BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018324
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, ...   400   e-109
ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...   399   e-108
gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]      398   e-108
ref|XP_002516245.1| chlorophyll A/B binding protein, putative [R...   394   e-107
emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]   392   e-107

>ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
            vinifera] gi|297738533|emb|CBI27778.3| unnamed protein
            product [Vitis vinifera]
          Length = 259

 Score =  400 bits (1027), Expect = e-109
 Identities = 194/264 (73%), Positives = 217/264 (82%)
 Frame = -3

Query: 1068 MALAIVSNTAFWGLRIRAVPRKCFTGKVIRFSVQSRGGRIRTNATKGVSSVCEPLPPDRP 889
            MAL+I S TAF  L  R V  K F  K+  +      GR+R NATKGVSSVCEPLPPDRP
Sbjct: 1    MALSIAS-TAFSSLPTREVSSKHFPRKLTTWLP----GRVRLNATKGVSSVCEPLPPDRP 55

Query: 888  VWFPGTSPPEWLDGSLPGDFGFXXXXXXXXXXXLKWFAQAELIHGRWAMLAVAGILIPEW 709
            +WFPG+SPPEWLDGSLPGDFGF           L+WFAQAEL+H RWAMLAVAGILIPE 
Sbjct: 56   LWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAGILIPEC 115

Query: 708  LQSLGFIDKFSWYEAGSVKYFADPATLFVVQLALMGWVEGRRWADIINPGCVDIEPKLPH 529
            L+ LGFI+ FSWY+AG+ ++FADP TLFVVQLALMGWVEGRRWAD+INPGCVDI+   P+
Sbjct: 116  LERLGFIENFSWYDAGAQEFFADPTTLFVVQLALMGWVEGRRWADLINPGCVDIQLTFPN 175

Query: 528  KKNPKADVGYPGGLFFDPWMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAIYTGQS 349
            K  PK DVGYPGGL+FDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAF+GFCFQAIYTG+ 
Sbjct: 176  KAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGEG 235

Query: 348  PLENLAAHIADPGHVNIFSAFTSQ 277
            P+ENL AHIADPGH N+FSAFTSQ
Sbjct: 236  PIENLMAHIADPGHCNVFSAFTSQ 259


>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
            gi|222833488|gb|EEE71965.1| light-harvesting complex I
            protein Lhca6 [Populus trichocarpa]
          Length = 261

 Score =  399 bits (1024), Expect = e-108
 Identities = 184/249 (73%), Positives = 207/249 (83%)
 Frame = -3

Query: 1026 RIRAVPRKCFTGKVIRFSVQSRGGRIRTNATKGVSSVCEPLPPDRPVWFPGTSPPEWLDG 847
            R R  P+K   GK+ +     +  ++R NATKGVSSVCEPLPPDRP+WFPG+SPPEWLDG
Sbjct: 16   RTRDKPQKSLLGKIEK----CQAVKVRVNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDG 71

Query: 846  SLPGDFGFXXXXXXXXXXXLKWFAQAELIHGRWAMLAVAGILIPEWLQSLGFIDKFSWYE 667
            SLPGDFGF           LKWFAQAELIHGRWAMLA AGILIPEWL+ LGFID F+W++
Sbjct: 72   SLPGDFGFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLGFIDNFNWFD 131

Query: 666  AGSVKYFADPATLFVVQLALMGWVEGRRWADIINPGCVDIEPKLPHKKNPKADVGYPGGL 487
            AG+ +YFADP TLFVVQL LMGW+EGRRWAD+I PGCVDI+PKLPHK  PK DVGYPGGL
Sbjct: 132  AGTREYFADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDVGYPGGL 191

Query: 486  FFDPWMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAIYTGQSPLENLAAHIADPGH 307
            +FDPW WGRGSPEPVM +RTKEIKNGRLAMLAF+GF FQAIYTG+ P++NL AHIADPGH
Sbjct: 192  WFDPWNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGH 251

Query: 306  VNIFSAFTS 280
             NIFSAFTS
Sbjct: 252  CNIFSAFTS 260


>gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 261

 Score =  398 bits (1023), Expect = e-108
 Identities = 183/249 (73%), Positives = 207/249 (83%)
 Frame = -3

Query: 1026 RIRAVPRKCFTGKVIRFSVQSRGGRIRTNATKGVSSVCEPLPPDRPVWFPGTSPPEWLDG 847
            R R  P+K   GK+ +     +  ++R NATKGVSSVCEPLPPDRP+WFPG+SPPEWLDG
Sbjct: 16   RTRDKPQKSLLGKIEK----CQAVKVRVNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDG 71

