPRKPYSRDRRRR 188

Query: 748  QWPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVREILEQKQIPELIQEGLTKENYT 927
               +   + ++PG+RP R   +  KN L  Y IP  +R  L +K+IP  +QEGL ++ Y 
Sbjct: 189  ---HEAVDSYIPGTRPTRTQGRGIKNFLLQYEIPSKIRVELRRKEIPSAVQEGLKRDTYI 245

Query: 928  SYFKHLVIMEEIKMEDDMRGYDMEHVSMKSKGSRFLTLEVPGLAEKRPSLVYGDSIFARL 1107
             YF  L+ MEEI++E+DMR YDME V+MK KG  FL+LEVPGLAE+RPSLV+GD I  ++
Sbjct: 246  PYFMTLLNMEEIQLEEDMRAYDMELVTMKRKGYNFLSLEVPGLAERRPSLVHGDYILVKM 305

Query: 1108 ASDDEYDTSCTYQGFIHRVEAEVVFLNFEQGFHSRFRASNLYNVQFTYNRLNMRRLYQAI 1287
                  D+   YQG+IH VEA+ V+L F   FH   R  N YNVQFTYNR+NMRR YQA+
Sbjct: 306  PFGHTNDSVSAYQGYIHHVEADEVYLKFAPEFHINHRDGNQYNVQFTYNRINMRRFYQAV 365

Query: 1288 EASQCLEAEFLFPADSLRSRVIRTNPLVPISRVLNEEQKSAVQMILGCKGGAPYVIYGPP 1467
            +A+  L  EFLFP +    R I T PLVP++  +NEEQ   VQMILGCKG  PY+++GPP
Sbjct: 366  DAADSLAKEFLFPYEFSERRCINTTPLVPLTHNINEEQMRCVQMILGCKGAPPYLVHGPP 425

Query: 1468 GTGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVHVQDRDILRLNAL 1647
            GTGKT T++EAILQLY T+K+AR+LVCAPSNSAADHILEK+L Q+ V +++ D+ RLNA 
Sbjct: 426  GTGKTQTLVEAILQLYTTRKNARMLVCAPSNSAADHILEKLLNQEGVEIRNNDVFRLNAS 485

Query: 1648 TRPLEDIKPDYFKFSYYDEAERLFKCPPLMTLRRYRIVISTYASSSLLYAEGIKRDHFSH 1827
            TR  ++IKPD   + ++D  E++F+CPP   L RYRI++STY S+SLLYAE IKR HFSH
Sbjct: 486  TRQYDEIKPDILPYCFFD--EQIFRCPPRNALVRYRIIVSTYMSTSLLYAEDIKRGHFSH 543

Query: 1828 IFLDEAGQASEPEIMVPLSNLCSRKTVVVLAGDPKQLGPVIYSKDAEKYGLGKSYLERLF 2007
            IFLDEAGQASEPE ++P+SNLC +KTVV+LAGDP QLGPV+YSK+AE YGLGKSYLERLF
Sbjct: 544  IFLDEAGQASEPESIIPVSNLCLKKTVVILAGDPMQLGPVVYSKEAEIYGLGKSYLERLF 603

Query: 2008 EFKFYDQSDQNYVIKLVKNYRCHPAILHLPSNLFYQGELIACKDDETRFSAASEDL--LP 2181
            E ++Y   D+NYVIKL++NYRCHP ILHLPS LFY GELIACKD+ +     ++ L  LP
Sbjct: 604  ECEYYSTGDENYVIKLLRNYRCHPDILHLPSTLFYGGELIACKDENSLLMDTADILKVLP 663

Query: 2182 NKDFPVLFFGIQGFDEREGSNPSWFNRIEASKAVEIIRNLIETKGLSDEDIGVIAPYRQQ 2361
            NK+FPVLFFGIQG DEREG+NPSWFNRIE SK VEI+R L +   L++E+IGVI PYRQQ
Sbjct: 664  NKEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVVEIVRKLADGGNLTEENIGVITPYRQQ 723

Query: 2362 VLKIKIALEGIGLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGFLSNPRR 2541
            VLKI+ A + + + +I+VGSVEQFQGQERQVIIVSTVRSTIKHN+FD T+CLGFLSNPRR
Sbjct: 724  VLKIRKAFDSLDMIDIKVGSVEQFQGQERQVIIVSTVRSTIKHNEFDKTYCLGFLSNPRR 783

Query: 2542 FNVAITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPEREDLLDNLTAQDN 2721
            FNVA+TRA SLL++IGNPHI+ +D YWNKLLW CVD  SY+GC LPER+DL D +    N
Sbjct: 784  FNVAVTRAISLLVIIGNPHIINQDVYWNKLLWQCVDKESYQGCPLPERQDLTDEVQQCTN 843

Query: 2722 LVNEPWQGECCELGKQEGFGELSQENEWGE 2811
                       + G+  GF E  Q  E  E
Sbjct: 844  -----------QEGQSSGFEEAGQNQELQE 862


>gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]
          Length = 1002

 Score = 1019 bits (2636), Expect = 0.0
 Identities = 522/952 (54%), Positives = 682/952 (71%), Gaps = 20/952 (2%)
 Frame = +1

