BLASTX nr result

ID: Cnidium21_contig00018193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018193
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...   423   e-116
ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP...   416   e-114
ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   410   e-112
ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   408   e-111
emb|CBI31619.3| unnamed protein product [Vitis vinifera]              408   e-111

>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
            gi|223536498|gb|EEF38145.1| Serine/threonine-protein
            kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  423 bits (1088), Expect = e-116
 Identities = 215/328 (65%), Positives = 240/328 (73%)
 Frame = -1

Query: 1185 EMEEEKRDKMVYMWGYLPGASPQRSPLLSPVEVALPPASGAGSKWKDVCGGGCGFAMALS 1006
            +MEE  ++K+V+MWGYLPGA PQRSP+LSPV V        G  WKDVCGGGCGFAMA+S
Sbjct: 10   KMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVRAD-----GYSWKDVCGGGCGFAMAIS 64

Query: 1005 DSGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPIEASIAKAAAGWAHCVSATESGEVYT 826
            +SGKLITWGSTDDLGQSYVTSGKHGE PEPFPLP EASI KAAAGWAHC++AT++GEVYT
Sbjct: 65   ESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDTGEVYT 124

Query: 825  WGWKECVPSGKVIEDPTVGSRLDKDVVEQQGSLLTEQVSPRXXXXXXXXXXXXXXXXXXA 646
            WGWKEC+PSGKV  DP+V    +KDV E+    LTEQVSPR                   
Sbjct: 125  WGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPR-SQSSRSTGGIDGRGSGDE 183

Query: 645  NAKRRRVSSAKQAAESSATADEPLSALPCLVTLSPGVRIATVAAGGRHTLALSDXXXXXX 466
            + KRRR+SSAKQ+AESS++ DE LSALPCLVTL+PGVRI TVAAGGRHTLALSD      
Sbjct: 184  STKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDIGQVWG 243

Query: 465  XXXXXXXXXXXGSRIRMVSSPHPVPCIDSSPLGKDXXXXXXXXXXXXXXEGCRVPGSYVR 286
                       GSRIRMVSSPHPVPC+D S  GKD               G RVPGSYV+
Sbjct: 244  WGYGGEGQLGLGSRIRMVSSPHPVPCVDPS-YGKDRPAPFSRGGMTSEGHGFRVPGSYVK 302

Query: 285  GIACGGRHSAVITDAGAILAFGWGLYGQ 202
            GIACGGRHSAVITDAGA+L FGWGLYGQ
Sbjct: 303  GIACGGRHSAVITDAGALLTFGWGLYGQ 330


>ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
            vinifera]
          Length = 484

 Score =  416 bits (1070), Expect = e-114
 Identities = 216/328 (65%), Positives = 239/328 (72%), Gaps = 3/328 (0%)
 Frame = -1

Query: 1176 EEKRDKMVYMWGYLPGASPQRSPLLSPVEVALPPASGAGSKWKDVCGGGCGFAMALSDSG 997
            E  R+K+V+M GYLPGA PQRSPLLSP+ V  P +  A   W+DVCGGGCGFAMA+S+SG
Sbjct: 15   EGVREKLVFMMGYLPGALPQRSPLLSPIAVRSPASIHA---WRDVCGGGCGFAMAISESG 71

Query: 996  KLITWGSTDDLGQSYVTSGKHGETPEPFPLPIEASIAKAAAGWAHCVSATESGEVYTWGW 817
            KLITWGSTDDLGQSYVTSGKHGETPEPFPLP EASI KAAAGWAHC S TE+GEVYTWGW
Sbjct: 72   KLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGW 131

Query: 816  KECVPSGKVIEDPTVGSRLDKDVVEQQGSLLTEQVSPR---XXXXXXXXXXXXXXXXXXA 646
            KECVPSGKV  DP+VG  L+KDV E+Q S LTEQVSPR                      
Sbjct: 132  KECVPSGKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEE 191