Query: 846  SLPGDFGFXXXXXXXXXXXLKWFAQAELIHGRWAMLAVAGILIPEWLQSLGFIDKFSWYE 667
            SLPGDFGF           LKWFAQAELIHGRWAMLA AGILIPEWL+ LGFID F+W++
Sbjct: 72   SLPGDFGFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLGFIDNFNWFD 131

Query: 666  AGSVKYFADPATLFVVQLALMGWVEGRRWADIINPGCVDIEPKLPHKKNPKADVGYPGGL 487
            AG+ +YFADP TLFVVQL LMGW+EGRRWAD+I PGCVDI+PKLPHK  PK D+GYPGGL
Sbjct: 132  AGTREYFADPTTLFVVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDIGYPGGL 191

Query: 486  FFDPWMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAIYTGQSPLENLAAHIADPGH 307
            +FDPW WGRGSPEPVM +RTKEIKNGRLAMLAF+GF FQAIYTG+ P++NL AHIADPGH
Sbjct: 192  WFDPWNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGH 251

Query: 306  VNIFSAFTS 280
             NIFSAFTS
Sbjct: 252  CNIFSAFTS 260


>ref|XP_002516245.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223544731|gb|EEF46247.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 297

 Score =  394 bits (1013), Expect = e-107
 Identities = 189/266 (71%), Positives = 218/266 (81%), Gaps = 2/266 (0%)
 Frame = -3

Query: 1068 MALAIVSNTAFWGLR-IRAVPRKCFTGKVIRFSVQSRGGRIRTNATKG-VSSVCEPLPPD 895
            MAL I S++    L   R +P+K F  K+   + Q    +++ NATKG VS+VCEPLPPD
Sbjct: 34   MALTIASSSLSSLLSSTREIPQKAFIRKI--GTCQVGKAKVKLNATKGGVSTVCEPLPPD 91

Query: 894  RPVWFPGTSPPEWLDGSLPGDFGFXXXXXXXXXXXLKWFAQAELIHGRWAMLAVAGILIP 715
            RP+WFPG+SPPEWLDGSLPGDFGF           LKWFAQAEL+H RWAMLAVAGILIP
Sbjct: 92   RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLAVAGILIP 151

Query: 714  EWLQSLGFIDKFSWYEAGSVKYFADPATLFVVQLALMGWVEGRRWADIINPGCVDIEPKL 535
            EWL+SLGFI+ ++W++AG+ +YFADP TLF+VQL LMGWVEGRRWAD+I PGCVDIEP L
Sbjct: 152  EWLESLGFIENYNWFDAGAREYFADPTTLFIVQLVLMGWVEGRRWADMIKPGCVDIEPTL 211

Query: 534  PHKKNPKADVGYPGGLFFDPWMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAIYTG 355
            P+K  PK DVGYPGGL+FDP MWGRGSPEPVMVLRTKEIKNGRLAMLAF+GFCFQA+YTG
Sbjct: 212  PNKTKPKPDVGYPGGLWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTG 271

Query: 354  QSPLENLAAHIADPGHVNIFSAFTSQ 277
            + P+ENL AHIADPGH NIFSAFTSQ
Sbjct: 272  EGPIENLMAHIADPGHCNIFSAFTSQ 297


>emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]
          Length = 229

 Score =  392 bits (1007), Expect = e-107
 Identities = 180/227 (79%), Positives = 200/227 (88%)
 Frame = -3

Query: 957 GRIRTNATKGVSSVCEPLPPDRPVWFPGTSPPEWLDGSLPGDFGFXXXXXXXXXXXLKWF 778
           GR+R NATKGVSSVCEPLPPDRP+WFPG+SPPEWLDGSLPGDFGF           L+WF
Sbjct: 3   GRVRLNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWF 62

Query: 777 AQAELIHGRWAMLAVAGILIPEWLQSLGFIDKFSWYEAGSVKYFADPATLFVVQLALMGW 598
           AQAEL+H RWAMLAVAGILIPE L+ LGFI+ FSWY+AG+ ++FADP TLFVVQLALMGW
Sbjct: 63  AQAELMHSRWAMLAVAGILIPECLERLGFIENFSWYDAGAQEFFADPTTLFVVQLALMGW 122

Query: 597 VEGRRWADIINPGCVDIEPKLPHKKNPKADVGYPGGLFFDPWMWGRGSPEPVMVLRTKEI 418
           VEGRRWAD+INPGCVDI+   P+K  PK DVGYPGGL+FDP+MWGRGSPEPVMVLRTKEI
Sbjct: 123 VEGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEI 182

Query: 417 KNGRLAMLAFLGFCFQAIYTGQSPLENLAAHIADPGHVNIFSAFTSQ 277
           KNGRLAMLAF+GFCFQAIYTG+ P+ENL AHIADPGH N+FSAFTSQ
Sbjct: 183 KNGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTSQ 229