BLASTX nr result

ID: Cnidium21_contig00018314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018314
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...    76   3e-12
ref|NP_568760.1| E3 ubiquitin protein ligase RIN3 [Arabidopsis t...    74   1e-11
ref|XP_003527544.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...    74   1e-11
ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...    74   1e-11
ref|NP_001190515.1| E3 ubiquitin protein ligase RIN3 [Arabidopsi...    74   1e-11

>ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Cucumis sativus]
          Length = 586

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   ILAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLR 118
           I+AMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLL+
Sbjct: 547 IIAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLQ 585


>ref|NP_568760.1| E3 ubiquitin protein ligase RIN3 [Arabidopsis thaliana]
           gi|300681231|sp|Q8W4Q5.2|RIN3_ARATH RecName: Full=E3
           ubiquitin protein ligase RIN3; AltName:
           Full=RPM1-interacting protein 3
           gi|332008699|gb|AED96082.1| E3 ubiquitin protein ligase
           RIN3 [Arabidopsis thaliana]
          Length = 577

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   ILAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLR 118
           ILAMAETVREVLPHVPDE+IFQDLQRTNSV+VTVNNLL+
Sbjct: 538 ILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLLQ 576


>ref|XP_003527544.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Glycine max]
          Length = 586

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   ILAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLR 118
           ILAMAETVREVLPH+PD++IFQDLQRTNSVTVTVNNLL+
Sbjct: 547 ILAMAETVREVLPHIPDDMIFQDLQRTNSVTVTVNNLLQ 585


>ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Glycine max]
          Length = 586

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   ILAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLR 118
           ILAMAETVREVLPH+PD++IFQDLQRTNSVTVTVNNLL+
Sbjct: 547 ILAMAETVREVLPHIPDDMIFQDLQRTNSVTVTVNNLLQ 585


>ref|NP_001190515.1| E3 ubiquitin protein ligase RIN3 [Arabidopsis thaliana]
           gi|332008700|gb|AED96083.1| E3 ubiquitin protein ligase
           RIN3 [Arabidopsis thaliana]
          Length = 595

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   ILAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLR 118
           ILAMAETVREVLPHVPDE+IFQDLQRTNSV+VTVNNLL+
Sbjct: 556 ILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLLQ 594


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