BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018189
         (2218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...   541   e-151
emb|CBI34953.3| unnamed protein product [Vitis vinifera]              536   e-150
dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]        498   e-138
ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   496   e-137
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   495   e-137

>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score =  541 bits (1393), Expect = e-151
 Identities = 304/522 (58%), Positives = 367/522 (70%), Gaps = 17/522 (3%)
 Frame = -1

Query: 1702 EEMRRLGKERLLLGDERRKLERNAEAVSSEMYTECQELLQMFGLPYIIAPMEAEAQCAFM 1523
            EEM  L +E L LGDE+RKLERNA+ VSSEM+ ECQELLQMFGLPYIIAPMEAEAQCA+M
Sbjct: 808  EEMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 867

Query: 1522 ELENLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYLMKDIEKELGLTREKLIRMALL 1343
            EL NLVDGVVTDDSDV LFGARSVYKNIFD+RKYVETY MKDIE ELGL REK+IRMALL
Sbjct: 868  ELANLVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALL 927

Query: 1342 LGSDYTEGVSGIGIVNAIEVINAFPEEDGLCQFREWIESPDPSILGKVVLPARSNLDETA 1163
            LGSDYTEGVSGIGIVNAIEV+N+FPEEDGL +FREW+ESPDP+ILGKV +   S+  +  
Sbjct: 928  LGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRG 987

Query: 1162 SKA----EDCSKSSLNCSSEGAVHG----PVDDLLKMKQHFMNKHRKVSKNWHIPSNFPS 1007
            SK     +  SK++++   E          VDD+   KQ FM+KHR VSKNWHIPS+FPS
Sbjct: 988  SKVGSGDQSHSKNNMDAFDENVSQNEHNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPS 1047

Query: 1006 QAVISAYDSPRVDKSTETFSWGKPDLFVLRKLCLEKFGWATQKADELLVPVLKEYNKHET 827
            + VISAY SP+VD+STE FSWGKPDLFVLRKLCLEKFGW  QKADELL+PVLKEYNKHET
Sbjct: 1048 ETVISAYASPQVDQSTEPFSWGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHET 1107

Query: 826  QLRMEAFYSFNEKFAKIRSKRIKEAVKLTRGDKSSGLMDDTMQGNSKGRKRRKVSSGQAG 647
            QLR+EAFY+FNE+FAKIRSKRIK+AVK   G ++S L+DD +Q  SK  KR K S  +  
Sbjct: 1108 QLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPSKLD 1167

Query: 646  SGEDVSISD--GLVAGHGSKSNEAATANHSRKKRIHKEPCTPEGRNSESMVQEVVRQ-NT 476
            + +++ I++     A +GS +    T   SR++RI K P   +G ++E  VQ   +Q N 
Sbjct: 1168 NKQEIPINEIGSTAARNGSNATAKTTPKQSRRRRIRK-PVPSDGESAEPPVQAGQKQCND 1226

Query: 475  NXXXXXXXXXXXXXXXXXXXXKVSSTL------ECAEVSSSDENDKDPLQDEPDGKNDRS 314
                                 +  S +      E +  SSSD N  +  ++ P  K D S
Sbjct: 1227 TGSSKNGRGKGRKKGRGVRRGRGRSRIQENPGSEISGTSSSDCNSGNE-EEVPAQKLDGS 1285

Query: 313  HQVRRSTRPRKAVMYAMNDSDDDELADASPDIGSSVDVGGKE 188
            ++VRRS RPRKAV YA +D + D       D G S+D G ++
Sbjct: 1286 NEVRRSKRPRKAVNYANDDLEID-------DEGKSLDQGNQK 1320


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  536 bits (1382), Expect = e-150
 Identities = 301/514 (58%), Positives = 360/514 (70%), Gaps = 9/514 (1%)
 Frame = -1

Query: 1702 EEMRRLGKERLLLGDERRKLERNAEAVSSEMYTECQELLQMFGLPYIIAPMEAEAQCAFM 1523
            EEM  L +E L LGDE+RKLERNA+ VSSEM+ ECQELLQMFGLPYIIAPMEAEAQCA+M
Sbjct: 768  EEMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 827

Query: 1522 ELENLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYLMKDIEKELGLTREKLIRMALL 1343
            EL NLVDGVVTDDSDV LFGARSVYKNIFD+RKYVETY MKDIE ELGL REK+IRMALL
Sbjct: 828  ELANLVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALL 887

Query: 1342 LGSDYTEGVSGIGIVNAIEVINAFPEEDGLCQFREWIESPDPSILGKVVLPARSNLDETA 1163
            LGSDYTEGVSGIGIVNAIEV+N+FPEEDGL +FREW+ESPDP+ILGKV +   S+  +  
Sbjct: 888  LGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRG 947