Query: 184  MGGSVYDCGEERSLISDKGNIGFIDFDNDMSNCKYDVSAEGPIKISIPFPLIDNKPQSGY 363
            M  S Y   +E S+I+DKG IGFID+ ND S+  Y+   EGP+ +S+PFP    KPQS  
Sbjct: 1    MSVSGYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVT 60

Query: 364  VGDTIVDKITILNTTSNSVELYRAEIYDSKPEESFTLSLMEPPSECSDVEYIQQYMESFS 543
            VG+T  D  T+ NT    V+L+  +IY S PE+SFTLS+++PPS+ SD++  Q + E+F+
Sbjct: 61   VGETSFDSFTVKNTMDEPVDLW-TKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFT 119

Query: 544  LEDRVLQPGKPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGSKT 723
            LEDR+L+PG  LTIW+SCKPK++GLHT  V +    D +ER+VF+LA DK++ SL  ++ 
Sbjct: 120  LEDRMLEPGDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRP 179

Query: 724  FRRERKKKQWPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVREILEQKQIPELIQE 903
            + R R+  +  +   +++V GSRP +   + F+N+L +Y IP ++RE++E K+ P+ + E
Sbjct: 180  YSRSRRAPK-KDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNE 238

Query: 904  GLTKENYTSYFKHLVIMEEIKMEDDMRGYDMEHVSMKSKGSRFLTLEVPGLAEKRPSLVY 1083
            GLT  NY +Y+K L+IMEE+++E+DMR YDME+VSMK +G  +L+LEVPGLAE+RPSLV+
Sbjct: 239  GLTARNYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGI-YLSLEVPGLAERRPSLVH 297

Query: 1084 GDSIFARLASDDEYDTSCTYQGFIHRVEAEVVFLNFEQGFHSRFRASNLYNVQFTYNRLN 1263
            GD IF R A DD  D +  YQGF+HRVEA+ V L F   FH R  A ++YNV+FTYNR+N
Sbjct: 298  GDFIFVRHAYDDGTDHA--YQGFVHRVEADEVHLKFASEFHQRHTAGSVYNVRFTYNRIN 355

Query: 1264 MRRLYQAIEASQCLEAEFLFPADSLRSRVIRTNPLVPISRVLNEEQKSAVQMILGCKGGA 1443
             RRLYQA++A++ L+  FLFP+     R+I+T P VPIS  LN EQ  +++M+LGCKG  
Sbjct: 356  TRRLYQAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAP 415

Query: 1444 PYVIYGPPGTGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVHVQDR 1623
            PYVI+GPPGTGKTMT++EAI+QLY TQ++AR+LVCAPSNSAADHILEK+L  + V ++D 
Sbjct: 416  PYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDN 475

Query: 1624 DILRLNALTRPLEDIKPDYFKFSYYDEAERLFKCPPLMTLRRYRIVISTYASSSLLYAEG 1803
            +I RLNA TR  E+IKP+  +F ++DE   +FKCPPL  L RY++V+STY S+SLL AEG
Sbjct: 476  EIFRLNAATRSYEEIKPEIIRFCFFDEL--IFKCPPLKALTRYKLVVSTYMSASLLNAEG 533

Query: 1804 IKRDHFSHIFLDEAGQASEPEIMVPLSNLCSRKTVVVLAGDPKQLGPVIYSKDAEKYGLG 1983
            +KR HF+HI LDEAGQASEPE M+ +SNLC  +TVVVLAGDP+QLGPVIYS+DAE  GLG
Sbjct: 534  VKRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLG 593

Query: 1984 KSYLERLFEFKFYDQSDQNYVIKLVKNYRCHPAILHLPSNLFYQGELIACKDDETRFSAA 2163
            KSYLERLFE  +Y + D+NYV KLVKNYRCHP IL LPS LFY GEL+A K+ ET    A
Sbjct: 594  KSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKE-ETDSVLA 652

Query: 2164 SEDLLPNKDFPVLFFGIQGFDEREGSNPSWFNRIEASKAVEIIRNLIETKGLSDEDIGVI 2343
            S + LPNK+FP++F+GIQG DEREG+NPSWFNRIE SK +E I+ L     + +EDIGVI
Sbjct: 653  SLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVI 712

Query: 2344 APYRQQVLKIKIALEGIGLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGF 2523
             PYRQQV+KIK  L+ + ++ ++VGSVEQFQGQE+QVII+STVRSTIKHN+FD  +CLGF
Sbjct: 713  TPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGF 772

Query: 2524 LSNPRRFNVAITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPEREDLLDN 2703
            LSNPRRFNVAITRA SLL++IGNPHI+CKD  WNKLLW CVDN +Y+GC LPE+E+ ++ 
Sbjct: 773  LSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEE 832

Query: 2704 LTAQDNLVNEP-------W--QGECCELGKQE---------GFGELSQENEW--GESSQG 2823
               Q+   N P       W   GE    G  E           G   ++NEW  G +S G
Sbjct: 833  PFKQEGSSNGPQYPPEAEWNNSGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGWNSNG 892

Query: 2824 GGWNQDPPWEGENCETRDETFQGGGLNQVNCDPPWEGEYCETRDETCQDREW 2979
            GG  +   W        D     GG N +N     EG     +D   Q+ EW
Sbjct: 893  GGTKKKDEWS-------DGWDNNGGTNGIN----QEGSSNAPQDP--QEAEW 931