BLASTX nr result

ID: Cnidium21_contig00018393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018393
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38951.1| unknown [Lotus japonicus]                              395   e-108
gb|AFK42123.1| unknown [Medicago truncatula]                          387   e-105
ref|XP_004134117.1| PREDICTED: stem-specific protein TSJT1-like ...   384   e-104
ref|XP_002517063.1| Stem-specific protein TSJT1, putative [Ricin...   384   e-104
ref|XP_003536502.1| PREDICTED: stem-specific protein TSJT1 [Glyc...   382   e-104

>gb|AFK38951.1| unknown [Lotus japonicus]
          Length = 250

 Score =  395 bits (1015), Expect = e-108
 Identities = 191/250 (76%), Positives = 220/250 (88%), Gaps = 1/250 (0%)
 Frame = -3

Query: 769 MLAVFDKSVAKSPEALQNGQSESVSALKDGFLAHHFSSVKPGSVTINLGPAGVLAYSMDK 590
           MLAVF KSVAKSPE LQ+ QS SVSA+KDGFLA HF+SV P SVT+NL P+ +LAYS+DK
Sbjct: 1   MLAVFGKSVAKSPEGLQSPQSSSVSAIKDGFLAKHFTSVYPSSVTLNLVPSALLAYSIDK 60

Query: 589 QNPLLPRLFAVTDDIFCVFQGHIENVAHLKQQYGMGKNANEVIIVLEAYRTLRDRGPYPA 410
            NPLLPRLFAV DDIFC+FQGHI+NVAHLKQQYG+ K ANEVIIV+EAYRTLRDRGPYPA
Sbjct: 61  HNPLLPRLFAVVDDIFCLFQGHIDNVAHLKQQYGLNKTANEVIIVIEAYRTLRDRGPYPA 120

Query: 409 DQVLRDFHGKFAFVLYDGSSKSAFVAADADGSVPFFWGTDSEGDLVIXXXXXXXXXXXXX 230
           DQV+RDF GKFAF+L+D SSK+AFVA+D+DGSVPFFWGTD++G+LV+             
Sbjct: 121 DQVVRDFQGKFAFILFDSSSKTAFVASDSDGSVPFFWGTDADGNLVLSDEMGIVSKSCGK 180

Query: 229 SFAPFPKGCFFTSSGGLRSFEHPMNELKPMPRVDSSGEVCGATFKVDAESRKE-TGMPRV 53
           SFAPFPKGCFFT+SGGLR+FEHP+NELKP+PRVDSSG+VCGATFKVDAE++KE TGMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRNFEHPLNELKPVPRVDSSGQVCGATFKVDAETKKETTGMPRV 240

Query: 52  GSAANWSQHY 23
           GSAANWS +Y
Sbjct: 241 GSAANWSSNY 250


>gb|AFK42123.1| unknown [Medicago truncatula]
          Length = 250

 Score =  387 bits (994), Expect = e-105
 Identities = 188/249 (75%), Positives = 218/249 (87%), Gaps = 1/249 (0%)
 Frame = -3

Query: 769 MLAVFDKSVAKSPEALQNGQSESVSALKDGFLAHHFSSVKPGSVTINLGPAGVLAYSMDK 590
           MLAVFDKSVAKSPE LQ+ QS SVSALKDGFLA HFSS  PGSVT+NLG +GVLAYS+++
Sbjct: 1   MLAVFDKSVAKSPEGLQSPQSNSVSALKDGFLAQHFSSEFPGSVTVNLGSSGVLAYSLNQ 60

Query: 589 QNPLLPRLFAVTDDIFCVFQGHIENVAHLKQQYGMGKNANEVIIVLEAYRTLRDRGPYPA 410
           QN LLPRLFAV DDIFC+FQGH+ENVA+LKQQYG+ K ANEVIIV+EAYRTLRDRGPYPA
Sbjct: 61  QNFLLPRLFAVVDDIFCLFQGHLENVANLKQQYGLNKTANEVIIVIEAYRTLRDRGPYPA 120