Query: 1162 SKAEDCSKSSLNCSSEGAVHGPVDDLLKMKQHFMNKHRKVSKNWHIPSNFPSQAVISAYD 983
            SK  +                 VDD+   KQ FM+KHR VSKNWHIPS+FPS+ VISAY 
Sbjct: 948  SKHNE----------------SVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYA 991

Query: 982  SPRVDKSTETFSWGKPDLFVLRKLCLEKFGWATQKADELLVPVLKEYNKHETQLRMEAFY 803
            SP+VD+STE FSWGKPDLFVLRKLCLEKFGW  QKADELL+PVLKEYNKHETQLR+EAFY
Sbjct: 992  SPQVDQSTEPFSWGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFY 1051

Query: 802  SFNEKFAKIRSKRIKEAVKLTRGDKSSGLMDDTMQGNSKGRKRRKVSSGQAGSGEDVSIS 623
            +FNE+FAKIRSKRIK+AVK   G ++S L+DD +Q  SK  KR K S  +  + +++ I+
Sbjct: 1052 TFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPSKLDNKQEIPIN 1111

Query: 622  D--GLVAGHGSKSNEAATANHSRKKRIHKEPCTPEGRNSESMVQEVVRQ-NTNXXXXXXX 452
            +     A +GS +    T   SR++RI K P   +G ++E  VQ   +Q N         
Sbjct: 1112 EIGSTAARNGSNATAKTTPKQSRRRRIRK-PVPSDGESAEPPVQAGQKQCNDTGSSKNGR 1170

Query: 451  XXXXXXXXXXXXXKVSSTL------ECAEVSSSDENDKDPLQDEPDGKNDRSHQVRRSTR 290
                         +  S +      E +  SSSD N  +  ++ P  K D S++VRRS R
Sbjct: 1171 GKGRKKGRGVRRGRGRSRIQENPGSEISGTSSSDCNSGNE-EEVPAQKLDGSNEVRRSKR 1229

Query: 289  PRKAVMYAMNDSDDDELADASPDIGSSVDVGGKE 188
            PRKAV YA +D + D       D G S+D G ++
Sbjct: 1230 PRKAVNYANDDLEID-------DEGKSLDQGNQK 1256


>dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1522

 Score =  498 bits (1281), Expect = e-138
 Identities = 300/609 (49%), Positives = 376/609 (61%), Gaps = 27/609 (4%)
 Frame = -1

Query: 1774 NFTEHSVMMAS---FKEQ---VEKQRANLKEEMRRLGKERLLLGDERRKLERNAEAVSSE 1613
            N  EH+  + S   F+E+   VE   AN++EE+R L +E + LGDE+RKLERNAE+VSSE
Sbjct: 905  NSNEHTFNIDSSTDFEEKGVPVEFSEANIEEEIRVLDQEFVSLGDEQRKLERNAESVSSE 964

Query: 1612 MYTECQELLQMFGLPYIIAPMEAEAQCAFMELENLVDGVVTDDSDVLLFGARSVYKNIFD 1433
            M+ ECQELLQ+FG+PYIIAPMEAEAQCAFME  NLVDG+VTDDSDV LFGARSVYKNIFD
Sbjct: 965  MFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDGIVTDDSDVFLFGARSVYKNIFD 1024

Query: 1432 DRKYVETYLMKDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVINAFPEEDGL 1253
            DRKYVETY MKDIEKELGL+R+K+IRMA+LLGSDYTEG+SGIGIVNAIEV+ AFPEEDGL
Sbjct: 1025 DRKYVETYFMKDIEKELGLSRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEEDGL 1084

Query: 1252 CQFREWIESPDPSILGKVVLPARSNLDETASKAEDCSKSSLNCSSEGAVHG-PVDDLLKM 1076
             +FREW+ESPDP+ILGK          +T SK +   + S +  ++G + G   DD  ++
Sbjct: 1085 QKFREWVESPDPTILGKTDA-------KTGSKVK--KRGSASVDNKGIISGASTDDTEEI 1135

Query: 1075 KQHFMNKHRKVSKNWHIPSNFPSQAVISAYDSPRVDKSTETFSWGKPDLFVLRKLCLEKF 896
            KQ FM++HRKVSKNWHIP  FPS+AVISAY +P+VD STE FSWGKPDL VLRKLC EKF
Sbjct: 1136 KQIFMDQHRKVSKNWHIPLTFPSEAVISAYLNPQVDLSTEKFSWGKPDLSVLRKLCWEKF 1195

Query: 895  GWATQKADELLVPVLKEYNKHETQLRMEAFYSFNEKFAKIRSKRIKEAVKLTRGDKSSGL 716
             W  +K DELL+PVLKEY K ETQLR+EAFYSFNE+FAKIRSKRI +AVK   G  SS +
Sbjct: 1196 NWNGKKTDELLLPVLKEYEKRETQLRIEAFYSFNERFAKIRSKRINKAVKGIGGGLSSDV 1255