Query: 645  NAKRRRVSSAKQAAESSATADEPLSALPCLVTLSPGVRIATVAAGGRHTLALSDXXXXXX 466
            + KRRR+ S+KQAAESS + DE LSALPCLVTL+PGVRIA VAAGGRHTLALSD      
Sbjct: 192  STKRRRMLSSKQAAESS-SGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWG 250

Query: 465  XXXXXXXXXXXGSRIRMVSSPHPVPCIDSSPLGKDXXXXXXXXXXXXXXEGCRVPGSYVR 286
                       GSRIRMVSSPHPVPC++SS  GK+              +  RVPGSYV+
Sbjct: 251  WGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVK 310

Query: 285  GIACGGRHSAVITDAGAILAFGWGLYGQ 202
             IACGGRHSAVITDAGA+L FGWGLYGQ
Sbjct: 311  WIACGGRHSAVITDAGALLMFGWGLYGQ 338


>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
            max]
          Length = 480

 Score =  410 bits (1055), Expect = e-112
 Identities = 210/328 (64%), Positives = 240/328 (73%)
 Frame = -1

Query: 1185 EMEEEKRDKMVYMWGYLPGASPQRSPLLSPVEVALPPASGAGSKWKDVCGGGCGFAMALS 1006
            EME EK +++VYMWGYLPGA PQR+PLL+PV V +PP+   G  WKDVCGGGCGFAMA+S
Sbjct: 12   EMEIEK-ERLVYMWGYLPGALPQRTPLLTPVLVRVPPS---GYSWKDVCGGGCGFAMAIS 67

Query: 1005 DSGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPIEASIAKAAAGWAHCVSATESGEVYT 826
            + GKLITWGSTDDLGQSYVTSGKHGE PEPFPLP E +I KAAAGWAHCVS T+ GEVYT
Sbjct: 68   EPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYT 127

Query: 825  WGWKECVPSGKVIEDPTVGSRLDKDVVEQQGSLLTEQVSPRXXXXXXXXXXXXXXXXXXA 646
            WGW+ECVPSGKV  +   G   +KDV  +Q S LTEQVSPR                   
Sbjct: 128  WGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPR-SQGSKSTGGTASGTSGEE 186

Query: 645  NAKRRRVSSAKQAAESSATADEPLSALPCLVTLSPGVRIATVAAGGRHTLALSDXXXXXX 466
            ++KRRRVSSAKQ AE+S+++D+  +ALPCLVTL+PGVRIA+VAAGGRHTLALSD      
Sbjct: 187  SSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWG 246

Query: 465  XXXXXXXXXXXGSRIRMVSSPHPVPCIDSSPLGKDXXXXXXXXXXXXXXEGCRVPGSYVR 286
                       GSRIRMVSSPH VPCI+SS  GKD              +  RVPGSY++
Sbjct: 247  WGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLARGSMSSDGQNFRVPGSYIK 306

Query: 285  GIACGGRHSAVITDAGAILAFGWGLYGQ 202
            GIACGGRHSAVITDAGA+L FGWGLYGQ
Sbjct: 307  GIACGGRHSAVITDAGAVLTFGWGLYGQ 334


>ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
            gi|449516435|ref|XP_004165252.1| PREDICTED: E3
            ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score =  408 bits (1049), Expect = e-111
 Identities = 206/331 (62%), Positives = 242/331 (73%), Gaps = 4/331 (1%)
 Frame = -1

Query: 1182 MEEEKRD-KMVYMWGYLPGASPQRSPLLSPVEVALPPASGAGSK-WKDVCGGGCGFAMAL 1009
            MEE+ +D K+V+MWGYLPGA PQRSPLLSPV V LP      +  W+DVCGGGCGFA+A+
Sbjct: 15   MEEDVKDNKIVFMWGYLPGALPQRSPLLSPVVVRLPGKDATDAHGWRDVCGGGCGFAVAI 74