Query: 409 DQVLRDFHGKFAFVLYDGSSKSAFVAADADGSVPFFWGTDSEGDLVIXXXXXXXXXXXXX 230
            QV+RDF GKFAF+L+D  SK+AF++ADADG+VPFFWGTD++G+LV+             
Sbjct: 121 SQVVRDFQGKFAFILFDSGSKNAFISADADGNVPFFWGTDADGNLVLSDETDIVTKSCGK 180

Query: 229 SFAPFPKGCFFTSSGGLRSFEHPMNELKPMPRVDSSGEVCGATFKVDAESRKE-TGMPRV 53
           S+APFPKGCFFT+SGGL SFEHP+NELKP+PRVDSSG+VCGATFKVDAE++KE TGMPRV
Sbjct: 181 SYAPFPKGCFFTTSGGLSSFEHPLNELKPVPRVDSSGQVCGATFKVDAEAKKESTGMPRV 240

Query: 52  GSAANWSQH 26
           GSAANWS +
Sbjct: 241 GSAANWSNN 249


>ref|XP_004134117.1| PREDICTED: stem-specific protein TSJT1-like [Cucumis sativus]
           gi|449504146|ref|XP_004162265.1| PREDICTED: LOW QUALITY
           PROTEIN: stem-specific protein TSJT1-like [Cucumis
           sativus]
          Length = 250

 Score =  384 bits (986), Expect = e-104
 Identities = 187/250 (74%), Positives = 213/250 (85%), Gaps = 1/250 (0%)
 Frame = -3

Query: 769 MLAVFDKSVAKSPEALQNGQSESVSALKDGFLAHHFSSVKPGSVTINLGPAGVLAYSMDK 590
           M AVFDKSVAKSP+ALQ+ +S+S  ALKDG LA HFSSV PGSV +NLG +G+LAYS++K
Sbjct: 1   MFAVFDKSVAKSPDALQSPESDSTWALKDGILAQHFSSVYPGSVIVNLGSSGLLAYSVEK 60

Query: 589 QNPLLPRLFAVTDDIFCVFQGHIENVAHLKQQYGMGKNANEVIIVLEAYRTLRDRGPYPA 410
           QNP+LPRLFAV DDIFC+FQGHIENVA LKQQYG+ K ANEVIIV+EAYRTLRDRGPYPA
Sbjct: 61  QNPILPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 409 DQVLRDFHGKFAFVLYDGSSKSAFVAADADGSVPFFWGTDSEGDLVIXXXXXXXXXXXXX 230
           DQV+RD  GKF F+LYD SSK++F A+DADGSVPF WGTDSEG LV+             
Sbjct: 121 DQVVRDIQGKFVFILYDSSSKTSFFASDADGSVPFHWGTDSEGQLVLSDDVEIMKKGCGK 180

Query: 229 SFAPFPKGCFFTSSGGLRSFEHPMNELKPMPRVDSSGEVCGATFKVDAESRKE-TGMPRV 53
           SFAPFPKGCFFT+SGGLRS+EHP+NELKP+PRVDSSG VCGA FKVDAE+RKE +GMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGNVCGANFKVDAEARKESSGMPRV 240

Query: 52  GSAANWSQHY 23
           GSAANWS +Y
Sbjct: 241 GSAANWSSNY 250


>ref|XP_002517063.1| Stem-specific protein TSJT1, putative [Ricinus communis]
           gi|223543698|gb|EEF45226.1| Stem-specific protein TSJT1,
           putative [Ricinus communis]
          Length = 249

 Score =  384 bits (985), Expect = e-104
 Identities = 184/249 (73%), Positives = 211/249 (84%)
 Frame = -3

