BLASTX nr result

ID: Cnidium21_contig00018264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018264
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284155.1| PREDICTED: transcription repressor MYB4 [Vit...   173   5e-41
gb|AFX64995.1| MybC2-L1 [Vitis vinifera]                              171   3e-40
gb|ABW34393.1| R2R3 MYB C2 repressor motif-like1 protein [Vitis ...   170   5e-40
ref|XP_002315890.1| predicted protein [Populus trichocarpa] gi|2...   163   6e-38
gb|ADL36757.1| MYB domain class transcription factor [Malus x do...   162   9e-38

>ref|XP_002284155.1| PREDICTED: transcription repressor MYB4 [Vitis vinifera]
           gi|297737716|emb|CBI26917.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  173 bits (438), Expect = 5e-41
 Identities = 90/137 (65%), Positives = 102/137 (74%), Gaps = 8/137 (5%)
 Frame = -1

Query: 592 MRKPCREKSYTKKARALSKKFEDEMLVEDAGSP--------PQPTGVLGCGKSCRLRLIN 437
           MRKPC +K  T K  A SK+ ED+ L++             PQ  G+L CGKSCRLR IN
Sbjct: 1   MRKPCCDKQDTNKG-AWSKQ-EDQKLIDYIRKNGEGCWRTLPQAAGLLRCGKSCRLRWIN 58

Query: 436 DPRPDLNSDYFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNQVENYWNSHLKRKLISI 257
             RPDL    F EDEEDLIIKLHALLGNRWSLIAGRLPGRTDN+V+NYWNSHL+RKLI++
Sbjct: 59  YLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINM 118

Query: 256 GIDPNNHGLSHTFPRPK 206
           GIDPNNH LSH FPRP+
Sbjct: 119 GIDPNNHRLSHNFPRPR 135


>gb|AFX64995.1| MybC2-L1 [Vitis vinifera]
          Length = 225

 Score =  171 bits (432), Expect = 3e-40
 Identities = 89/137 (64%), Positives = 101/137 (73%), Gaps = 8/137 (5%)
 Frame = -1

Query: 592 MRKPCREKSYTKKARALSKKFEDEMLVEDAGSP--------PQPTGVLGCGKSCRLRLIN 437
           MR PC +K  T K  A SK+ ED+ L++             PQ  G+L CGKSCRLR IN
Sbjct: 1   MRMPCCDKQDTNKG-AWSKQ-EDQKLIDYIRKNGEGCWRTLPQAAGLLRCGKSCRLRWIN 58

Query: 436 DPRPDLNSDYFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNQVENYWNSHLKRKLISI 257
             RPDL    F EDEEDLIIKLHALLGNRWSLIAGRLPGRTDN+V+NYWNSHL+RKLI++
Sbjct: 59  YLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINM 118

Query: 256 GIDPNNHGLSHTFPRPK 206
           GIDPNNH LSH FPRP+
Sbjct: 119 GIDPNNHRLSHNFPRPR 135


>gb|ABW34393.1| R2R3 MYB C2 repressor motif-like1 protein [Vitis vinifera]
          Length = 225

 Score =  170 bits (430), Expect = 5e-40
 Identities = 89/137 (64%), Positives = 101/137 (73%), Gaps = 8/137 (5%)
 Frame = -1

Query: 592 MRKPCREKSYTKKARALSKKFEDEMLVEDAGSP--------PQPTGVLGCGKSCRLRLIN 437
           MRKPC +K  T K  A SK+ ED+ L++             PQ  G+L CGKSCRLR IN
Sbjct: 1   MRKPCCDKQDTNKG-AWSKQ-EDQKLIDYIRKNGEGCWRTLPQAAGLLRCGKSCRLRWIN 58

Query: 436 DPRPDLNSDYFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNQVENYWNSHLKRKLISI 257
             RPDL    F EDEEDLIIKLHALLGNRWSLIAGR PGRTDN+V+NYWNSHL+RKLI++
Sbjct: 59  YLRPDLKRGDFAEDEEDLIIKLHALLGNRWSLIAGRPPGRTDNEVKNYWNSHLRRKLINM 118

Query: 256 GIDPNNHGLSHTFPRPK 206
           GIDPNNH LSH FPRP+
Sbjct: 119 GIDPNNHRLSHNFPRPR 135


>ref|XP_002315890.1| predicted protein [Populus trichocarpa] gi|222864930|gb|EEF02061.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  163 bits (412), Expect = 6e-38
 Identities = 87/137 (63%), Positives = 100/137 (72%), Gaps = 8/137 (5%)
 Frame = -1

Query: 592 MRKPCREKSYTKKARALSKKFEDEMLVEDAG--------SPPQPTGVLGCGKSCRLRLIN 437
           MRKPC +K  T K  A SK+ ED+ L++           S PQ  G+L CGKSCRLR IN
Sbjct: 1   MRKPCCDKQDTNKG-AWSKE-EDQKLIDYIRKHGEGCWRSLPQAAGLLRCGKSCRLRWIN 58

Query: 436 DPRPDLNSDYFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNQVENYWNSHLKRKLISI 257
             RPDL    FGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDN+V+NYWNSHL+RKLI++
Sbjct: 59  YLRPDLKRGNFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINM 118

Query: 256 GIDPNNHGLSHTFPRPK 206
           GIDPNNH L+    R +
Sbjct: 119 GIDPNNHRLNQNLLRSR 135


>gb|ADL36757.1| MYB domain class transcription factor [Malus x domestica]
          Length = 196

 Score =  162 bits (410), Expect = 9e-38
 Identities = 87/132 (65%), Positives = 98/132 (74%), Gaps = 8/132 (6%)
 Frame = -1

Query: 592 MRKPCREKSYTKKARALSKKFEDEML---VEDAG-----SPPQPTGVLGCGKSCRLRLIN 437
           MRKPC EK  T K  A SK+ EDE L   VE  G     S P   G+L CGKSCRLR +N
Sbjct: 1   MRKPCCEKKKTNKG-AWSKQ-EDEKLTEFVEKNGEGSWRSLPLAAGLLRCGKSCRLRWVN 58

Query: 436 DPRPDLNSDYFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNQVENYWNSHLKRKLISI 257
             RP+L    FGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDN+V+NYWN+HL+RKLI +
Sbjct: 59  YLRPNLKRGNFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNTHLRRKLIQM 118

Query: 256 GIDPNNHGLSHT 221
           G+DPNNH + HT
Sbjct: 119 GVDPNNHRIGHT 130


Top