BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018263
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...   181   6e-44
gb|AAC08937.1| RPB140 [Chloranthus spicatus]                          181   6e-44
emb|CAD89598.1| RNA polymerase II, second largest subunit [Borag...   181   6e-44
emb|CAD89877.1| RNA polymerase II, second largest subunit [Phila...   181   6e-44
emb|CAD88980.1| DNA-directed RNA polymerase subunit B [Vicia sat...   181   6e-44

>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 257  VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 78
            VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD
Sbjct: 958  VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 1017

Query: 77   VTVDNISKALHKCGYQMRGFETMYN 3
            VTVDNISKALHKCGYQMRGFETMYN
Sbjct: 1018 VTVDNISKALHKCGYQMRGFETMYN 1042


>gb|AAC08937.1| RPB140 [Chloranthus spicatus]
          Length = 533

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 78
           VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD
Sbjct: 419 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 478

Query: 77  VTVDNISKALHKCGYQMRGFETMYN 3
           VTVDNISKALHKCGYQMRGFETMYN
Sbjct: 479 VTVDNISKALHKCGYQMRGFETMYN 503


>emb|CAD89598.1| RNA polymerase II, second largest subunit [Borago officinalis]
          Length = 355

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 78
           VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD
Sbjct: 216 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 275

Query: 77  VTVDNISKALHKCGYQMRGFETMYN 3
           VTVDNISKALHKCGYQMRGFETMYN
Sbjct: 276 VTVDNISKALHKCGYQMRGFETMYN 300


>emb|CAD89877.1| RNA polymerase II, second largest subunit [Philadelphus sp. Oxelman
           2326]
          Length = 320

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 78
           VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD
Sbjct: 215 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 274

Query: 77  VTVDNISKALHKCGYQMRGFETMYN 3
           VTVDNISKALHKCGYQMRGFETMYN
Sbjct: 275 VTVDNISKALHKCGYQMRGFETMYN 299


>emb|CAD88980.1| DNA-directed RNA polymerase subunit B [Vicia sativa]
          Length = 401

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 78
           VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD
Sbjct: 216 VGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD 275

Query: 77  VTVDNISKALHKCGYQMRGFETMYN 3
           VTVDNISKALHKCGYQMRGFETMYN
Sbjct: 276 VTVDNISKALHKCGYQMRGFETMYN 300