Query: 715  MDDTMQGNSKGRKRRKVSSGQAGSGEDVSISDGLVAGHGSKSNEAATANHSRKKRIHKEP 536
             D T+Q   + R ++KV+  +    ED + SD        K +  A      K++  ++P
Sbjct: 1256 ADHTLQEGPRKRNKKKVAPHET---EDNNTSD--------KDSPIANEKVKNKRKRLEKP 1304

Query: 535  CTPEGRNSESMVQEVVRQNTNXXXXXXXXXXXXXXXXXXXXKVSSTLECAEVSSSDENDK 356
             +  GR                                        LE ++ SS D++D 
Sbjct: 1305 SSSRGRGRAQ-----------------------KRGRGRGRVQKDLLELSDGSSDDDDDD 1341

Query: 355  DPLQDEPDGKNDRSHQVRRSTRPRKAVMYAMNDSDDDELADASPDIGS------------ 212
            D +  E + K     +VR+STR R  VMY+    +DDEL ++  + GS            
Sbjct: 1342 DKVV-ELEAKPANLQKVRKSTRSRNPVMYSA--KEDDELDESRSNEGSPSENFEEVDEGR 1398

Query: 211  -----SVDVGGKELLANRVMGTAYRASDSELKHHESDHLLVEASSDIIPLGSEFC---QN 56
                 SVD    +  +   + T       E       HL  +A+ D   +G  FC     
Sbjct: 1399 IGNDDSVDASINDCPSEDYIQTGGGFCADEADEIGDAHLEDKATDDYRVIGGGFCVDEDE 1458

Query: 55   VAEVNICTD 29
             AE N   D
Sbjct: 1459 TAEENTMDD 1467


>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
            max]
          Length = 1707

 Score =  496 bits (1276), Expect = e-137
 Identities = 283/530 (53%), Positives = 350/530 (66%), Gaps = 36/530 (6%)
 Frame = -1

Query: 1711 NLKEEMRRLGKERLLLGDERRKLERNAEAVSSEMYTECQELLQMFGLPYIIAPMEAEAQC 1532
            +L+EEM+ LG+E + L +E+RKLERNAE+V+SE++TECQELLQMFGLPYIIAPMEAEAQC
Sbjct: 989  SLEEEMQILGQEYINLENEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQC 1048

Query: 1531 AFMELENLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYLMKDIEKELGLTREKLIRM 1352
            A++ELE LVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETY M+DIEKELGLTREKLIRM
Sbjct: 1049 AYLELEKLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRM 1108

Query: 1351 ALLLGSDYTEGVSGIGIVNAIEVINAFPEEDGLCQFREWIESPDPSILGKVVLPARSNLD 1172
            ALLLGSDYTEGVSGIGIVNAIEV+NAFPEEDGL +FR+W+ESPDP+ILG++   + SN  
Sbjct: 1109 ALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTILGRLDANSGSNSR 1168

Query: 1171 ETASKAEDCSKSSLNCSSEGAVHGPV----------DDLLKMKQHFMNKHRKVSKNWHIP 1022
            +  SK E+   SS     E AV   +          D + ++KQ F NKHR VSKNWHIP
Sbjct: 1169 KKGSKIEEKMNSSSCNVKESAVMQNICHAQEQNELSDYIQEIKQTFFNKHRNVSKNWHIP 1228

Query: 1021 SNFPSQAVISAYDSPRVDKSTETFSWGKPDLFVLRK------LCLEKFGWATQKADELLV 860
            S+FPS  VISAY SP VDKSTE F+WGKPD  VLRK      LC EKFGW  QKADEL++
Sbjct: 1229 SSFPSDTVISAYYSPHVDKSTEPFTWGKPDHLVLRKXVHMFRLCWEKFGWTGQKADELIL 1288

Query: 859  PVLKEYNKHETQLRMEAFYSFNEKFAKIRSKRIKEAVKLTRGDKSSGLMDDTMQGNSKGR 680
            PVLKEYNK ETQLR+EAFY+FNE+FAKIRSKRIK+AVK   G + S L+DD+ +  SK R
Sbjct: 1289 PVLKEYNKRETQLRLEAFYNFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAEEFSKSR 1348

Query: 679  KRRKVSSGQAGSGEDVSIS-----DGLVAGH------GSKSNEAATANHSRKKRIHKEPC 533
            K  +         ED+++      +G + G        S+ N+      S+KK+++ +P 
Sbjct: 1349 KTGR-------EPEDITLETSRGIEGNLEGRRKSKIKQSRKNDTVAKEQSKKKKVNDDPS 1401