Query: 1008 SDSGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPIEASIAKAAAGWAHCVSATESGEVY 829
            S +GKLITWG+TDDLGQSYVTSGKHGETPEPFPLP EASI KAAAGWAH V+ T+ GEVY
Sbjct: 75   SANGKLITWGATDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHTVAITDRGEVY 134

Query: 828  TWGWKECVPSGKVIEDPTVGSRLDKDVVEQQGSLLTEQVSPR--XXXXXXXXXXXXXXXX 655
            TWGWKECVPSGK+  D + G+  ++DV+E+Q S + +QVSPR                  
Sbjct: 135  TWGWKECVPSGKMFTDLSAGAAYERDVLERQSSSVIDQVSPRLQASRSSGVVSSIEARAG 194

Query: 654  XXANAKRRRVSSAKQAAESSATADEPLSALPCLVTLSPGVRIATVAAGGRHTLALSDXXX 475
               + KRRRVSSAK AAESS+++DE LSA+PCLVTL+PGVRI +V+AGGRHTLALSD   
Sbjct: 195  GAESTKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSVSAGGRHTLALSDMGQ 254

Query: 474  XXXXXXXXXXXXXXGSRIRMVSSPHPVPCIDSSPLGKDXXXXXXXXXXXXXXEGCRVPGS 295
                          GSRIRMVSSPHP+PCI+SS  GKD              +G R+PGS
Sbjct: 255  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSSFGKDRSAALARGSASLEGQGSRIPGS 314

Query: 294  YVRGIACGGRHSAVITDAGAILAFGWGLYGQ 202
            YV+GIACGGRHSA +TDAGA+L FGWGLYGQ
Sbjct: 315  YVKGIACGGRHSAAVTDAGALLTFGWGLYGQ 345


>emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  408 bits (1048), Expect = e-111
 Identities = 212/319 (66%), Positives = 232/319 (72%), Gaps = 3/319 (0%)
 Frame = -1

Query: 1149 MWGYLPGASPQRSPLLSPVEVALPPASGAGSKWKDVCGGGCGFAMALSDSGKLITWGSTD 970
            M GYLPGA PQRSPLLSP+ V  P +  A   W+DVCGGGCGFAMA+S+SGKLITWGSTD
Sbjct: 1    MMGYLPGALPQRSPLLSPIAVRSPASIHA---WRDVCGGGCGFAMAISESGKLITWGSTD 57

Query: 969  DLGQSYVTSGKHGETPEPFPLPIEASIAKAAAGWAHCVSATESGEVYTWGWKECVPSGKV 790
            DLGQSYVTSGKHGETPEPFPLP EASI KAAAGWAHC S TE+GEVYTWGWKECVPSGKV
Sbjct: 58   DLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPSGKV 117

Query: 789  IEDPTVGSRLDKDVVEQQGSLLTEQVSPR---XXXXXXXXXXXXXXXXXXANAKRRRVSS 619
              DP+VG  L+KDV E+Q S LTEQVSPR                      + KRRR+ S
Sbjct: 118  FGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRRMLS 177

Query: 618  AKQAAESSATADEPLSALPCLVTLSPGVRIATVAAGGRHTLALSDXXXXXXXXXXXXXXX 439
            +KQAAESS + DE LSALPCLVTL+PGVRIA VAAGGRHTLALSD               
Sbjct: 178  SKQAAESS-SGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQL 236

Query: 438  XXGSRIRMVSSPHPVPCIDSSPLGKDXXXXXXXXXXXXXXEGCRVPGSYVRGIACGGRHS 259
              GSRIRMVSSPHPVPC++SS  GK+              +  RVPGSYV+ IACGGRHS
Sbjct: 237  GLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHS 296

Query: 258  AVITDAGAILAFGWGLYGQ 202
            AVITDAGA+L FGWGLYGQ
Sbjct: 297  AVITDAGALLMFGWGLYGQ 315


Top