Query: 769 MLAVFDKSVAKSPEALQNGQSESVSALKDGFLAHHFSSVKPGSVTINLGPAGVLAYSMDK 590
           MLAVFD +VAK P+ALQ+  S S SALKDGFLA HF S+ P SVT+NLG AG++AYS+DK
Sbjct: 1   MLAVFDNTVAKCPDALQSPHSASSSALKDGFLAKHFGSIHPASVTVNLGTAGIIAYSLDK 60

Query: 589 QNPLLPRLFAVTDDIFCVFQGHIENVAHLKQQYGMGKNANEVIIVLEAYRTLRDRGPYPA 410
           QNPLLPRLFAV DDIFC+FQGHIEN+A LKQQYG+ K ANEVIIV+EA+RTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENIAVLKQQYGLNKTANEVIIVIEAFRTLRDRGPYPA 120

Query: 409 DQVLRDFHGKFAFVLYDGSSKSAFVAADADGSVPFFWGTDSEGDLVIXXXXXXXXXXXXX 230
           DQV+RD  GKFAFVLYD +SK+ F+AADADGSVPFFWG DSE  LV+             
Sbjct: 121 DQVVRDIQGKFAFVLYDSTSKATFIAADADGSVPFFWGADSERHLVLSDDAQILQQACGK 180

Query: 229 SFAPFPKGCFFTSSGGLRSFEHPMNELKPMPRVDSSGEVCGATFKVDAESRKETGMPRVG 50
           SFAPFPKGCFFT+SGGLRS+EHP+NELKP+PRVDSSG+VCGATFKVDAE++KE GMPRVG
Sbjct: 181 SFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGQVCGATFKVDAETKKEGGMPRVG 240

Query: 49  SAANWSQHY 23
           SA +WS +Y
Sbjct: 241 SAYDWSSNY 249


>ref|XP_003536502.1| PREDICTED: stem-specific protein TSJT1 [Glycine max]
          Length = 250

 Score =  382 bits (982), Expect = e-104
 Identities = 187/249 (75%), Positives = 214/249 (85%), Gaps = 1/249 (0%)
 Frame = -3

Query: 769 MLAVFDKSVAKSPEALQNGQSESVSALKDGFLAHHFSSVKPGSVTINLGPAGVLAYSMDK 590
           MLAVFDKSVAKSPE LQ+  S SVSALKDGFLA HFSSV PGSVT+NLG +G+LAYS+ K
Sbjct: 1   MLAVFDKSVAKSPEGLQSPHSNSVSALKDGFLAEHFSSVHPGSVTVNLGSSGLLAYSLHK 60

Query: 589 QNPLLPRLFAVTDDIFCVFQGHIENVAHLKQQYGMGKNANEVIIVLEAYRTLRDRGPYPA 410
           QNPLLPRLFAV DDIFC+FQGH+ENVA+LKQQYG+ K A EVII++EAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHLENVANLKQQYGLNKTATEVIIIIEAYRTLRDRGPYPA 120

Query: 409 DQVLRDFHGKFAFVLYDGSSKSAFVAADADGSVPFFWGTDSEGDLVIXXXXXXXXXXXXX 230
            QV+RDF GKFAF+LYD  SK+AFVAADADGSVPF WGTD++G+LV              
Sbjct: 121 AQVVRDFQGKFAFILYDSGSKTAFVAADADGSVPFVWGTDADGNLVFSDETEIVTKSCGK 180

Query: 229 SFAPFPKGCFFTSSGGLRSFEHPMNELKPMPRVDSSGEVCGATFKVDAESRKE-TGMPRV 53
           S+APFPKG FF++SGGL SFEHP+NE+KP+PRVDSSG+VCGATFKVDAE++KE TGMPRV
Sbjct: 181 SYAPFPKGFFFSTSGGLSSFEHPLNEVKPVPRVDSSGQVCGATFKVDAEAKKEATGMPRV 240

Query: 52  GSAANWSQH 26
           GSAANWS +
Sbjct: 241 GSAANWSNN 249


Top