Query: 532  TPEGRNSESMVQEVVRQNTNXXXXXXXXXXXXXXXXXXXXKVS--------STLECAEVS 377
            +  G +    +Q  ++                         +         S   C   +
Sbjct: 1402 SAPGTSEIENLQPSLQIEEEQHDGKALIRNRSGRGRGRIMGIKRGRDNKGLSFQSCETEA 1461

Query: 376  SSDENDKDPLQDEPDGKNDR-SHQVRRSTRPRKAVMYAMNDSDDDELADA 230
            SS  +D D     P    DR    VRRS R RK V Y+  + +D++  D+
Sbjct: 1462 SSGSSDID--DHGPRVHVDRVPKDVRRSMRSRKPVNYSFKEPEDEDSDDS 1509


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score =  495 bits (1275), Expect = e-137
 Identities = 297/596 (49%), Positives = 375/596 (62%), Gaps = 28/596 (4%)
 Frame = -1

Query: 1708 LKEEMRRLGKERLLLGDERRKLERNAEAVSSEMYTECQELLQMFGLPYIIAPMEAEAQCA 1529
            L+EE+  LG+ER+ LG E++KLERNAE+VSSEM+ ECQELLQMFGLPYIIAPMEAEAQCA
Sbjct: 934  LQEEILILGQERMNLGSEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 993

Query: 1528 FMELENLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYLMKDIEKELGLTREKLIRMA 1349
            +MEL NLVDGVVTDDSDV LFGAR+VYKNIFDDRKYVETY MKDIE+ELGLTREKLIRMA
Sbjct: 994  YMELANLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIERELGLTREKLIRMA 1053

Query: 1348 LLLGSDYTEGVSGIGIVNAIEVINAFPEEDGLCQFREWIESPDPSILGKVVLPARSNLDE 1169
            LLLGSDYTEG+SGIGIVNAIEV+NAFPEEDGL +FREWI SPDP+ILGK  L  R     
Sbjct: 1054 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLEKFREWIYSPDPTILGK--LDVRDGRSM 1111

Query: 1168 TASKAEDCSKSSL------NCSSEGAVHGPVDDLLKMKQHFMNKHRKVSKNWHIPSNFPS 1007
                  D + +++        S         D   +++Q FM+KHR VSKNWH+PS+FPS
Sbjct: 1112 RRKGESDSANNNVVDSFGKKVSESHKEEDSADHTQEIRQIFMDKHRNVSKNWHVPSSFPS 1171

Query: 1006 QAVISAYDSPRVDKSTETFSWGKPDLFVLRK------LCLEKFGWATQKADELLVPVLKE 845
            +AVISAY SP+VDKSTE F+WGKPDL VLR+      +C EKF W  QK+DELL+PVLKE
Sbjct: 1172 EAVISAYMSPQVDKSTEPFTWGKPDLHVLRRQVMIFIICWEKFAWGVQKSDELLLPVLKE 1231

Query: 844  YNKHETQLRMEAFYSFNEKFAKIRSKRIKEAVKLTRGDKSSGLMDDTMQGNSKGRKRRKV 665
            YNKHETQLR+EAFY+FNE+FAKIRS+RIK+A+K   G +SS +MDD ++ +SK RK+R +
Sbjct: 1232 YNKHETQLRLEAFYTFNERFAKIRSRRIKKALKGITGYQSSEMMDDDVKDSSKSRKKRTI 1291

Query: 664  SSGQAGSGE-DVSIS---DGLVAGHGSKSNEAATANHSRKKRIHKEPCTPEGRNSESMVQ 497
              G++   E D ++    +GL +   + S E +T   SR KR   +P   E  N    +Q
Sbjct: 1292 GPGESVDSEPDAALKREREGLFSDK-TDSLEKSTTKRSR-KRTAGQPVLTERENPGQHLQ 1349

Query: 496  EVVRQNTN--XXXXXXXXXXXXXXXXXXXXKVSSTLECAEVSSSDENDKDPLQDEPDGKN 323
               R+ T+                         S +E ++ S    +  D   +    K+
Sbjct: 1350 AEGRRKTHKGQCGDGRGKGRGRGRGRGRGRGKGSGIELSDSSYDYVSGDDDELEVRIEKS 1409

Query: 322  DRSHQVRRSTRPRKAVMYAMNDSDDDELADASPDIGSSVDVGGK-------ELLANRVMG 164
            +   ++RRSTR RK   Y ++            D+ S+VD G K       EL    V+G
Sbjct: 1410 EGPQELRRSTRSRKPANYTLD--------GFKVDVDSAVDRGDKQSNESAAELDLFGVIG 1461

Query: 163  TAYRAS---DSELKHHESDHLLVEASSDIIPLGSEFCQNVAEVNICTDHVILDQNG 5
             +  AS   + + +H   D L  + S D +  G               H + D NG
Sbjct: 1462 KSTDASSCLNGKEQHKVEDALPEDFSKDYLENG--------------QHCLTDDNG 1503